similar to: GPU packages and 'Debian R Policy'

I am building from source on RHEL 4 and have run into a problem while running "make check": running code in 'lapack.R' ...make[3]: *** [lapack.Rout] Error 1 make[3]: Leaving directory `/opt/R/R-2.9.1/tests' make[2]: *** [test-Specific] Error 2 make[2]: Leaving directory `/opt/R/R-2.9.1/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving

Dear Luke and others, I have many R versions on my machine and want to start a particular one when snow builds its cluster. (The same version I start snow from.) It seems that everything is set up correctly in defaultClusterOptions: > mget(ls(defaultClusterOptions), defaultClusterOptions) $homogeneous [1] TRUE $manual [1] FALSE $master nodename "maya.unil.ch" $outfile [1]

I'd like to make MikTeX the default TeX package in 2.2.0, but we still need to let people use other packages. The problem is that MikTeX wants a command line option --include-directory $R_HOME/share/texmf, while other packages specify includes via environment variables, and barf when they see the unexpected option. The choice should be controlled by the user's settings in the MkRules

Hello, Has anybody successfully called the Rmath library from C using the MS Visual Studio compiler (I am using Visual Studio 6.0)? I have compiled the Rmath library using gcc, and the 'test.c' program (which makes a call to qnorm) works fine when compiled with gcc. However, I get a fatal memory error when I run it after compiling it with Visual C. Would this memory problem be related

I put some documentation in a file dse/man/dse.Rd in and did R INSTALL -l rlibs dse This built the copies of dse.Rd in rlibs/dse/{help latex html}. It also wrote over R/doc/html/function.html and R/doc/html/packages.html, effectively clobbering all the R documentation. Also, the link that gets put in R/doc/html/packages.html points to R/library/dse/html/00Index.html rather than

In R 0.63 RINSTALL of a package with documentation still appears to clobber R/doc/html/function.html and R/doc/html/packages.html so the main help is no longer available to a user once a package is installed. I know how to work around this for my own purposes, but I hesitate to release a package that would do this to some unsuspecting user. Paul Gilbert

Dear r-helpers, I have been trying to invoke R from Java in a Windows 2000 computer (unfortunately). All my environment variables seem to be properly set, everything seems to be in order, but I obtaining a Fatal error: unable to open the base package error window. Also, the output of the invoker is Loading RInterpreter library R_HOME: R_HOME=C:/Programas/R RVersion: R_VERSION=1.6.1 whereas

Hi, I have a UNIX-Solaris-Sparc-Studio 11 compilers question. Since it's not exactly a programming question, I'm posting it here instead of to the developers list. Here's the relevant info: 1) I'm using SunOS 5.9 on a 32 bit machine without parallel processing. The chip is Sparc. 2) I've installed the Sun Studio 11 compilers. 3) I've successfully built and tested R 2.5.1

Hello, I have come across two separate packages that have a Makefile in inst/doc which use the R_HOME variable. In both cases, the path to R_HOME gets munged in such a way that commands that include R_HOME fail on Windows: For example, one Makefile, for the xmapcore package ( https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/xmapcore/username/password: readonly) has this:

Hi, I am facing a problem which i think i need to explain it to you with some background. I need to use the Project R pnorm function in Visual Basic 6.0. I have already installed R and this is how i perform and get back the result: > pnorm(2, 15) [1] 6.117164e-39 which is what i need. I have already installed R, i generated the Rmath.DLL file out so i can import it into my VB6 and use it.

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Hi, I'm programming with R 2.7.2 and had some trouble including Rmath.h for its random variates generation routines: Although I define R_NO_REMAP (which works fine for Rinternals.h stuff), Rmath.h defines "beta" as "Rf_beta" etc., so that my "beta" strings get redefined as well! Is this a feature? I found an old

Hi, I'ma having some troubles installing R under Unix. As it is written in the "how to install R" the ./configure passed on but when I type make I recieve this error message : gmake[1]: Entering directory `/usr/local/R_HOME/R-2.4.0/m4' gmake[1]: Nothing to be done for `R'. gmake[1]: Leaving directory `/usr/local/R_HOME/R-2.4.0/m4' gmake[1]: Entering directory

Ok, I try to explain the problem better: getHome() uses now "GetModuleFileName()" to determine the R home-directory. "GetModuleFileName()" doesn't check the R_HOME environment setting, instead it returns the path of the .EXE, that started R, which is usually located in $R_HOME/bin. If R is invoked via Java, "GetModuleFileName()" returns $JDK_HOME/jre/bin instead

Hello all, Just joined this mailing list -- not sure if this is the right list to send this question, but I have a question about cross-compiling R. I am working with R-1.9.1.tgz. It may just be with my version of mingw32, but it seems that expm1 is not defined, so I tried to ensure that HAVE_EXPM1 was #undef'ed before cross-compiling. The problem is that, in <include/Rmath.h> if

I'm very green with R, so maybe this is not a bug, but it looks like one to me. The following program segfaults at the second call to Rf_PrintValue(). To failure depends on the value of the y-string. E.g., if I change it from "coverage" to, say, "COVERAGE", the segfault does not occur. /* bug.c */ #include <stdio.h> #include <Rinternals.h> #include

I currently have R 2.12.1 installed, both 32 and 64 bit. I also have a file that was passed to me named rmath.dll. I do not know what version of R it was created from, but I do know it is 32-bit only. I am developing an application in C# that uses this library as a reference but I have to downgrade it to 32-bit in order to use the DLL file. I wish to make a rmath.dll from the version of R I have

Dear all, When installing the usual packages that I use, after installing R 3.0.1, I noticed that the installation of some packages that query R about its configuration did not succeed. The problem is exemplified by: berwin at bossiaea:~$ R-3.0.1 CMD config CC /opt/R/R-3.0.1/lib/R/bin/config: 222: .: Can't open /opt/R/R-3.0.1/lib/R/etc/Renviron Prior to R 3.0.1 such commands worked fine:

Hi, I'm running R-1.9.1 and I'm unable to succesfully install packages using either 'R CMD INSTALL xxx.tar.gz' or 'install.packages("xxx"). For example, if I try to install the msm package I get: R CMD INSTALL msm_0.4.1.tar.gz * Installing *source* package 'msm' ... ERROR: R_HOME ('/root/R-1.9.1') not found ERROR: installing package DESCRIPTION

Hi, Is the below -- setSeed -- an okay way to set the seed in standalone applications making use of Rlib? It seems to work as expected. Is there a better way to do it? (I'm also looking at do_setseed but am unsure what to supply as op. findFun("set.seed", R_GlobalEnv)?) Thanks much. -- David Faden, dfaden at iastate.edu AIM: pitulx -- #include <assert.h> #include

Hi, I want to use R_qsort_int_I() in my C function, but getting the following error. It looks like there is a conflict between Rmath.h, which I use to generate random numbers, and R_ext/Boolean.h I would appreciate any help to fix this problem. gcc -ansi -g -o Gibbs gibbs.c subroutines.o rand.o vector.o -lm -lRmath -llapack -lblas -lfrtbegin -lg2c -lm -shared-libgcc In file included from