similar to: R-beta: Survival 4

The new code seems to have broken various things. Autoloading of libraries doesn't seem to work: > library(survival4) Autoloading required library: splines Error in pos.to.env(pos) : invalid "pos" argument > search() [1] ".GlobalEnv" "library:survival4" "library:date" [4] "library:base" The coxph function the

The new code seems to have broken various things. Autoloading of libraries doesn't seem to work: > library(survival4) Autoloading required library: splines Error in pos.to.env(pos) : invalid "pos" argument > search() [1] ".GlobalEnv" "library:survival4" "library:date" [4] "library:base" The coxph function the

I have a function that generates data and tries to apply the survfit within it. I have tried: function(..){ x ..... survfit(Surv(tim,sts) ~ grp, data = x, envir = sys.frame(sys.parent())) } but I still get "Error: Object "x" not found". Is there a fix? (I use R-0.63.2 with the current survival4 package) Thanks E. S. Venkatraman

I reported bugs in "rhyper" and the TASKS.OLD file claims that they have been fixed. But R continues to get stuck (the prompt never comes back) if I use rhyper with N1, N2, n large, for example "rhyper(5,200,250,60)". E. S. Venkatraman (venkat at biosta.mskcc.org) =-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= r-help mailing list -- Read

ls.print produces error that I don't seem to be able to trace. Output of the commands as follows: (hyeung is a 24x2 matrix of data) ------------------------------------------------- > summary(hyeung) x.1 x.2 Min. : 28.0 Min. : 10.0 1st Qu.: 72.0 1st Qu.: 87.5 Median : 86.5 Median : 92.5 Mean : 81.0 Mean : 82.5 3rd Qu.: 97.0 3rd Qu.:100.0 Max.

ls.print produces error that I don't seem to be able to trace. Output of the commands as follows: (hyeung is a 24x2 matrix of data) ------------------------------------------------- > summary(hyeung) x.1 x.2 Min. : 28.0 Min. : 10.0 1st Qu.: 72.0 1st Qu.: 87.5 Median : 86.5 Median : 92.5 Mean : 81.0 Mean : 82.5 3rd Qu.: 97.0 3rd Qu.:100.0 Max.

Hi, I'm using the rsept for WINDOWS 95 (with modified men?, and "fixed" survival4). See the Ennapadam Venkatraman's example made in date 35/07/97 19.02 Ennapadam Venkatraman wrote: > library(splines) > library(survival4) > xx <- NULL > xx$ftim <- exp(-runif(100)) > xx$ctim <- 2*runif(100) > xx$sts <- 1*(xx$ftim <= xx$ctim) > xx$otim <-

Is this a feature/bug or am I missing something: R : Copyright 1999, The R Development Core Team Version 0.63.2 (January 12, 1999) ...... > ls() character(0) > x <- NULL > x$x1 <- rnorm(10) > x$x2 <- rnorm(10) > mode(x) [1] "pairlist" > as.data.frame(x) Error: can't coerce pairlist into a

I have built R-0.50-a4 on HP9000/C160-hpux10.2 with gcc (cc for libs). When I try library(survival4) Error in pos.to.env(pos) : invalid "pos" argument And it does not load. Other libs seem to work. I tested integrate (has f2c translated c), polynomial. Is this a problem with my system only??? TIA osman =-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=

I am using the 0.50 alpha version of R packaged (in 3 parts) by Kurt for Debian Linux. Package: r-base Status: install ok installed Priority: optional Section: local Maintainer: Kurt Hornik <Kurt.Hornik at ci.tuwien.ac.at> Version: 0.50b7-1 Depends: libc5, xlib6, libreadline2 Description: R, a language not entirely unlike the language S. Package: r-contrib Status: install ok

A cut and paste typo has crept in and is rendering all values returned for the hypergeometric distribution incorrect. The problem is in src/main/arithmetic.c in the function "math4". The lines PROTECT(sy = allocVector(REALSXP, n)); a = REAL(sa); b = REAL(sb); c = REAL(sc); d = REAL(sc); /* <-- change this line */ y = REAL(sy); should

Hi there, Here is a record of an R session: > library(survival4) Autoloading required package: splines > coxph(Surv(c(1,2,3,4), c(1,1,1,1)) ~ c(1,0,1,0)) Error in .C("coxfit2", iter = as.integer(iter.max), as.integer(n), as.integer(nvar), : C/Fortran function not in load table Why is "coxfit2" not in the load table? How do I fix it? System is Linux. Goran

Hmm... I have the same problem on hpux10.20. I put the additional libs into a subdir called contrib, and R INSTALL from there. I have R-0.61.1 Alpha Dec21 1997. Without restored data they work OK. Osman > ---------- > From: Goran Brostrom[SMTP:gb at stat.umu.se] > Sent: Tuesday, January 27, 1998 3:07 AM > To: r-help at stat.math.ethz.ch > Subject: R-beta: survival4 > >

================================================= This is an automated summary of the status of the R-bugs repository. Note that this may be neither complete nor perfectly correct at any given instance: Not all bugs are reported, and some reported bugs may have been fixed, but the repository not yet updated. Some bug fixes are difficult to verify because they pertain to specific hardware or

> Ennapadam Venkatraman <venkat@biosta.mskcc.org> writes: >> > x <- NULL >> > x$x1 <- rnorm(10) >> > x$x2 <- rnorm(10) >> > mode(x) >> [1] "pairlist" >> > as.data.frame(x) >> Error: can't coerce pairlist into a data.frame Fixed in 0.63.3

I would prefer not to; they already live in a protected namespace, so there is no need to mangle them except to protect them from exuberant preprocessor defines, and this would be slightly out of style with other public uses of enumerations in LLVM. - Daniel On Tue, Aug 25, 2009 at 7:49 AM, Venkatraman Govindaraju<venkatra at cs.wisc.edu> wrote: > Instead of just upcasing them, can we

On Sun, Feb 2, 2014 at 11:50 AM, Anton Korobeynikov <anton at korobeynikov.info> wrote: > That's really cool! Should we add note to Release Notes? Definitely. I will add a note mentioning about this in ReleaseNotes.rst. > > On Sun, Feb 2, 2014 at 8:05 PM, Venkatraman Govindaraju > <venkatra at cs.wisc.edu> wrote: >> Thanks to Jakob's work on Sparcv9 ABI in

Instead of just upcasing them, can we add prefix ARCH_? --Venkatraman On Tue, Aug 25, 2009 at 2:36 AM, Eric Christopher<echristo at apple.com> wrote: > > On Aug 25, 2009, at 12:32 AM, Daniel Dunbar wrote: > >> Hi, >> >> I think I should rename the constants to be a little less likely to >> collide. I think just upcasing them might be good enough? > >

I am trying to use the function "nlm" to find the mle. I want to use a generic function for the likelihood which would require me to use both the parameters and the data as arguments. But nlm requires the function to have only the parameters as arguments for this function (see example below). > testfun <- function(x,y) sum((x-y)^2) # x - parameters, y - data >

On Wed, Oct 26, 2011 at 1:59 AM, Chris Lattner <clattner at apple.com> wrote: > > Fantastic.  A great place to start would be to investigate / screen various sparc related bugs in bugzilla to see if they are still relevant and present: > http://llvm.org/bugs/buglist.cgi?quicksearch=sparc > > This bug looks pretty fatal if it is actually real: >