Displaying 20 results from an estimated 20000 matches similar to: "strange results from tree()"
2000 Apr 04
2
customizing help()
Hi
I tried to customize help(), so it starts the compiled html help, and
searches in all packages.
I wrote the following function:
> my.help
function(topic){
help(topic, package=.packages(all=T), lib.loc=.lib.loc, chmhelp=T)
}
When I use it with
>my.help(help)
give the following error:
Error in help(topic, package = .packages(all = T), lib.loc = .lib.loc, :
No documentation
1999 Dec 06
1
Problems with X11 - device
I started the graphics device with X11(). When I tried to plot a tree object
with
> plot (tree)
It gives me the error message:
Error in plot.window(xlim, ylim, log, asp, ...) : invalid xlim
I was looking in the manual under "plot", "plot.window", etc. but I didn't
really get the resolution of my problem.....
What's the problem?
I'm runnig R on a SuSE 6.0
2000 Mar 20
1
ESS Compilation error
Im running R 0.99 on SuSE 6.3 with Linux 2.2.14 and Xemacs 21.1.
When I try to compile ESS the processes stops with an error message:
Making info file `ess.info' from `ess.texi'.
./newfeat.texi:3: itemize requires an argument: the formatter for @item.
./newfeat.texi:9: itemize requires an argument: the formatter for @item.
makeinfo: Removing output file
2009 Mar 20
1
Pruning trees in a Random Forest
Hi all!
The randomForest in R enables us to prune the trees using the nodesize
feature where we can stop splitting a node if it contains less than the
specified no.of of records/entities at that node.
However is there a way to stop the tree growing after a specified number of
levels. To be more clear on what I mean by a level. Level 0 is the parent
node, Level 1 has 2 daughter nodes, Level 2 has
2018 Jan 10
0
downloading only specific directories from directory tree
1. You don't appear to be including anything that is within the colon
dirs so they are being left out by --prune-empty-dirs.
2. Includes only override excludes that follow them. Since your debug
excludes are exceptions to the openSUSE_Leap_42.2/*** include they must
be before it not after it.
On 01/10/2018 05:46 PM, Istvan Gabor via rsync wrote:
> Dear Kevin:
>
> ~ 1 year ago
2009 Apr 01
1
Request: Optimum value of cost complexity parameter "k" in "tree" package
Dear R community
I have a question regarding the value of cost complexity parameter "k" used in "tree" package for pruning purpose. Any help in finding the optimum value of "k" is requested. Please give some suggestion in this regard. In the example below i used k=0 but i don't know why? But if i use k=NULL, then it will not plot the resultant tree.
2018 Jan 11
1
downloading only specific directories from directory tree
Thank you for your answer, Kevin.
2. OK, I understand.
1. I checked colon dirs, and indeed they don't have openSUSE_Leap_42.2
dirs directly. But they have different subdirs which have
openSUSE_Leap_42.2 dirs. What would be the correct filter set
to mirror all openSUSE_Leap_42.2 dirs at any level if I don't want
to include all dirs at the root level? At the roor level tehre are
many dirs
1999 Aug 06
0
FW: RE: First (well second) CODA hurdle problem
My reply seems not to have made it to either list 24 hours after
I sent it, so I'm sending it again. Apologies if you get this
twice (or 4 times if you're on both lists, or 6 times if you're John)
Martyn
-----FW: RE: [R] First (well second) CODA hurdle problem-----
Date: Thu, 05 Aug 1999 09:40:01 +0200 (CEST)
From: Martyn Plummer <plummer at iarc.fr>
To: John Logsdon
2005 May 22
1
CentOS4, KDE3.3 and 128 WEP
CentOS4 standard installation.
I see that KwifiManager doesn't support 128 bit WEP which I need for other
machines on the network, which is a bit of a blow - and rather surprising
really as security should be quite a consideration on an enterprise level
system (NB RH!).
Is there a workaround? An alternative way of configuring my Belkin
F5D6020 ver 2 card? eg a cvs download that I can get
2006 Sep 28
2
Perspective axes
Is there a way to get the axes labels for a persp() plot to show the
actual values employed? ticktype='detailed' only shows a scale from 0 to
1. My values are (for example) y in 0.2-0.7, x in 450-560 and I would
like to suppress the z labels.
How can I get the x and y values to appear on the plot?
