similar to: R Package: 'ggbreak' in Dockerfile

Don't you have to load BiocManager before using it? -----Original Message----- From: R-SIG-Debian <r-sig-debian-bounces at r-project.org> On Behalf Of Gerber, Lauren J Sent: Tuesday, October 15, 2024 9:15 AM To: r-sig-debian at r-project.org Cc: dirk at eddelbuettel.com Subject: Re: [R-sig-Debian] R Package: 'ggbreak' in Dockerfile Hi All, Does anyone have experience

Hi James, I just tried fixing my script and added library(BiocManager) before library(ggbreak), then rebuilt the image, and am still getting the same error. Error in library(ggbreak) : there is no package called 'ggbreak' Execution halted I will say that when I ran docker exec docker_container_id R -e "installed.packages()" I get the following: Package

Lauren, On 15 October 2024 at 13:51, Gerber, Lauren J wrote: | I just tried fixing my script and added library(BiocManager) before library | (ggbreak), then rebuilt the image, and am still getting the same error. You need _two_ distinct commands. First install.packages("BiocManager") and second once that is done use it to install 'ggbreak' from BioConductor

Dear all, My gRbase package imports functionality from the bioconductor packages graph, Rgraphviz and RBGL. To make installation of gRbase easy, I would like to have these bioconductor packages installed in connection with installation of gRbase, but to do so the user must use setRepositories() to make sure that R also installs packages from bioconductor. Having to call setRepositories causes

Hi Gabe, Keeping track of where a package was installed from would be a nice feature. However it wouldn't be as reliable as comparing hashes to decide whether a package needs re-installation or not. H. On 11/8/19 12:37, Gabriel Becker wrote: > Hi Josh, > > There are a few issues I can think of with this. The primary one is that > CRAN(/Bioconductor) is not the only place one

On 08/11/2019 6:17 p.m., Henrik Bengtsson wrote: > I believe introducing a backward compatible force=TRUE is a good > start, even if we're not ready for making force=FALSE the default at > this point. It would help simplify quite-common instructions like > > if (requireNamespace("BiocManager")) > install.packages("BiocManager") >

Hi, Does anyone have GNS3 installation guide? for CentOS 8? Would be grateful if you could give me. Thank you. Sonam ****************************************************************************************************************************** Information contained in this message maybe confidential in nature and is meant for the intended recipient(s) of the message only. Tashi InfoComm

I took the easy route of crippling what I couldn't get working, on the grounds that partial coverage is better than none now that we have Cirrus CI checking commits on additional platforms. This series got me to a green checkmark: https://gitlab.com/ebblake/nbdkit/-/pipelines/793156983 but depends on an as-yet uncommitted patch in libvirt-ci:

Lauren, little oversight from my Dockerfile, if you want to follow the CRAN steps and get the R from the cloud.r-project.org server, you want to replace && add-apt-repository -y "ppa:marutter/rrutter4.0" With && add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/" The ppa repo is Michael Rutter personal repo

> Does anyone have GNS3 installation guide for CentOS 8? This was validated in a KVM - Install dependencies $ sudo dnf -y install platform-python-devel qt5-qtbase python3-qt5 - Download and install dynamips and ubridge ubridge-0.9.14-5.fc30.x86_64.rpm [ https://rpmfind.net/linux/rpm2html/search.php?query=ubridge] dynamips-0.2.21-1.el8.x86_64 [

Am 30.04.20 um 03:16 schrieb Earl Ramirez: > >> Does anyone have GNS3 installation guide for CentOS 8? > This was validated in a KVM > > - Install dependencies > $ sudo dnf -y install platform-python-devel qt5-qtbase python3-qt5 > - Download and install dynamips and ubridge > ubridge-0.9.14-5.fc30.x86_64.rpm [ >

Hi Marco, Thank you for the follow up email. In the line below, do I replace $(lsb-release -cs) with jammy (Ubuntu 22.04) or leave it alone: Add-apt-repository ?deb https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/? It?s good to know about installations for Bioconductor. I am not currently using it, but I may need it in the future for other projects. Br, Lauren -- Lauren J. Gerber

On Mon, Apr 27, 2020 at 6:42 AM Robinson, Paul via llvm-dev < llvm-dev at lists.llvm.org> wrote: > Older releases are still available for download at releases.llvm.org; I > believe the 3.0 release was supposed to be able to read 2.x bitcode, so you > should be able to upgrade the bitcode with 3.0 tools and proceed from > there. I **think** everything since 3.0 is still readable

Re: centos 5 logwatch Has anyone ever looked into why verisign does this from these ips fairly frequently? It appears that it is some type of SSL probing the HTTP port, correct? Are they just gathering stats or something ? --------------------- httpd Begin ------------------------ A total of 2 sites probed the server 216.168.253.197 216.168.253.198 ..... The first ip is

Hi Dirk, Thank you so much for looking into this when you got home. I greatly appreciate it. I was actually in the midst of writing to everyone the following message: ?. ?. ?. Hi All, I have some good news. ? My docker image is now up-to-date with R version 4.4.1. I first had to clear a bunch of unused data using docker system prune ?force. Apparently, it cleared over 32.53 gigs of data, and

Yes, keep the $(lsb-release -cs) there. This allows you to change the version of the OS without having to change anything else (for instance we are migrating all of our docker to 24.04 LTS right now, so we only have to modify the FROM entry and all of our Dockerfile will still work). From: Gerber, Lauren J <lauren.gerber at helsinki.fi> Date: Thursday, July 11, 2024 at 2:21?AM To:

On Fri, Sep 25, 2020 at 5:35 PM Daniel P. Berrangé <berrange@redhat.com> wrote: > On Fri, Sep 25, 2020 at 05:31:09PM +0800, Wei Wang wrote: > > On Fri, Sep 25, 2020 at 5:24 PM Andrea Bolognani <abologna@redhat.com> > > wrote: > > > > > On Fri, 2020-09-25 at 10:16 +0100, Daniel P. Berrangé wrote: > > > > On Fri, Sep 25, 2020 at 05:03:24PM

Hola, Estoy haciendo un PCA con el paquete ade4. En el gráfico, las etiquetas de las especies suelen quedar sobrepuestas unas sobre las otras y no se pueden distinguir individualmente. ¿Hay alguna manera de generar un poco de espacio entre ellas para poder visualizarlas todas? gracias Yésica [[alternative HTML version deleted]]

On 2016-01-29, reynierpm at gmail.com <reynierpm at gmail.com> wrote: > I am building a Dockerfile and I am setting up MariaDB repos as follow: This question is probably way offtopic for a CentOS mailing list. > # Setup MariaDB repos > RUN touch /etc/yum.repos.d/MariaDB.repo > > What's the right way to do this? The one below? > > echo "[mariadb]" >>

I continue to receive an error installing R via dockerfile on a buster image python:3. E: The value 'buster-cran40' is invalid for APT::Default-Release as such a release is not available in the sources My starting point is the debian buster based Python:3 image adding a couple of python specific configurations and then using the commands in the R project documentation for installing R on