similar to: R-beta: command line editing?

Thanks very much Douglas for the pointer to nlm. Maybe the "Notes on R" maintainer can add at least a mention of nlm in the section on nonlinear fitting? I never did nonlinear fitting in S-Plus before, so I have nothing to unlearn, but I was hoping someone could show me how to do a least squares fit with nlm. example: x<-c(1,2,3,4,5,6) y<-.3*x^-.6 +.2 y<-y+rnorm(6,0,.01)

Thanks very much Douglas for the pointer to nlm. Maybe the "Notes on R" maintainer can add at least a mention of nlm in the section on nonlinear fitting? I never did nonlinear fitting in S-Plus before, so I have nothing to unlearn, but I was hoping someone could show me how to do a least squares fit with nlm. example: x<-c(1,2,3,4,5,6) y<-.3*x^-.6 +.2 y<-y+rnorm(6,0,.01)

I have a question on the use of return(). (Nothing on it in the docs I have) The test code below gives the error: Error: Object "x" not found when I do: thingy2(). How should it be fixed? Thanks very much for any help! (My original solution to this sort of problem was to use global variables x<<-... y<<-...) Bill Simpson ----------------------------- thingy<-function(k)

version .62: --------------------------------------------- > ?qpois The Poisson Distribution dpois(x, lambda) ppois(q, lambda) qpois(p, lambda) rpois(n, lambda) Arguments: x: vector of (positive) quantiles. p: vector of probabilities. n: number of random values to return. lambda: vector of positive means.

After some paper clipping problems I checked options() and saw that the default paper size was a4; I need US Letter. So as per instructions I uncommented the R_PAPERSIZE line in config.site, R_PAPERSIZE=letter Restarting R, everything is still the same though. I guess I have to reinstall? That seems awkward. Is there a way a prompt ("a4 or letter paper?") can be inserted in the

I am running R-0.61.1 on linux under X. If I kill the R Graphics window (click on X box in upper right corner), then subsequently do x11(), R crashes. I find that things only work the right way if I close the graphics window using dev.off(). I was wondering if maybe it could be arranged that closing the graphics window via click would seem to R to be equivalent to typing dev.off(). BTW thanks

Can someone please tell me to make a density histogram? hist makes one with count or relative frequency on the y-axis. I want the density, which is (rel freq)/(bin width) In the help I see: intensities: values f^(x[i]), as estimated density values. If `all(diff(breaks) == 1)', they are the relative frequencies `counts/n' and in general satisfy

This surprised me. Is it the way it is supposed to be? > x<-c(1,2,3,4,5) > y<-c(1.2,1.3,1.4,1.5,NA) > x-y [1] -0.2 0.7 1.6 2.5 NA > (x-y)^2 [1] 0.04 0.49 2.56 6.25 NaN >>>so NA^2 = NaN? Why not still NA? > sum((x-y)^2) [1] NaN >>>yes that is reasonable So if you ever have a data set with missing observations (NAs), you can't do any nlm() least

If I do fit<-lm(y~x) Is it possible to access the SE of the slope? (Analogous to getting the slope like this: fit$coef[2]) If not, it would be handy. (I want SE of 1/slope, and an approx way is fit$se[2]/(fit$coef[2]^2)) Thanks for any help. Bill Simpson -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

I tried to ?ms, ?nls and apparently these aren't implemented on R yet. However I seem to remember postings on this list having to do with fitting nonlinear models (no I don't mean GLM type fits, I have a REAL nonlinear model: y=ax^b + c). So please tell me if it is possible to fit nonlinear models in R (by least squares or ML). Thanks! Bill Simpson

I include the argument pty="s" to image, but still when I make an image by the method > postscript("rstuff/test.ps") > tauseq<-seq(0,1,.5) > cif2d.image(x,,y,tauseq) > dev.off() the image plot created is NOT square. I thought pty="s" would make it square. Generally it would be nice if the image saved to disk were like the one we see while in R

I'm having trouble un 'tar'ing the file ctest_0_9-3_tar.tar. When using the command "tar -xv" on a UNIX machine I get the "checksum error" message. When trying to use WinZip on a Win95 machine it gives an error reading the header. I'm downloading from the CRAN site at Carnegie Mellon. Could the file there be corrupted? Thanks for any help, and sorry if

I'm having trouble un 'tar'ing the file ctest_0_9-3_tar.tar. When using the command "tar -xv" on a UNIX machine I get the "checksum error" message. When trying to use WinZip on a Win95 machine it gives an error reading the header. I'm downloading from the CRAN site at Carnegie Mellon. Could the file there be corrupted? Thanks for any help, and sorry if

Questions on image: 1) How can I put labels on the x and y axes? 2) How to tell it to use e.g. 32 grey levels (not some colour map)? 3) How to know what the legend is (i.e. each grey level = what z value)? Thanks very much for any help. BTW I was wondering if persp was on the To Do list. That would be great! Bill Simpson

When I look at ppoints I see: ppoints<-function (x) { n <- length(x) if (n == 1) n <- x (1:n - 0.5)/n } However Venables & Ripley (2nd ed, p 165) say ppoints() should return (i-1/2)/n for n>=11; (i-3/8)/(n+1/4) for n<=10. The version below should work as described: ppoints<-function (x) { n <- length(x) if (n <= 10) (1:n - 0.375)/(n + 0.25) else (1:n - 0.5)/n

I do: x<-rnorm(1000) quantile(x,c(.025,.975)) 2% 98% -1.844753 1.931762 Since I want to find a 95% confidence interval, I take the .025 and .975 quantiles. HOWEVER R says I have the 2% (not 2.5%) and 98% (not 97.5%) points. Is it just rounding the printed 2% and 98%, or is it REALLY finding .02 and .98 points instead of .025 and .975? Thanks for any help. Bill Simpson

I do: x<-rnorm(1000) quantile(x,c(.025,.975)) 2% 98% -1.844753 1.931762 Since I want to find a 95% confidence interval, I take the .025 and .975 quantiles. HOWEVER R says I have the 2% (not 2.5%) and 98% (not 97.5%) points. Is it just rounding the printed 2% and 98%, or is it REALLY finding .02 and .98 points instead of .025 and .975? Thanks for any help. Bill Simpson

Here is a programming question. The code I am using is quite slow and I was wondering if there is a way to get rid of the for loop. I am dealing with "interaction" in 2x2 table, and am using Edwards's G_I (Likelihood, p. 194). I label the cells in the table as follows stim response "y" "n" total -------------------------------- y hit miss nsignal

I am using R Version 0.62.0 Unstable-snapshot (April 26, 1998) on Linux. I use the AfterStep window manager. Problem. Once upon a time, a workspace was saved. But at the end of this session, on quitting R I say "no", don't save workspace. On starting up, there are all the old objects again! I take it that the workspace is saved as ~/.RData. So is the only solution to manually rm

Question for R users under unix: Do you ever edit figs created by R using xfig or some other program? I tried to edit a figure with xfig (a program which I find quite horrible by the way) and it said it couldn't read it in. I guess xfig has no capability of reading postscript files? Can anyone tell me how to do it, or perhaps suggest another freeware structured drawing program for use in