R-2.3.1, Windows XP Home.
Best wishes
John
John Logsdon
2003 Sep 25
1
data lost in cv.tree?
Greetings -- I'm programming a data mining system
in R for protein structural data. As a seasoned
Perl and Python and Ada and ML, et al., programmer,
I am severely befuddled by the environment problem,
where data is not found in a 3rd level nested
function. I did peruse the parent frame not on the
search path idea, and came up with a hack which
kinda works, also below with the code which
2005 Aug 12
2
Firefox and Java on CentOS 4.1
I need to run a Java-enabled Firefox on my CentOS4.1-powered laptop and it
*was* running fine. Then yesterday I up2date'd the box and Firefox went
from 1.0.4 to 1.0.6. And I lost Java.
I can't seem to re-install it, whether from the original (1.5.0 I think it
was) or the latest downloads.
This is crucially important as I need to access my Dell RAC.
Can anyone advise how to get
2006 Jul 13
1
Extracting Phi from gls/lme
I am trying to extract into a scalar the value of Phi from the printed
output of gls or lme using corAR1 correlation. ie I want the estimate of
the autocorrelation. I can't see how to do this and haven't seen it
anywhere in str(model.lme).
I can get all the other information - fixed and random effects etc.
Is there an obvious way so that I can save the brick wall some damage?
TIA
2005 Sep 20
2
x86_64 rpms
I have just loaded up CentOS4.1 on a PE1850 with twin Intel x86_64's.
When I came to clean out those packages I didn't want (because some always
creep in however careful you are), apart from those with dependencies, I
notice a lot of cases where there are two packages of the same name
installed - one clearly an x86 package and one an x86_64 package.
eg apr
Is this intentional and if it
2006 Jan 16
1
lme output
I am trying to extract the solution from a simple lme calculation.
For example (the first 4 have a mean 0, sd 1):
> y<-c(-1.118,-.5,.5,1.118,10)
> gp<-factor(c(rep('one',4),'two'))
> res<-lme(y~1,rand=~1|gp)
Linear mixed-effects model fit by REML
Data: NULL
Log-restricted-likelihood: -8.67141
Fixed: y ~ 1
(Intercept)
4.962502
Random effects:
2006 Jan 18
2
Windows package upates
Dear list
Having just started to use the Windows version, I am very impressed with
it's package handling as well as the gui.
So I tried to see what was due for update and packages such as Hmisc,
Matrix and others came up.
But when I had updated them - which took a few goes as something hung
between here and Bristol - I noticed that the default packages such as
nmle, MASS had disappeared. I
2023 Aug 27
1
Issue with gc() on Ubuntu 20.04
On Sun, 27 Aug 2023 19:54:23 +0100
John Logsdon <j.logsdon at quantex-research.com> wrote:
> Not so although it did lower the gc() time to 95.84%.
>
> This was on a 16 core Threadripper 1950X box so I was intending to
> use library parallel but I tried it on my lowly windows box that is
> years old and got it down to 88.07%.
Does the Windows box have the same version of R
2005 Mar 29
1
regression tree xerror
I am running some models (for the first time) using rpart and am getting
results I don't know how to interpret. I'm using cross-validation to prune
the tree and the results look like:
Root node error: 172.71/292 = 0.59148
n= 292
CP nsplit rel error xerror xstd
1 0.124662 0 1.00000 1.00731 0.093701
2 0.064634 1 0.87534 1.08076 0.092337
3 0.057300 2
1999 Dec 06
0
Factor labeling in a tree.plot
Hi all.
I have the problem, that the labels from a factor variable in a tree
object, (more exact, the node - labels) is labeled in a plot with
letters a,b,c... instead of the numerical levels. when I run
>labels(tree.object)
It gives me the correct labels (the problem concerns 'landuse':
[1] "root" "landuse:1,2,3,4,5,6,7,8,9,10"
[3]
2018 Jan 10
2
downloading only specific directories from directory tree
Dear Kevin:
~ 1 year ago your answer helped me to solve my problem.
This time I would like to do a similar thing but little bit modified.
I read again carefully INCLUDE/EXCLUDE PATTERN RULES section of rsync
manual but still cannot comprehend every part of it.
I understand I have to add include patterns first and exclude patterns
second. But it is not clear if I have to add all the include