similar to: ubuntu hardy heron and lme4

Hello. I am a Linux neophyte and know almost nothing ?about compiling, so I would appreciate any help and advice y'all would care to offer. I am trying to compile the 64 bit version of R using a tuned ATLAS and LAPACK (ATLAS 3.9.24). I am running Ubunto 10.04 LTS (through wubi, FWIW). The ATLAS and LAPACK files (atlas.so, f77blas.so, lapack.so, and cblas.so) are sitting in the folder

Subject: Re: [R-sig-Debian] ubuntu problem with 'r-cran-robustbase' [FWD Agustin Lobo] Date: Tue, 12 May 2009 13:30:49 +0200 From: Agustin Lobo <aloboaleu at gmail.com> Reply-To: aloboaleu at gmail.com To: Dirk Eddelbuettel <edd at debian.org> CC: Martin Maechler <maechler at stat.math.ethz.ch>, R-SIG-Debian at stat.math.ethz.ch References: <18953.17704.527898.355877

I am running R on Ubuntu Heron. I recently updated to R 2.8.0 from the default (2.6) in the Ubuntu heron repository by adding deb http://cran.stat.sfu.ca/bin/linux/ubuntu hardy/ I updated all packages installed in /usr/lib/R/site-library and those in my home directory /home/duncan/R/i486-pc-linux-gnu-library/2.6 without obvious issues. I installed adehabitat and gpclib, which should be good

I just dumped Vista off a laptop and installed Ubuntu 10.10 (latest release) as the single operating system. I did all of the updates and then installed emacs and ess. Next I installed R by following the the usual instructions on the CRAN site. At this point all is working I am now in the process of installing the packages that I normally have installed. I am having a problem with the LAPACK

Hi all, I have a C function, say Cfun, that calls Lapack's DGEMM routine and I need to create a shared library to use Cfun inside R. The C file is the following #include<stdio.h> #include<R.h> #include<R_ext/Lapack.h> void Cfun(double *res, double *X, int *n, int *q) { char *ptr_TRANSA, TRANSA='T', *ptr_TRANSB, TRANSB='N'; ptr_TRANSA=&TRANSA;

Hi All, Not a new R user, but new to R with Linux, specifically Ubuntu Hardy Heron 8.04 64bit. I have had success installing common packages using the typical R interface (in Linux), but have had problems installing less common packages like (rgdal) and (RSAGA) that are not loaded with R. I'm wondering if there are any tricks to these libraries that won't install, from reading the

Dear helpers, I am trying to create a library which uses some Fortran source files and Lapack and Blas subroutines. The Fortran source files from the original author contain subroutines isamax.f, sgefa.f and sgesl.f, which are part of BLAS subroutines on my Linux computer, but maybe different (old) versions. So in addition to these subroutines, there are other Lapack and Blas subroutines

Dear all, I have a problem to build a package on Windows XP while there is no problem on Linux. The Makefile is something like: ########### LIBNAME=cts PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) OBJS=file1.o ... file20.o -llapack -lblas $(LIBNAME)$(SHLIB_EXT): $(OBJS) $(SHLIB_LD) $(SHLIB_LDFLAGS) -o $@ $(OBJS) $(FLIBS) clean: @rm -f *.o *.$(SHLIB_EXT) realclean: clean

Dear all, I noticed that the r-base package for Ubuntu 8.04.1 do not have the tcltk support compiled in. Would it be possible to correct this? > echo "capabilities()" | R --no-save | tail -6 [Previously saved workspace restored] > capabilities() jpeg png tcltk X11 aqua http/ftp sockets libxml TRUE TRUE FALSE TRUE FALSE TRUE

R developers, I am trying to understand how symbols are resolved, so that I can configure a package that I contributed to, and so that I can provide guidance to (linux / OSX) users of the package. To be concrete, my package uses the LAPACK Fortran symbol zsysv. This is not in libRlapack, but is defined on my system in the library /usr/lib64/liblapack.so. * I suspect that the reason the symbol is

Dear All, As suggested in the reply from Dirk Eddelbuettel to my post to R-dev I am reposting here as the problem still persists. Please see my post to R-dev under same heading for additional description if needed. In summary I am starting from a new installation of Ubuntu 10.10 as the single operating system on a reformatted disk with just the OS, ESS and emacs installed before installing R

(I asked an earlier question on the rpy2 installation to the rpy2 list, the solution there was to edit the setup.py script, but this looks beyond what I can do unless someone tells me exactly what to modify). I have R 2.8.1 on 2 machines running ubuntu 8.04 (packages R-base and R-base-dev, among others, installed using Synaptic) and while the installation of rpy2 went fine on machine1, failed on

I am trying to run an old version of Family Tree Maker for Windows. I got it working on Ubuntu Gutsy Gibbon, but when I switched to Hard Heron it stopped working. Specifically when I use the file open dialog to select the database to open I am able to navigate through the Unix directory tree down to the file, but when I request the application to open the selected file I get an error message

I'm having a little problem launching Sim City 3000 on Hardy Heron 8.04, Wine 0.9.60. When I start the program i get the following message, in infinity, in the terminal: Code: fixme:d3d_surface:surface_convert_format Cannot find a conversion function from format WINED3DFMT_A8R8G8B8 to WINED3DFMT_X8R8G8B8 And when I close the application I get this message: Code:

Hi, I'd like to use ggplot2, which I think works best on some R release >=v2.11 or so. However, with Ubuntu Hardy Heron 8.04 LTS, 'aptitude' packages show me only a version for 2.6. Can I install more recent version on this Ubuntu version, and if so, what is the most painless way to do this (is there some way to use 'aptitude'? Can I download a binary? Do I have to

has anyone been able to get hardy and windows media player to work? ive tried to install it with the winetricks script preceding it with the install of ies4linux then copying it to the wine folder with these commands rm -rf ~/.wine/* cp -dpr ~/.ies4linux/ie6/* ~/.wine but it just doesn't work, any ideas would be great

Hi all Four questions regarding Unicode. Three Windows questions. I am using - a PC with Windows XP (Build 20600.xpsp080413-2111 (Service Pack 3); - the following R version: > R.version platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor 7.0 year 2008 month 04 day 22 svn

Hi All: Tried out a couple of different options suggested earlier, but for some reason I can only get Rcmdr to work properly. Not that that's a problem, but it might have been nice to have a couple of other choices. Just tried out JGR and ended up getting not found errors on several of the menu choices. Installed OK. Just several key menu options such as package manager don't work. Have

Hi All: Tried out a couple of different options suggested earlier, but for some reason I can only get Rcmdr to work properly. Not that that's a problem, but it might have been nice to have a couple of other choices. Just tried out JGR and ended up getting not found errors on several of the menu choices. Installed OK. Just several key menu options such as package manager don't work. Have

Hi, I am new to Linux and have a linux machine running ubuntu (hardy heron). I installed R 2.9.1 using the deb file provided on the R website. However I can't install 'affy' - one of the R packages and apparently this is because of the lib settings. I've tried to install R using the command line but I can't add: deb http://cran.uk.r-project.org/bin/linux/ubuntu hardy to my