similar to: Unix R core dumps if $HOME is not set.

Full_Name: Murray Stokely Version: 2.10.1 OS: Linux Submission from: (NULL) (216.239.45.4) The Defn.h header includes limits.h for PATH_MAX and then checks if it hasn't been defined and if not sets something manually. Some of the R code uses PATH_MAX but a lot of other functions in unix/sys-unix.c and main/startup.c just hardcodes a limit of 256 characters. In my environment this is not

I get crashes when I call R without any arguments and having no environment variables R_PROFILE and RPROFILE. The reason is, that in unix/sys-common.c in R_OpenSiteFile() fopen is called with a null ptr as filename (because this is the outcome of getenv()). Although most compilers seem to interpret this as "file not found", this is an undefined behavior concerning to all C standards

Hi, Main objective: Let Rgui find my ~/.Rprofile and ~/.Renviron files, where ~ is equal to getwd("~"). I have few comments/questions: (A) On my WinXP Pro installation, the system environment variable 'HOME' is not availble to R, e.g. Sys.getenv("HOME") is empty. I believe this is default case (correct me if I'm wrong). However, if I set the "Start

https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=16660 Here is the bug, which R.home may generate a path contains a whitespace. this will cause Rcpp failed executing sourceCpp > sourceCpp("b:/2018-12-14/src/18020/MCMC.cpp") Error in system(cmd, intern = !showOutput) : 'D:/Program' not found Error in system(cmd, ignore.stderr = TRUE, intern = TRUE) :

The x11() window can be a nuisance to have popping up at startup (esp. on small screens) when you're not working with graphics. However, currently you can't get rid of it without modifying the systemwide Rprofile. Current logic is: Run $RHOME/library/Rprofile if ./.Rprofile exists run it else if $HOME/.Rprofile exists run that endif I think it should be Run $RHOME/library/Rsetup if

Douglas Bates wrote: >From 0.62 onward you should not have to create a symbolic link in >/usr/local/bin. It should be that you can run > cd $RSOURCE > ./configure --prefix=/usr/local > make install >and you will end up with the R script installed in /usr/local/bin and >all the files needed to run R in /usr/local/lib/R. > >Can you tell what the prefix is set to after

I'm trying to source a file automatically every time I start R. I tried adding the following .First function in a file Rprofile.site in my $R_HOME/etc/ directory (verified $R_HOME by Sys.getenv()) as well as in a file .Rprofile in my $HOME directory and .Rprofile in the working directory: .First <- function(){ source(file.path(Sys.getenv("HOME"), "R",

Hi everyone. I have recently installed R 2.14.1 on my 64-bit Windows 7 laptop. I am attempting to include some favourite functions in the Rprofile.site file to run at R start-up as I did with my previous 32-bit XP machine. I have edited the Rprofile.site file in "C:\Program Files\R\R-2.14.1\etc\" but the added code doesn't seem to be executed when I run R, whether through Tinn-R

On 25/08/2017 1:19 PM, Sam Albers wrote: > Hi there, > > I am trying to distinguish between getOption() and Sys.getenv(). My > understanding is that these are both used to set values for variables. > getOption is set something like this: option("var" = "A"). This can be > placed in an .Rprofile or at the top of script. They are called like this >

This only happens on platforms with a faulty implementation of realloc(). Some C libraries do not allow realloc() to be called with a NULL pointer to resize. The assignment ISOLatin1 <- 0:255 in Rprofile then causes a core dump. The attached set of 4 patches should be very safe to use and fix the problem. --please do not edit the information below-- Version: platform = i386-pc-sco3.2v4.2

Dear all. I am trying to install missing (not installed) packages during startup of R through code in Rprofile.site but I miserably failed and I am not sure what I am doing wrong. R is installed to C:Program files but it is not writable for the users, therefore I cannot change Rprofile.site located in root etc directory. I however can put Rprofile.site in users home directory (Documents)

Hi, I was be half asleep in the heat ... 2016-08-04 0:04 GMT+09:00 Dirk Eddelbuettel <edd at debian.org>: > > On 3 August 2016 at 16:45, Gordon Ball wrote: > | On 02/08/16 03:10, Ei-ji Nakama wrote: > | > Hi, > | > > | > Create /etc/profile.d/openblas.sh. > | > Write the following during in this file. > | > OPENBLAS_NUM_THREADS = 1 > | > export

ISSUE: It looks like Rgui.exe never processes ~/.Renviron - only ./.Renviron. REPRODUCIBLE EXAMPLE: On Windows, create the following ~/.Renviron and ~/.Rprofile files: C:\Users\alice> Rscript -e "cat('FOO=123\n', file='~/.Renviron')" C:\Users\alice> Rscript -e "cat('print(Sys.getenv(\'FOO\'))', file='~/.Rprofile')" and launch

I'm new to R, so apologies if the answer to my question is very obvious to everyone else! I use the carbon version of R (1.5.1), not the Darwin version. After a bit of a battle, I'm getting to grips with using R, and really getting to like it, but I'm still having trouble customising startup the way I'd like it. Reading ?Startup, I see that I can specify some commands to be run

Dear R-Helpers, I'm fiddling with my .Rprofile in Windows XP & R 2.7.0 Beta. I prefer to manually save my workspace but automatically save my command history via the .Rprofile. That is working fine once I found that "utils::" was required before the loadhistory & savehistory functions. What I would like to do is add a separator line with a date between the histories of each

Hi R-users, Since it has been already asked for several times, I would like to share my solution that I have gathered from several sources on internet for portable R+Emacs+MikTeX. This may also help some future R-users. My best, Ozan Installing R, MikTeX, Emacs (+auctex+aspell) on USB Useful information from: - http://at-aka.blogspot.com/2006/06/portable-emacs-22050-on-usb.html -

Hi, I had some trouble compiling the new R version on my Alpha: make[2]: Entering directory `/usr2/local/R/src/graphics' cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c gdevice.c cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c graphics.c cc: Error: graphics.c, line 808: An unexpected newline character is present in a string literal.

Hi, I had some trouble compiling the new R version on my Alpha: make[2]: Entering directory `/usr2/local/R/src/graphics' cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c gdevice.c cc -ieee_with_inexact -O -Olimit 2000 -I/usr/local/include -I../include -c graphics.c cc: Error: graphics.c, line 808: An unexpected newline character is present in a string literal.

Hello, when using Sys.getenv() during startup-phase (.First or .Rprofile) to get the env-variables COLUMNS as well as HOST I get empty strings. After the startup is done, when asking via Sys.getenv() by hand, COLUMNS is set (but HOST is not, even "hostname" on the shell gives me a correct answer). At the moment my problem is the missing COLUMNS value during start up, because I want

Dear R-devel, There seems to be a bug in the Startup section, regarding the R_PROFILE environment variable in Windows. If not a bug in the Startup itself, perhaps a bug in the documentation. According to ?Startup: Then R searches for the site-wide startup profile unless the command line option '--no-site-file' was given. The name of this file is