similar to: R_Libs in .Renviron?

I have a tiny R script performing two tasks, the first one of which may contain error. mammon(12)% cat z.R version options(show.error.messages = FALSE) try(b <- log("foo")) ## task 1 1 + 2 ## task 2 Running in batch mode from a solaries machine, the second task never got started; see below: mammon(13)% R BATCH --vanilla -q z.R mammon(14)% cat z.Rout >

I'd like to program a simulation of recurrent events to test few models in R. Is there anybody who has experience of that and could give me advice? Your help is greatly appreciated! Regards, -- Peggy Ramlau ramlau at gmx.de +493080906358 Bitte l?cheln! Fotogalerie online mit GMX ohne eigene Homepage!

Dear R-users, has anybody combined the glm function with the Newey-West estimator of variance, similar as in Stata 7.0? I'd like to estimate corrected standard errors within a logistic regression model, taking into account the auto-correlated binary observations within individuals. I use R1.5.1 on Mac OS X (10.2). Thanks, Christof

I downloaded geepack from your site and installed it from the zip file. However, although it appears under my library directory, I could not load into R. Regards John Sendak platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 1 minor 6.0 year 2002 month 10

I have a dataframe that I'm trying to reshape, and need advice. My data: > klam.merge[200:225,] stream lulc x sumlength pct.lgth 200 1223030419685 92 0.25000000 9.89 2.52780586 201 1223030419686 23 0.00274154 4.73 0.05796068 202 1223030419686 41 0.75009917 4.73 15.85833341 203 1223030419686 42 2.65000000 4.73 56.02536998 204

Where can I find a package with an R implementation of the S-Plus "nlmib" general minimzation routine described in Venables & Ripley's "Modern Applie Statistics with S-Plus", 3rd Ed., pp 267 - 270? Thanks, David Stamps stamps.d.a at att.net -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Dear R-help, I would like to be able to run the following code sequence as a source routine. If I paste it into R via the clipboard it works as expected, but if I source the code instead then the last 3 statements fail. I've also tried writing to the file in place of the sink sequence, but that also hits a snag. R 1.6, w98e2, dfr is a data frame containing the content of Julian

R : Copyright 2002, The R Development Core Team Version 1.5.1 (2002-06-17) > install.packages("O:/Rpack/mscalib.zip", .libPaths()[1], CRAN = NULL) updating HTML package descriptions Warning message: error -1 in extracting from zip file > install.packages("O:/Rpack/zzz.zip", .libPaths()[1], CRAN = NULL) updating HTML package descriptions Warning message: error -1 in

Hi! I am installing R in non standard directory. ./configure --prefix=/non/standard/directory The installation works fine. But after starting R i get .libPaths() /usr/lib/R/library but they cant be there of course! Have I to set some additional switches during config? Eryk Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel:

Dear List, Further to my earlier email, I note that, for me at least, R CMD check is *not* reading R_LIBS from ~/.R/check.Renviron on R 2.15.2 patched (r61228) and R Under Development (r61660). The only way I can get R CMD check to look for packages in a user-supplied library is by explicitly exporting R_LIBS set to the relevant directory. R CMD build *does* read R_LIBS from ~/.R/build.Renviron

Hi, I have Debian Testing running on a Lenovo Thinkpad X1 Carbon (2015, 3rd gen.). I would like to have a package library independent of the installed R version. Under Ubuntu, I used to have the following line in ~/.Renviron: R_LIBS=/usr/local/R/library:/usr/lib/R/site-library This worked fine and /usr/local/R/library showed up in .libPaths(). However, under Debian (with the same ~/.Renviron),

Hi, I am interested in customizing the installation of R. I have gone through the ?R Installation and Administration? manual. But some of the stuff is not clear to me and I would like to get clarifications on the following points (for a Windows installation with R_HOME=C:\\R\\R-2.9.1 ) : 1. I understand that I need to create a file, .Renviron with the following path : R_HOME\\etc\\.Renviron where

Dear Johannes, Dear Dirk, Thanks a lot for helping. Here is the missing information. Here is how I installed R. This is basically how Martin Maechler showed me to install R under Ubuntu (in several versions so that they are also recognized by ESS). My goal is to adjust this to make it work for Debian: 1) sudo emacs /etc/apt/sources.list # then add: deb

On Thu, Apr 2, 2015 at 5:49 AM, Johannes Ranke <jranke at uni-bremen.de> wrote: > Hi Marius, > > thanks for your reply. > >> > So maybe you could modify your instructions to the case where someone >> > wants to have R-devel in addition to the released R version, if that is >> > what you are aiming at? I could then add it to the README for Debian on

Dear Dirk, Dear Johannes, Thanks for helping, I could solve the problem. By reading your posts, I got a bit of the impression that questions beyond the 'standard installation' process are not really welcome on R-SIG-Debian. If this is the case, I'm sorry for my post. I wasn't aware of this, but Dirk makes it clear why on

On Tue, Mar 31, 2015 at 2:05 AM, Johannes Ranke <jranke at uni-bremen.de> wrote: > Dear Marius, > > thanks for sharing your thoughts on this. I am not very happy that you provide > instructions to install R 3.1.3 from sources when binaries are already > provided on CRAN. Dear Johannes, ... no one in his/her clear mind would go that way unless necessary. I have given reasons

Dear R-devel: i have noticed a little wrinkle in R packaging for RPM systems and have communicated with the package maintainer at RedHat Tom Callaway (see far below). Here is the question: Where does R Core Team want packagers to fiddle around with R library paths? Currently, the RPM Spec file used for EPEL's R (For Fedora/Redhat/Centos,etc) adds a line in R_HOME/etc/Renviron like this:

Hello, I'm adding a private library tree in my home directory by adding this to my ~/.Renviron: R_LIBS="~/R/library:${R_LIBS}" so that once in R: R> cat(Sys.getenv("R_LIBS"), "\n") ~/R/library:/usr/local/lib/R/site-library:/usr/lib/R/site-library:/usr/lib/R/library Is this the best way to proceed? Cheers, -- Sebastian P. Luque

Hi there, I'm in the following directory: ~/Documents/Rstuff/diceFiles/dice_1.1 The directory "dice" is in this directory, with all the usual build files (DESCRIPTION, NAMESPACE, etc). I'm trying to run the following command: R CMD check dice (where "dice" is the name of the package I'm checking), and I get the following: * checking package dependencies ...

Hi, R people. I'm shy reporting this, as a bug in this area sounds very unlikely. Did I make my tests wrongly? I'm still flaky at all this. Let me dare nevertheless, who knows, just in case... Please don't kill me! :-) Not so long ago, I wrote to this list: > (For now, [the library code] works only for me when I do _not_ use `-l > MY/OWN/LIBDIR' at `R CMD INSTALL'