similar to: predict.fda difficulties

We need to keep the discussion on the list. When I run your code, there are several problems. strain.data <- read.xlsx("Dee rhiz.xlsx", sheetName ="strain", header = T, row.names = 1) str(strain.data) # lists 9 columns at the end with all NAs strain.data1 <- (strain.data, sqrt.dist = TRUE) # this is not a valid R line. I get Error: unexpected ',' in

Here is an example of how to do it. > library(survival) > vfit <- coxph(Surv(time, status) ~ celltype + trt, data=veteran) > userinput <- data.frame(celltype="smallcell", trt = 1) > usercurve <- survfit(vfit, newdata=userinput) #the entire predicted survival curve > user2 <- summary(usercurve, time= 2*365.25) # 2 year time point > user2$surv [1]

Hello Sir I am getting problem in plotting in CCA . Could you please help me? I wrote the below command but I don't know why it is taking only first 5 env data rather than all 9. > strain.data <- read.xlsx("Dee rhiz.xlsx", sheetName="strain", header = T, row.names = 1) > env.data <- read.xlsx("Dee rhiz.xlsx", sheetName="env", header = T,

Hello all, I am a medical student and as a capstone for my summer research project I am going to create a simple online web "calculator" for users to input their relevant data, and a probability of relapse within 5 years will be computed and returned based on the Cox PH model I have developed. The issue I'm having is finding a definitive method/function to feed the user's

Hello R-help. I am trying to make a stacked barplot where the color of the sections of each bar depend on another variable. > myData[1:11,] score percent marker cellType Malignant 1 0 100.00000 ESR1 (ER) Bladder.M(5) TRUE 2 0 80.00000 PAX8 Bladder.M(5) TRUE 3 1 20.00000 PAX8 Bladder.M(5) TRUE 4 0 100.00000 ESR1 (ER) Brain.N(3) FALSE 5 0

Dear R-helpers I have a problem related to the use of NLME I think is simply a matter of getting the nlme coding correct, but i cannot get my brain around it I am analysing some 24 growth curves of some cells , and i wanted to say that there are significant differences between the curves in two parameters that describe the pattern of growth. these parameters are from a logistic (r & k)

Hi, I am new to model selection by coefficient shrinkage method such as lasso. And I became particularly interested in variable selection in Cox regression by lasso. I became aware of the coxpath() in R package glmpath does lasso on Cox model. I have tried the sample script on the help page of coxpath(), but I have difficult time understanding the output. Therefore, I would greatly appreciate if

Hi All, I have a data set containing : pclass: A factor giving the class of the passenger: one of 1st, 2nd, 3rd. age The age of the passenger in years. sex Passenger's gender: female or male age.group Passengers age group, one of 0?9 , 10?19, 20?29, 30?39, 40?49, 50?59, 60?69, 70?79 survived Passenger's survival (1=survived, 0=did not survive)

From: Ben Skeggs <bskeggs at redhat.com> The latter is deprecated, and will not be valid for newer clients. Signed-off-by: Ben Skeggs <bskeggs at redhat.com> --- nouveau/abi16.c | 32 +++++++++++++++----------------- nouveau/nouveau-symbol-check | 1 - nouveau/nouveau.c | 43 +++++++++++++++++++++---------------------- nouveau/nouveau.h | 1 -

Hello R-help group, I have a question about merging lists. I have two lists: Genes list (hSgenes) name chr strand start end transStart transEnd symbol description feature ENSG00000223972 1 1 11874 14412 11874 14412 DEAD/H box polypeptide 11 like 1DEAD/H box polypeptide 11 like 3DEAD/H box polypeptide 11 like 9 ;;

Hi, Problem Summary: I have been trying to add the highlight effect to my table but everytime a new record is added the highlighting gives an rjs error. However when i click the add to cart button on a product that already exists inside the table, the highlight effect works. Is this because the partial must only have only one <tr></tr> in it and the <table> must be on the other

Hi: I have made a lot of progress reading and manipulating large data files, thanks to the help of several of you. I am now stuck with writing the final file with the following error (see also the full transcript below): Error in as.matrix.data.frame(x) : length of dimnames[2] not equal to array extent I do not know what it means and could not find how to get around that in the manual nor

This hides all the abi16_* functions and the nouveau_debug variable, they should have been private to begin with. Signed-off-by: Maarten Lankhorst <maarten.lankhorst at canonical.com> --- nouveau/Makefile.am | 1 + nouveau/bufctx.c | 10 +++++----- nouveau/nouveau.c | 40 ++++++++++++++++++++-------------------- nouveau/private.h | 1 + nouveau/pushbuf.c | 20

Hi Ben, Someone came in to the channel to report that the outputs on the second gpu of the NVS 420 were not being detected properly. Emil tracked it down to the pclass == PCI_CLASS_DISPLAY_VGA check in nouveau_display that you added in e412e95a in order to avoid modesetting on Tesla cards. This can be worked around by specifying nouveau.modeset=1. I think it's a little ridiculous to require

From: Ben Skeggs <bskeggs at redhat.com> Because NVIF intentionally lacks some of the paths necessary to be compatible with various mistakes we've made over the years, libdrm needs to know whether a client has been updated and that it's safe to make use of the new kernel interfaces. Clients still using nouveau_device_open()/wrap() will be forced to make use of ABI16 instead of

v2: Check for PFIFO, don't pause if it's not yet running. This should fix reclocking on boot Signed-off-by: Roy Spliet <rspliet at eclipso.eu> --- drivers/gpu/drm/nouveau/Makefile | 1 + drivers/gpu/drm/nouveau/core/engine/device/nv50.c | 4 +- .../gpu/drm/nouveau/core/include/subdev/clock.h | 4 + drivers/gpu/drm/nouveau/core/subdev/clock/nvaa.c | 439

v2: Check for PFIFO, don't pause if it's not yet running. This should fix reclocking on boot v3: Tiny clean up Signed-off-by: Roy Spliet <rspliet at eclipso.eu> --- drivers/gpu/drm/nouveau/Makefile | 1 + drivers/gpu/drm/nouveau/core/engine/device/nv50.c | 4 +- .../gpu/drm/nouveau/core/include/subdev/clock.h | 4 +

Signed-off-by: Ilia Mirkin <imirkin at alum.mit.edu> --- nouveau/nouveau.c | 29 ++++++++++++++++++++++++++++- nouveau/private.h | 3 ++- 2 files changed, 30 insertions(+), 2 deletions(-) diff --git a/nouveau/nouveau.c b/nouveau/nouveau.c index ee7893b..72c31cf 100644 --- a/nouveau/nouveau.c +++ b/nouveau/nouveau.c @@ -85,6 +85,12 @@ nouveau_device_wrap(int fd, int close, struct

Based on the original patch by Ilia Mirkin. Handle races between nouveau_bo_name_get, nouveau_bo_prime_handle_ref and unreffing. Because DRM_IOCTL_GEM_CLOSE is not refcounted, some special care was needed by holding the lock during some ioctls. Signed-off-by: Ilia Mirkin <imirkin at alum.mit.edu> Signed-off-by: Maarten Lankhorst <maarten.lankhorst at canonical.com> --- ---

Hello, I am trying to run a linear regression analysis on my data set. For some reason most variables are removed due to singularities. My linear regression looks this way (I am using only partial data, which is selected by flags): fm<-lm(log(cplex6.time..sec..[flags]) ~ cplex6.cities[flags] + log(1/features.meanOver.frust[flags]) + log(1/features.meanOver.minDist[flags]) + [...]