similar to: optimizing R-1.4.0 build on Solaris; a show-and-tell storry

This is something that I have not seen in earlier beta versions of 1.6.0: . . . ts.plot text html latex example ts.union text html latex example tsSmooth text html latex tsdiag text html latex example R_LIBS= ../../../bin/R CMD INSTALL ERROR: no packages

I got this wired behaviour of the attr() function using R-1.6.1 on both linux redhat 7.3 (i386) and Solaris 8 (Sparc): > tmp <- list(id=1) > > attr(tmp,"n.ch") <- 2 > attr(tmp,"n") <- 1 > tmp $id [1] 1 attr(,"n.ch") [1] 2 attr(,"n") [1] 1 > > attributes(tmp) $names [1] "id" $n.ch [1] 2 $n [1] 1 >

Dear R user, I try to build R-2.8.1 on SunOS 5.9, and use following command: CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v9" CXXFLAGS="-xO5 -xlibmil -dalign" FC="f95 -xarch=v9" FCFLAGS="-xO5 -xlibmil

I'm trying to find a good way of attaching a list within a function such that the attached variables (the list's members) precede the global environment (.GlobalEnv) in the search list. Here is a non-working example using attach(), which hopefully explains better what I'm trying to do: > foo <- function(x=0, input=list(a=10)) { + attach(input) + on.exit(detach(input)) +

Full_Name: rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5

Full_Name: Jeremy Fox Version: 1.5.0 OS: Solaris 8, 64 bit Submission from: (NULL) (171.64.232.63) I am compiling R under Solaris and the compilation stops at this point. The problem only happens when I link in readline. The R binary is actually compiled and readlne works. The main problem with the compiled binary (other than that all the supporting files were not correctly installed) is that

Hello, Apologies for the post here. I have read the R-Admin (learned a lot!) and searched the web for days, but still fail at compiling R on my Ultra 20 running solaris 10 x86 1/06. This is the tail of './configure' output: ..... checking for dlopen in -ldl... yes checking readline/history.h usability... no checking readline/history.h presence... no checking for readline/history.h... no

This might be because I didn't get it right, but; I thought R would release memory back to the system as (big) objects get removed? Here is my platform (with 1Gb of RAM): platform sparc-sun-solaris2.8 arch sparc os solaris2.8 system sparc, solaris2.8 status major 1 minor 3.1 year 2001 month 08 day 31 language R A little example: Start a new section of R, with

Using the 64-bit Solaris compilers make check dumps core in La_rs at 73 F77_CALL(dsyev)(jobv, uplo, &n, rx, &n, rvalues, work, &lwork, &info); I can't reproduce it easily, but example(eigen) occasionally stops with Error: abs(sm - V %*% diag(lam) %*% t(V)) < 60 * Meps is not TRUE which might be connected. The tiny rounding errors in example(eigen) aren't

System details: -------------- Sun Blade 1000, Solaris 8, Sun ONE Compiler Suite (rebranded Forte 7), R versions 1.6.0 and 1.6.2 - suspect others are affected, too Problem description: ------------------- Using the recommended env var setting from p.15 of the Admin Guide, the configure script fails the sgemm sunperf test, even though the sunperf libraries are available Not linking with

I have this 'odd' problem; I need to let R pause, for a given time, before starting next iteration in a loop. I'm using the following to do this task, but feel a little bit guilty because I'm using as much CPU time as I can get while pausing: while(keepGoing) { t.end <- proc.time()[3] + 5 ## the time this loop should end at [block of R commands] while(proc.time()[3]

Hello, Apologies for the post here. I have read the R-Admin (learned a lot!) and searched the web for days, but still fail at compiling R on my machine. This is the tail of './configure' output: ..... checking for dlopen in -ldl... yes checking readline/history.h usability... no checking readline/history.h presence... no checking for readline/history.h... no checking readline/readline.h

Hi All, I am having some problems with my R compile and matrix.c My config setings are:- setenv CC "cc -xarch=amd64" setenv F77 "f95 -xarch=amd64" setenv CXX "CC -xarch=amd64" setenv CFLAGS "-xO5 -xlibmil -dalign" setenv FFLAGS "-xO5 -xlibmil -dalign" setenv CXXFLAGS "-xO5 -xlibmil -dalign" setenv SHLIB_CXXLDFLAGS -lCstd setenv LDFLAGS

I have been trying out R-1.6.0 tarballs (2002-9-10 and 2002-9-17) on: arch sparc os solaris2.8 system sparc, solaris2.8 status beta major 1 minor 6.0 year 2002 month 09 day 17 language R As you see form above, R-1.6.0 compiles fine and works. However, when I "make fullcheck" I get the following error: running code in 'tools-Ex.R' ... OK

Hi, I am building a 64-bit R 2.0.1 on Solaris 9. The compiler is Sun Studio 8. Make was successful but I have a core dump during a make check. By the way, this problem also happens on my Solaris 8 machine though I did not get a core dump. I do not have 64-bit versions of the readline, tcl/tk, libncurses, etc libraries so these caused configure not to use them with ELFCLASS32 errors. I use

I've built a 64bit version of R 1.9.1 on a solaris 2.9 sparc system. Everything seems quite functional, except that readline produces the following: > configure:21277: checking for rl_callback_read_char in -lreadline > configure:21307: cc -xarch=v9 -o conftest -xO5 -xlibmil -dalign > -I/usr/local/include -L/us > r/local/lib conftest.c -lreadline -ldl -ltermcap -lm >&5

Im trying to do regressions with constraints that the weights are all >=0 and sum(weights) = 1. I've read the archive and have set the problem up with solve.QP and just the non-negativity constraints along the lines of: y as the data vector X as the design matrix D <- t(X) %*% X d <- t(t(y) %*% X) A <- diag(ncol(X)) b <- rep(0,ncol(X)) fit <-

I have been playing around with sparse matrices in the Matrix package, in particularly with the Cholesky factorization of matrices of class dsCMatrix. And BTW, what a fantastic package. My problem is that I have to carry out repeated Cholesky factorization of a spares symmetric matrices, say Q_1, Q_2, ...,Q_n, where the Q's have the same non-zero pattern. I know in this case one does

Hi, After reading some of the posting in this list, I came across this posting from: From: Peter Dalgaard <p.dalgaard_at_biostat.ku.dk> Date: Fri 29 Oct 2004 - 08:02:40 EST Replying to Re: [R] Errors during make check He described a problem similar to mine, that build 64-bit R (I am building R version 2.0.1) with sunperf library gives a core dump during make check. So I configured my

Thank you Brian Ripley, Gardar Johannesson, and Marcel Wolbers for your prompt and friendly help! I will share any further learnings as I move through these suggestions. -Bob Abugov Brian Ripley wrote: I just use optim() on the sum of squares with non-negativity constraints. That did not exist in 1999. Gardar Johannesson wrote: You can always just use the quadratic programing library in R