Displaying 20 results from an estimated 8000 matches similar to: "configure file?"
2001 Jul 17
2
R-help archives after June 21 2001
Could someone please point me to a source for the archives of this news
group after June 21.
I was subscribed to a digest version, but it stopped arriving after that
date.
Anne
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Anne E. York
National Marine Mammal Laboratory
Seattle WA 98115-0070 USA
e-mail: anne.york at noaa.gov
Voice: +1 206-526-4039
Fax: +1 206-526-6615
2001 Aug 08
2
Library hdarray
Dear everybody!
I m seeking the package named hdarray for the analysis of microarrays
data.
It must not included in the base packages.
Thanks in advance.
Aboubakar Maitournam.
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2001 Dec 31
2
Extracting/setting elements from/in a matrix/array
Dear all,
I had to extracts/set elements from/in a matrix. Let say I have two
vectors dim1 and dim2 of indices in the respective two dimensions of a
matrix: I want to extract all the corresponding elements. I the case of a
nxn matrix, dim1 <- 1:n and dim2 <- 1:n would extract the diagonal.
I know one way would be to use the functions 'row' and 'col', but the
matrixes I
2003 Jul 15
2
Keeping track of occurrence of warning message
Hi there,
I am interested if there is anyway to keep track of the occurrence of
warning message.
I know that warnings will only be printed out at the end of the program
if warn=0. However I am also interested at which particular set of data
does the warnings occur too. This is because I am running 1000 data, so
if there are 2 or 3 data that give warnings, I would like to know which
are the ones
2001 Jul 16
2
Trouble with the memory allocation
Dear R-users,
I am currently facing what appears to be a strange thing (at least to my
humble understanding).
If I understood correctly, starting with the version 1.2.3, R memory
allocation can be done dynamically,
and there is no need to fiddle with the --nsize and --vsize parameter
any longer...
So far this everything seemed to go this way (I saw the size of my
processes growing when I was
2003 Mar 17
2
search function
Could any one tell me there is a search
function for R-help Archives?
Thanks
2001 Jul 17
1
vector angle
Hi everyone,
I'm translating into R some programs I worked through in Matlab to
calculate the angle between two vectors (very large--like 6200 rows in
each vector). In Matlab, I used a series of nested for loops, because I
was calculating the angles between many pairs of vectors. I know for
loops are not desirable in R code, so I was wondering if anyone could
recommend a faster way to
2001 Jul 26
1
dist - memory
Dear R friends,
Is there a formula for the amount of memory, that is needed by dist(), when
you know the number of columns and rows? Or is there at least an
approximation?
Thomas Pesl
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2001 Aug 20
1
Cave plots
Hi all,
Is there a way to compare time series using cave plots with R ?
Thank you for your time.
---------------------
Patrick Gonin
Responsable D?partement Evaluation in vivo
GENETHON III- CNRS URA 1923
1 bis, rue de l'Internationale
BP 60
91002 EVRY CEDEX
FRANCE
Tel: 33-1-69-47-10-21
Fax: 33-1-60-77-86-98
gonin at genethon.fr
---------------------
2001 Oct 18
1
object of class "dissimilarity"
R users,
Does anybody know how to convert a square matrix of distances (X^2
distances, actually) into an object of class "dissimilarity" so that the
cluster package can used it?
Thanks.
Jord? L?pez
Unv. Aut?noma de Barcelona
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2003 Mar 13
2
memory limit
Hi,
I get an error saying " Cannot allocate vector of size 71289kb". So I tried
to increase memory by memory.limit(size=3000000000), I also tried other
numbers. Each time I get the message NULL and then I still get the same
error as above. I'm using Windows 2000. The system has 1G RAM, and 1.6GHz
processor. I was only running R, and was trying to do use a BioConductor
package. I
2002 Jun 15
1
plot.hclust with lots of objects
Dear all,
the default plotting method for hclust trees looks just fine for few
objects like in the
example dataset. But when it comes to many objects (some 1000 - I'm
trying to visualize clustered microarray data) it renders a tree, that
one cannot inspect, because of overlapping text and lines. My question
is, is there a way or a plotting parameter for plotting a tree which is
wide enough
2001 Sep 27
1
multiple versions
Can anyone suggest a good way to handle multiple versions of R
and also other tools like gcc and perl (in Unix). I have been
using soft links from my personal bin to the version I want to
use, but this has some drawbacks. With this scheme it is
difficult to run different versions of R in different windows,
and use of gcc appears to be complicated in several respects when
I try to change among
2002 May 02
2
a question
Hi,
I have a program written in R which is good on the version 1.2, but for
the fallowing versions of R, an error always is at the same place.
That is at the level of the fallowing line:
Sur<-
getInitial(res2[m:M,2]~SSasymp(res2[m:M,1],Asymp,resp0,lrc),data=res2)
Error in eval(expr,envir,enclos):numeric envir arg not of length one
I don't know at all this langage for the instant.
2003 Sep 24
1
heatmap and hclust
Hi all,
The function heatmap uses the functions dist and hclust with default
parameters.
How to change these parameters? For example, i want to use the ward
criterion for hierarchical
clustering with binary distance.
Best regards,
Olivier.
2003 Mar 18
1
Building hdf5 for ms-windows
I am trying to build hdf5 for ms-windows. I downloaded the hdf5_1.4.7.tar.gz, gunzipped it and got a tar file. I extracted everything into a directory tree called hdf5. I also found a Makevars.win and libhdf5.def in the R help archives from March 2002. I put those two in hdf5 as well.
I issued the command Rcmd build --binary hdf5
but got this message complaining it can''t find
2002 Mar 05
3
location of maximum
Dear R-users,
I'm trying to extract the exact location of the maximum value in a
vector or a matrix, meaning I want not only the maximum itself but also
at which position (e.g row 6, column 12) it is located.
I appreciate any suggestions.
Thanks,
Patrick
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2003 Mar 18
3
Package installation when $RHOME is not writable (win)
I'm using R in a student lab with machines running win XP. $RHOME is not
writable by the students. How do I set this up so that they can install
packages?
Thanks,
Robert.
----
Robert King, Statistics, School of Mathematical & Physical Sciences,
University of Newcastle, Australia
Room V133 ph +61 2 4921 5548
Robert.King at newcastle.edu.au
2002 Jan 02
1
Combining files
Hi:
I am a very recent user of R 1.40 for MacOSX and went through the
help files but did not not find the function that I am looking for.
I have two comma separated files which I want to partly combine.
File 1 has 49670 lines and 26 columns (separated by commas) and looks
like this:
...
2002 Apr 24
2
Multiple frequencies
Hi!
I'm having a small problem with an assignment I have to do.
We want to do an anova on some values, given for four
different types of medicine. The different sample numbers are
not identical (eg for molecule A we have 8 values, for B we have
14, etc.).
What would the most elegant way of getting this info into R
to do an lm be? I usually try to use data.frames but R
categorically