Displaying 20 results from an estimated 3000 matches similar to: "nlme - Variance Estimation"
2004 Jun 11
0
New package: RUnit
We would like to announce the availability on CRAN of a new package: RUnit
It contains a unit testing framework strongly inspired by Javas popular
JUint package. In addition it contains some functionality to investigate
the degree to which some function is covered by a test suite.
The main aims of the package are
- to support a development style where test cases are written and
constantly
2004 Jun 11
0
New package: RUnit
We would like to announce the availability on CRAN of a new package: RUnit
It contains a unit testing framework strongly inspired by Javas popular
JUint package. In addition it contains some functionality to investigate
the degree to which some function is covered by a test suite.
The main aims of the package are
- to support a development style where test cases are written and
constantly
2002 Feb 21
2
Re: Factor analysis of categorical or mixed categorical/continuousdata in
I am looking to fit one or more latent categorical variables to data that is
a mixture of categorical and continuous variables. Factor analysis would
work for continuous data, latent class analysis for categorical data. I
understand that in a package such as MPlus I could perform a single analysis
of both data types. Are there similar routines available in R?
Stuart
-----Original Message-----
2009 Aug 06
0
Fitting Mixture of Non-Central Student's t Distributions
Dear Ingmar & Dave,
Thanks a lot for your help and sorry for the late reply.
Finally, I've found a way to separate the mixture of distributions
(empirically). But the gamlss package looks great, I'm sure it will help
me during my further studies.
Kind regards,
Susanne
On 15 Jun 2009, at 20:09, Ingmar Visser wrote:
> Dear Susanne & Dave,
>
> The gamlss package family
2010 Feb 27
2
scan and skip - without line breaks in the input file
Dear all,
I am trying to read in big amounts of data with scan. It's only one variable, numeric values, separated by tabs,.. and it's many of them. So I was thinking that I could use the skip option and read in 100000 values at a time - but skip doesn't work, probably because I don't have line breaks in the txt file. So any value specified for skip makes the scan function jump to
2009 Jun 13
1
Fitting Mixture of Non-Central Student's t Distributions
Dear all,
I am attempting to model some one-dimensional data using a mixture model
of non-central Student's t distributions. However, I haven't been able
to find any R package that provides this functionality.
Could there be a way to "manipulate" the EM algorithms from the mixdist
or mixtools package to fit the model, or do you have any other
suggestions?
If anyone could help
2009 Mar 03
1
R 2.9.0 devel: package installation with configure-args option
Hi,
trying
to install a package containing C code and requiring non-default configure argument
settings the incantation (this has worked for R <= 2.8.1 on the same architectures)
R CMD INSTALL --configure-args="--with-opt1 --with-opt2" packname
does always result in a warning
Warning: unknown option '--with-opt2'
and consequently the option is ignored. Reverting the order
2007 Apr 26
2
ifelse behaviour
Hi!
I'm puzzled by the return value of ifelse
consider
x<-integer(0)
ifelse(is(x, "character"), paste(x), x)
[1] NA
whereas
if (is(x, "character")) return(paste(x)) else x
[1] integer(0)
or
x<-integer(1)
ifelse(is(x, "character"), paste(x), x)
[1] 0
work as I had anticipated. Is this correct behaviour?
Regards,
Matthias
>sessionInfo()
R
2007 May 15
1
getNamespaceExports("base") error
Hi!
>getNamespaceExports("base")
Error in ls(NULL, all = TRUE) : using 'as.environment(NULL)' is defunct
getNamespaceExports
function (ns)
{
ns <- asNamespace(ns)
if (isBaseNamespace(ns))
ls(NULL, all = TRUE)
else ls(getNamespaceInfo(ns, "exports"), all = TRUE)
}
<environment: namespace:base>
One possible way to fix this could be
2009 Sep 01
1
R devel repository tarball naming issue
Hi,
we noticed that since some time after Aug 24th the daily snapshots provided on
ftp://ftp.stat.math.ethz.ch/Software/R/
no longer have their default tarball file name
but dropped the date stamp, i.e. R-devel_.tar.bz2
Same for R-patched snapshots.
Could one of the maintainers please take a look. We rely on the default naming convention
for automatic builds.
Regards,
Matthias
--
2004 Jul 21
1
Avoid return code 24 (file vanished) with command line option?
