similar to: New package: ncvar

Dear all, I would like to announce the availability of a new package on CRAN: RNetCDF: R Interface to NetCDF Datasets This package provides an interface to Unidata's NetCDF library functions (version 3) and furthermore access to Unidata's udunits calendar conversions. The routines and the documentation follow the NetCDF and udunits C interface, so the corresponding manuals can be

Dear all, I would like to announce the availability of a new package on CRAN: RNetCDF: R Interface to NetCDF Datasets This package provides an interface to Unidata's NetCDF library functions (version 3) and furthermore access to Unidata's udunits calendar conversions. The routines and the documentation follow the NetCDF and udunits C interface, so the corresponding manuals can be

> An orphaned package? anyone in Switzerland know if there's an alternative? Note the email. I guess CRAN-R should be notified. regards, Bob C > The original message was received at Fri, 6 Apr 2007 16:32:57 -0700 > from vayu.arc.nasa.gov [143.232.122.22] > > ----- The following addresses had permanent fatal errors ----- > <juerg.schmidli at env.ethz.ch> >

Dear R users who might like to use the package RNetCDF on Fedora Linux: Fedora (versions 4 and 5) users might have noticed that the default install of the netcdf and netcdf-devel packages from the Fedora Extra archive is inconsistent with the R package RNetCDF. The attempt to install RNetCDF results in a failure in the configure stage because the header & library info for netcdf cannot

Dear Pavel Michna [maintainer of the package] (and copy to R-help Mailing List) When I try to load the package RNetCDF (after install from CRAN) I get this message: > library("RNetCDF", lib.loc="/Library/Frameworks/R.framework/Versions/3.0/Resources/library") Error : .onLoad a ?chou? dans loadNamespace() pour 'RNetCDF', d?tails : appel : NULL erreur : I/O error

Greetings all, I recently tried to install RNetCDF from within R (install.packages) on Fedora Core 8 (with netcdf 3.6.2 and netcdf-devel 3.6.2 already installed). This resulted in an error because the netcdf header files are installed in /usr/include/netcdf-3 rather than /usr/include which is where RNetCDF looks for them. This problem was described in a 2006 post (see below), but no

On a Red Hat Linux cluster I am seeing the following after multiple other packages were successfully installed. The error seems to suggest that RNetCDF.o was not copied to the appropriate lib folder. The admin user performing the install has the required privileges to perform the install. Words of wisdom are greatly appreciated: R CMD INSTALL

I imagine this "where are your header files" problem comes up in other packages, so I'm asking this as a general R question. How should configure scripts be re-written so they look in more places? Briefly, the problem is that Fedora-Extras installs the header files in a subdirectory /usr/include/netcdf-3 rather than /usr/include: # rpm -ql netcdf-devel /usr/include/netcdf-3

Hi Marc That's a workaround I can use. Thanks. I'm a newbie regarding netCDF data. Is there any information I'm losing when switching between the packages? Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 15:13 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch> Betreff: Re: AW: [R] Remove attribute from netcdf4

Dear Marc Thanks for your remark. I don't want to use both packages. I mentioned the package RNetCDF to show that there is a similar function I' d like to use. Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 14:51 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch>; r-help at r-project.org Betreff: Re: [R] Remove

Hello all, I set 'UDUNITS_PATH' and 'NETCDF_PATH' successfully to my custom places and then % R CMD INSTALL RNetCDF_1.1-3.tar.gz and got this: ... checking for executable suffix... checking for object suffix... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for main in -lnetcdf... yes checking for main in -ludunits...

Le 02/08/2017 ? 12:03, raphael.felber at agroscope.admin.ch a ?crit : > Dear all > > For a model I need to combine several netCDF files into one (which works fine). For better overview I'd like to delete/remove some of the attributes. Is there a simple way doing this? > > I'm using the package netcdf4, which creates an object of class(nc) = "ncdf4". It seems that

Hi! I have been coding a C-program which will read data from the netCDF format (a commonly used file format in the geophysical research community: see Unidata's URL for explanation: http://www.unidata.ucar.edu/packages/netcdf/), and have got to the point where I don't know what the error message mean. The C-program is called nc2r.c. When compiling the code, I get a number of warnings,

Dear all For a model I need to combine several netCDF files into one (which works fine). For better overview I'd like to delete/remove some of the attributes. Is there a simple way doing this? I'm using the package netcdf4, which creates an object of class(nc) = "ncdf4". It seems that for earlier versions of netcdf objects, there was the function att.delete.nc{RNetCDF}. But

Hi, I'm new to R. I have some daily soil moisture data for the year 1979 in netcdf format such as these sm19790101.1.nc sm19790102.1.nc . . . sm19791231.1.nc I need to average a variable called "sm" to monthly resolution. I've done these days = formatC(1:31, width=2, flag="0") ncfiles = lapply(days, function(d){ filename = paste("sm197901", d,

Hello - I am having trouble extracting data from NetCDF data files using RNetCDF. The data files each have 3 dimensions (longitude, latitude, and a date) and 3 variables (latitude, longitude, and a climate variable). Here is some of the output from print.nc for clarity: ----- dimensions: month = UNLIMITED ; // (1368 currently) lat = 3105 ; lon = 7025 ; variables: float

Aloha, I just made some quick hacks on the configure script with the 'ncdf' package to make it link with the opendap/dods libraries (opendap.org) rather than the netcdf api library. Basically, this allows a user to interact in R with a remotely served dataset as if it were a netcdf file on the local filesystem (read-only). Functionality with local files should continue to work as

Hi, I'm trying to read a subset of a netcdf file into R, but although I'm relatively experienced using R, I'm still new to netCDF files, so this may be a very simple/stupid question! I've included an example of the type of file I'm looking at here. www.met.reading.ac.uk/~swp06hg/ccd1983_01-dk1_20.nc (~7Mb) It's a 2D array of the variable CCD along with its lat and

*Good day!* I'm using Vista(x64) and R 2.13.0(x64) (with ncdf and RnetCDF packs) *I have a problem:* I'm trying to open **.nc* file and I use this script (http://r.789695.n4.nabble.com/Problem-downloading-and-opening-netcdf-file-td3046897.html#a3046965) library(ncdf) link <- "http://ibis.grdl.noaa.gov/SAT/SeaLevelRise/slr/slr_sla_gbl_free_all_66.nc" dest <-

Hello R Users, Whether 'R' can import Netcdf format data files ?? Any package in 'R' that can help me on this front ?? Many thanks in advance, Regards, Yogesh -- =========================================== Yogesh K. Tiwari, Max-Planck Institute for Biogeochemistry, Postfach 10 01 64, D-07701 Jena, Germany Office : +49 3641 576376 Fax : +49 3641 577300 Home : +49