similar to: plotting (a) confidence intervals (b) standard error

Can anyone explain how best to go from a dataframe to a table (or better yet a new dataframe) of counts, where the row names in the new table (or dataframe) are the column names of the original df. start w/ DF1 = Pos1 Pos2 Pos3 .... oligo1 G C A oligo2 U U A oligo3 G C C oligo4 C G U oligo5 A A G ..... End with DF2 =

How do I allow traceroute to reach my server? Pings work fine but traceroute stops at the last hop before my server. If I shut off the firewall it reaches it fine. PING danicar.net (24.222.246.120): 56 data bytes 64 bytes from 24.222.246.120: icmp_seq=0 ttl=237 time=104.0 ms 64 bytes from 24.222.246.120: icmp_seq=1 ttl=237 time=74.9 ms 64 bytes from 24.222.246.120: icmp_seq=2 ttl=237 time=90.6

Here's another example of my plotmath whipping boy, the Normal distribution. A colleague asks for a Normal plotted above a series of axes that represent various other distributions (T, etc). I want to use vectors of equations in plotmath to do this, but have run into trouble. Now I've isolated the problem down to a relatively small piece of working example code (below). If you would

Dear all, I have a data frame in which the columns need to be ordered. The first column X is at the right position, but the remaining columns X1-Xn should be ordered like this: X1, X2, X3 etc instead of like below. > colnames(pos1) [1] "X" "X1" "X10" "X11" "X12" "X13" "X14" "X15" "X16"

R-Users, I am working with gplots (in gregmisc bundle) plotting some posterior probabilities (using barplot2) of harvest bag limits for discrete data (x-axis from 0 to 12, data is counts) and I ran into a couple of questions whose solutions have evaded me. 1) When I create and include the confidence intervals, the lower bound of the confidence intervals for several of the posterior probabilities

Hello everyone, I am currently working with some data where I need to select the first occurrence of a value after the occurrence of another value. The data has two columns, one with a time and one with occurence of certain events. The column of data I want to select from looks like this (and each of these events have a corresponding time in another column). Stat71 OutMag FirstResp InMag

Hi all, I'm actually learning how to use ogg, theora and vorbis. My idea is to create a small program running, that is able to concatenate ogg video+audio files. However I have some small questions. Here I will start with the first one: I read the following for seeking in ogg for a theora key-frame: ---- snipp (http://www.xiph.org/ogg/doc/ogg-multiplex.html) ---- [...]The third point

Hi everyone, I am desperately looking for a method to interpolate strings within an SQL statement as follows: I get a lot of rows out of a database (in my example POSITION_to_ZIPCODE Database with holds records for German ZIP Code <--> Gauss-Krueger Coordinate System ) and want this to be selected and computed individually row by row as follows: library(RODBC) channel <-

Hi, I need to draw hmm's in R.I also need to include a small plot near each state of the hmm.How can I do this? -- Rajesh.J [[alternative HTML version deleted]]

Hi there I'm trying to construct a model of mortality risk in 2D space that requires numerical integration of a hazard function, for which I'm using the integrate function. I'm occasionally encountering parameter combinations that cause integrate to terminate with error "Error in integrate... the integral is probably divergent", which I'm not sure how to interpret. The

Dear all, I'm trying to optimize code and want to avoid for-loops as much as possible. I'm applying a calculation on subvectors from a big one, and I get the subvectors by using a vector of starting positions: x <- 1:10 pos <- c(1,4,7) n <- length(x) I try to do something like this : pos2 <- c(pos, n+1) out <- c() for(i in 1:n){ tmp <- x[pos2[i]:pos2[i+1]]

I came across a problem when one of our clients was not able to access any of the servers on our network. This person has never connected to us before and now for this first time was trying to do it from his home is Houston, TX using earthlink cable service provided by Time Warner. All this information, I think, is important because when I started examining my shorewall logs I found out

Hi Im using the kinship package to draw a pedigree. On my data set this works fine but when i add indivudals to the pedigree i keep getting an error i hope someone can help me! This is the code im using: Data<-read.table("Tree.txt", header=T, sep=",") attach(Data) ped<-pedigree(id, dadid, momid, sex, aff) par(xpd=T) plot.pedigree(ped) This is my data looks like

This is a first draft of a subvolume quota implementation. It is possible to limit subvolumes and any group of subvolumes and also to track the amount of space that will get freed when deleting snapshots. The current version is functionally incomplete, with the main missing feature being the initial scan and rescan of an existing filesystem. I put some effort into writing an introduction into

Hello (Heinrich), I did not know I could do this. It doesn't seem to be documented anywhere. Thought this would be helpful to the fraction of the community using package R.oo. Note the call of a setMethodS3 method, xOne, in the setConstructorS3. This is extremely useful if xOne (in this case) is a very complex method (that you always want to be called every time you create a new object). If I

I am looking into supporting around 20 SIP clients (ATAs, IP softphones, etc) distributed in around 10 different end points (in South America). For the most part they all have narrow band connections 64kpbs, 128 at most and I?d like to use g729 all around (don?t have too many alternatives) To start with, I will have one * with no gateway to the PSTN and eventually a few * boxes with termination

We are wholesale supplier of DJ equipment here in Taiwan.We have various model in stock such as Guitar,Amps/Effects,Bass,Drums,Keyboards,Live Sound in stock.interested buyers should contact us at the below address yangmiaofenggear at yahoo.com yangmiaofenggear at hotmail.com Pioneer DJM 909 ...................$500USD PIoneer DJM 700 ...................$450USD Pioneer DJM 800

I search Google to find how to get the message light to flash on my Cisco 7960 running (Application Load ID POS3-06-3-00) (Boot Load ID PC03M030) (DSP Load ID PS03AT38) All I see is about the sip.conf file witch mine has the mailbox=XXXX but still no light. Also the messages button does not work. Any ideas?

Hi all, I am trying to use \Sexpr{} within \examples{} in the manual, and it all works fine, except that I get an error and then a NOTE from R CMD check when it checks for long lines in the manual. The long line check calls `Rd2txt` with fragment = TRUE, because it only checks the \usage{} and \examples{} sections, but fragment = TRUE does not evaluate \Sexpr{}, and then an unevaluated \Sexpr{}

Dear R-help list, I have a problem storing results from a bootstrap loop. What I doing is creating an empty matrix before the loop, then run the loop. Before the end of the loop I have a command line which defines which results inside the loop will have to go in the empty matrix. Here is the code I am using: eigen.values<-rep(NA,boots) #storage file for eigen values (1 for simulation)