Hi!
Is it possible to avoid this error condition by specifying a command
line option? I haven't found an obvious one in the manual.
Background: We are using rsync for a live backup of our home
directories. Emails are stored in Maildir format within the
homedirectories. The rsync process is running for some time and in the
meantime emails get deleted because users still have IMAP access.
The
2009 Apr 16
1
R (2.9.0 rc) CMD INSTALL will leave OOLOCK folder even if installation succeeded
Hi,
since a couple of days ago I see failures when using
R CMD INSTALL -l lib path-to-src/pkg.tar.gz
This occurs in automated library updating via a shell script and is caused by the
immediate preceding call to leave an 00LOCK folder
even though the package installation of that call succeeded.
This occurs at random (no obvious/systematic correlation to package name or or such) and
only for
2009 Feb 20
0
Spearman-Karber method for toxicity data
Dear all,
I tried help.search("karber") and RSiteSearch("karber") and RSiteSearch("*karber*") to find whether the (trimmed) Spearman-Karber method for LD50 evaluation in toxicity data (e.g. according to Hamilton 1977) has been implemented in R. Or does this method feature under a different name? Of course logit and probit are doable, but Spearman-Karber seems to
2007 Mar 15
4
R 2.5.0 devel try issue in conjuntion with S4 method dispatch
Hi,
after updating R 2.5.0 devel yesterday we today observed many new
unexpected failures in our daily package build and test system runs,
which can be traced to recent changes in the implementation in try()
(as noted in NEWS).
Investigating this new implementation I come across an issue in
conjuntion with using S4 classes and methods. try(expr) does not return an
object with attribute
2006 Aug 31
1
S4 Method Dispatch for Sealed Classes
Hi,
I encounter a problem with method dispatch with S4 classes, using the
'sealed' parameter in setClass.
See that example below:
setClass("X",representation(x="numeric"),sealed=TRUE)
setGeneric("foo",function(x) standardGeneric("foo"))
setMethod("foo",signature("X"),function(x) print("foo(X)"))
x <-
2007 Sep 14
1
namespace prefix issue with avelsieve
Hi!
I am currently testing a setup with dovecot's lda, the cmusieve plugin,
pysieved and the avelsieve plugin for squirrelmail.
The issue I am stumbling upon is that avelsieve is generating folder
names including the namespace prefix when creating "fileinto" rules.
E.g.:
A rule:
If the header "Precedence" contains "bulk", then file it into
the folder
2007 May 30
1
dovecot scaling issue?
Hi!
We are running dovecot-imapd on Debian sarge out of the backports.org
packages (version 1.0.rc15-1~bpo1).
We have ~ 80 clients using secure IMAP.
I understand that imap-login has to run for every SSL connection. Thus I
already increased the max value for the number of imap-login processes.
But unfortunately dovecot is unresponsive from time to time. Where can
I tune the installation? Do I
2009 Oct 26
0
MLE for noncentral t distribution
Hi,
Actually I am facing a similar problem. I would like to fit both an ordinary (symmetric) and a non-central t distribution to my (one-dimensional) data (quite some values.. > 1 mio.).
For the symmetric one, fitdistr or funInfoFun (using fitdistr) from the qAnalyst package should do the job, and for the non-central one.. am I right to use
gamlss(x ~ 1, family=GT()) ?
Anyway, I am a little
2004 Mar 22
3
Long time needed for "Building file list" Any suggestions ?
We're running rsync 2.5.7 on a Windows2000 server, in combination with
cygwin/ssh. The server who receives the data is a Linux server.
The amount of data from the Windows server is about 100 Gb. Represented
by 532.000 files of different nature. Mostly doc, ppt and xls files.
It takes about 2 hours to create only the file list.
Is the amount of data/files to big, should I segmentate the
2012 Nov 27
0
Variance component estimation in glmmPQL
Hi all,
I've been attempting to fit a logistic glmm using glmmPQL in order to
estimate variance components for a score test, where the model is of the
form logit(mu) = X*a+ Z1*b1 + Z2*b2. Z1 and Z2 are actually reduced rank
square root matrices of the assumed covariance structure (up to a constant)
of random effects c1 and c2, respectively, such that b1 ~ N(0,sig.1^2*I) and
c1 ~