similar to: New package for medical image registration: RNiftyReg

Dear all, There have been some recent major updates to the TractoR and RNiftyReg packages, which are available for medical image analysis applications. If you use R for these purposes, I hope you will find the updates useful. RNiftyReg is an image registration package, which provides a clean R-like interface to the NiftyReg library developed at University College London [1]. It is aimed at

Dear all, There have been some recent major updates to the TractoR and RNiftyReg packages, which are available for medical image analysis applications. If you use R for these purposes, I hope you will find the updates useful. RNiftyReg is an image registration package, which provides a clean R-like interface to the NiftyReg library developed at University College London [1]. It is aimed at

Dear all, The current version of my RNiftyReg package is failing to compile on CRAN's Solaris testbed, but I don't have access to a Solaris system to debug on, and Googling the error hasn't been very helpful. The error is CC -library=stlport4 -I/home/ripley/R/cc/include -DNDEBUG -DNDEBUG -DRNIFTYREG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -nofstore -c niftyreg.cpp

I have received the following error for my package oro.nifti under "CRAN checks" for r-devel-linux-ix86; i.e., http://www.r-project.org/nosvn/R.check/r-devel-linux-ix86/oro.nifti-00check.html - using R version 2.12.0 Under development (unstable) (2010-06-12 r52259) - using platform: i686-pc-linux-gnu (32-bit) - using session charset: UTF-8 - checking for file

The first release of oro.nifti (v0.1.3) is a bundle of functions and capabilities from the dcemriS4 package. * This package is able to read/write both NIfTI and Analyze data formats for medical imaging. * S4 classes are available and numerous methods exist to visualize and interact with these data formats. * NIfTI extensions are allowed both as input and output. * With the XML package installed

The first release of oro.nifti (v0.1.3) is a bundle of functions and capabilities from the dcemriS4 package. * This package is able to read/write both NIfTI and Analyze data formats for medical imaging. * S4 classes are available and numerous methods exist to visualize and interact with these data formats. * NIfTI extensions are allowed both as input and output. * With the XML package installed

The first release of oro.dicom (v0.2.4) is now available for download from CRAN. This is a major revision and improvement that replaces the previous DICOM package. New features include: * Increased speed * Uploading only header information (for restricted memory situations) * Reading implicit value representations (VR's) * Parsing SequenceItem tags (undefined lengths are allowed) *

The first release of oro.dicom (v0.2.4) is now available for download from CRAN. This is a major revision and improvement that replaces the previous DICOM package. New features include: * Increased speed * Uploading only header information (for restricted memory situations) * Reading implicit value representations (VR's) * Parsing SequenceItem tags (undefined lengths are allowed) *

Dear all, The "tractor.base" package has recently been added to CRAN. This package provides functions to read, write, visualise and manipulate magnetic resonance images. The standard Analyze, NIfTI and DICOM file formats are supported (read-only for DICOM), and all metadata is stored with the image data internally. The code can be used to visualise image slices or maximum intensity

Dear all, The "tractor.base" package has recently been added to CRAN. This package provides functions to read, write, visualise and manipulate magnetic resonance images. The standard Analyze, NIfTI and DICOM file formats are supported (read-only for DICOM), and all metadata is stored with the image data internally. The code can be used to visualise image slices or maximum intensity

Dear all, I recognise the reason for strongly discouraging use of printf() and similar C functions in R packages, but I wonder what people do in practice about third-party code which may be littered with such calls. I maintain a package (RNiftyReg) which provides an R interface to a third-party library which contains hundreds of calls to printf(...), fprintf(stderr,...) and similar. It seems to

dcemri 0.10 has been released on CRAN "dcemri" is (to the best of my knowledge) the first public-domain software package for the quantitative analysis of dynamic contrast-enhanced MRI (DCE-MRI) and diffusion-weighted MRI (DW-MRI or DWI). Data import and export is availble for ANALYZE or NIfTI data formats (sorry, no DICOM). Images are stored in neurological format regardless of the

dcemri 0.10 has been released on CRAN "dcemri" is (to the best of my knowledge) the first public-domain software package for the quantitative analysis of dynamic contrast-enhanced MRI (DCE-MRI) and diffusion-weighted MRI (DW-MRI or DWI). Data import and export is availble for ANALYZE or NIfTI data formats (sorry, no DICOM). Images are stored in neurological format regardless of the

dcemriS4: A package for medical image anlaysis The dcemriS4 package is a major update, and S4 implementation, of the dcemri package.? All previous functionality has been replicated, for DCE-MRI and DWI, with specific emphasis on cancer imaging applications.? Additional major features include: ? o S4 classes for NIfTI and Analyze data formats that merges header and data information o

dcemriS4: A package for medical image anlaysis The dcemriS4 package is a major update, and S4 implementation, of the dcemri package.? All previous functionality has been replicated, for DCE-MRI and DWI, with specific emphasis on cancer imaging applications.? Additional major features include: ? o S4 classes for NIfTI and Analyze data formats that merges header and data information o

CRAN (and crantastic) updates this week New packages ------------ * apcluster (1.0.1) Ulrich Bodenhofer http://crantastic.org/packages/apcluster The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The algorithms are analogous to the Matlab code published by Frey and Dueck. * BioPhysConnectoR (1.6-1) Franziska Hoffgaard

Hello, I hope all is well. I am hoping someone can help me with a problem that I am certain is user error? The configuration details below work in all my other environments including integration, development and qa. However, the production servers give the following error: unable to find server during initialization. When I telnet to the memcached box from the server having the problem and run

Dear all, In R-devel (2011-09-23 r57050), I'm running into a serious problem with seek()ing on connections opened with gzfile(). A warning is generated and the file position does not seek to the requested location. It doesn't seem to occur all the time - I tried to create a small example file to illustrate it, but the problem didn't occur. However, it can be seen with a file I use for

Dear List, Regarding the task views: I was wondering if it would be possible to replace the MedicalImaging task view with an ImageProcessing task view? Alternatively, a separate task view could be created. However, I suspect that there would be considerable overlap. In my opinion, a single task view for image processing, would be preferable. Also, I note that the Spatial task view contains a

please reply to hdgbyi@public.guangzhou.gd.cn or bgpgong@hotmail.com, thank you. UNCERTAINTY PRINCIPLE IS UNTENABLE By reanalysing the experiment of Heisenberg Gamma-Ray Microscope and one of ideal experiment from which uncertainty principle is derived , it is found that actually uncertainty principle can not be obtained from these two ideal experiments . And it is found that