similar to: Bioinformatician / Statistician position at EMBL Heidelberg

Hello, Might be interesting for some of you: Bioinformatician / Data Analyst Grade: 5 or 6, depending on experience EMBL site: EMBL Heidelberg Commencing date: As sooon as possible, after closing date (28 February 2009) Job description: EMBL is seeking for a Bioinformatician / Data Analyst in its efforts to build an expanded analysis-infrastructure for next-generation sequencing data. The

Hi, I would like to derive p-values for pair-wise comparison (Tukey's) of effects when the response is a count. I am trying a test case where y ~ Po( lambda(x) ). x has three levels : A, B and C with lambda(x) = 10, 20 and 20 respectively. Hence, p-values for the contrast C - B should distribute uniformally. I have implemented this test case as below but do not get uniform

Might be of interest to list subscribers: EMBL Advanced Course R Programming and Development EMBL Heidelberg, Germany Monday 28 November - Tuesday 29 November 2011 The course will focus on two aspects of R programming and development. In the first part, we will introduce object-oriented programming using R's S3 and S4 system and describe how to define classes, generic functions and implement

Dear all, we seek a talented and motivated post-doc to develop computational methods for inferring the molecular basis of genetic diseases by integration of personal omics data. Research topics include: identifying causal mutations of rare disease patients by meta-analysis; inferring disease-causing molecular pathways from genotype, phenotypes, and omics profile of patient-derived cell lines

A core facility bioinformatician position is available at the Institute for Predictive and Personalized Medicine of Cancer (IMPPC) in Badalona, a city immediately north of Barcelona, Spain. We offer a 1 year contract with possibility of extension, with a maximum annual brute salary of 30.000 ?, to be negotiated according to training and experience. The deadline for applications is September 30,

L.S. OpenAnalytics is an international company providing data analysis services and products across geographies and industrial sectors. We are currently looking to expand our bioinformatics team with a candidate who fits the following profile: Bioinformatician: MSc / PhD in Computational Biology, Computer Science or Bioinformatics A detailed description can be found at

Dear All, We (The Cardiff Institute of Infection and Immunity) are very keen to appoint a bioinformatician with a range of opportunities from 'simple' array analysis to aiding in the programming and analysis of novel data platforms. This is an Institutional, not just a project specific, appointment centred on the high quality Internationally-recognised Immunology research done in

Dear all, An opportunity for a Bioinformatician is available at the Biomedical Center (BMC) at Lund University Sweden, in a newly established bioinformatics core. The post holder will join a dynamic and multidisciplinary environment and will play a key role in providing support to diverse projects across different research areas (primarily stem cell research in blood, brain, and diabetes). The

An opportunity for a Bioinformatician is available at the Biomedical Center (BMC) at Lund University Sweden, in a newly established bioinformatics core. The post holder will join a dynamic and multidisciplinary environment and will play a key role in providing support to diverse projects across different research areas (primarily stem cell research in blood, brain, and diabetes). The successful

We are looking for a MSc or PhD holder in Bioinformatics,Molecular/Computational Biology or Computer Science to support ourbiomarker team in the identification, validation and furtherdevelopment of biomarkers. The chosen candidate will be part of ourmultidisciplinary team conducting studies to discover and developdiagnostic biomarkers as well as biomarkers for the characterization ofdisease models

Please do NOT contact me for this post. Please see below for contact details. The company offers solutions for the secure storage and analysis of patient genome sequence information to enable its effective, confidential application to personalized healthcare. The jobholder will be involved in clinical next generation sequence (NGS) data analysis pipeline development. The candidates will be

Full_Name: Julien Gagneur Version: 2.2.1 OS: Linux (Suse 9.3) Submission from: (NULL) (194.94.44.4) Using the SparseM library (SparseM_0.66) and the e1071 library (e1071_1.5-12) I fail using svm method with a sparse matrix. Here is a sample example. I experienced the same problem under Windows. > library(SparseM) [1] "SparseM library loaded" > library("e1071")

A time series text with a title that seems designed to hide its wide scope is: Forecasting with Exponential Smoothing The State Space Approach Hyndman, R.J., Koehler, A.B., Ord, J.K., Snyder, R.D. Springer 2009. This book is actually an excellent overview of time series theory, ARIMA as well as state space. It is of course, in part, a manual for the forecast and other packages in what has been

Hi LLVM-dev! As you know, I'm involved with the PyPy Python compiler effort and have been wroking on the LLVM backend. The LLVM backend will be one of the topics of the upcoming PyPy sprint (see link below), which will take place in Heidelberg, Germany. See sprint announcement below or on http://codespeak.net/pypy/index.cgi?extradoc/sprintinfo/Heidelberg-sprint.html Since we only started

We are currently looking for Data Scientists, Biostatisticians and Bioinformaticians for the Data Analysis Group at the newly founded Data Integration Center at the Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich. The tasks of the Data Analysis Group include the development and implementation of new techniques for data analysis, data quality assessment and

Besides wording of the documentation re truncating vs rounding, there is something peculiar going on with the fractional part of n: > table(sample.int(2.5, 1e6, replace = TRUE)) 1 2 3 399051 401035 199914 > table(sample.int(3, 1e6, replace = TRUE)) 1 2 3 332956 332561 334483 > table(sample.int(2.01, 1e6, replace = TRUE)) 1 2 3

FWIW, I suspect this is related to the function R_unif_index that was introduced in src/main/RNG.c around revision 72356, or the way this function is used in do_sample in src/main/random.c. 20.9.18 08:19, Wolfgang Huber scripsit: > Besides wording of the documentation re truncating vs rounding, there is > something peculiar going on with the fractional part of n: > > >

Dear Neil Have you tried with completely uninstalling your R, and reinstalling a more recent version (e.g. 3.2.4 right now). And then the same with your operating system - OS X is currently at 10.11.4. There is likely not much interest (or benefit) in chasing such things in obsolete versions. And I think R-help would be the more appropriate place for this kind of question. Wolfgang > On Apr

Hi, I am looking for a R package to draw 3d plot. But not in a static way like scatterplot3d or stuff like that. I would like to make rotate the plot, to zoom/unzoom etc..., actually to render the graph 'dynamic'... (for the biologist and bioinformatician, a R package which permitts to reproduce what pdb viewer does). Does a Way exist to do something like that in R ? Thanks,

Dear Wolfgang, Thanks for your response. No, I haven't tried doing the complete reinstallation as you suggest. If I recall correctly, this has happened on previous occasions but like I said in my email it's not all that disruptive to my workflow. It's more like a 'first world problem'. I was encouraged to submit the query because I had correspondence with someone involved