similar to: CEBA-2008:0925 CentOS 4 x86_64 openmpi Update

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CentOS Errata and Bugfix Advisory 2008:0925 Upstream details at : https://rhn.redhat.com/errata/RHBA-2008-0925.html The following updated files have been uploaded and are currently syncing to the mirrors: i386: openmpi11-1.1.5-1.el4_7.i386.rpm openmpi-1.2.7-2.el4_7.i386.rpm openmpi-devel-1.2.7-2.el4_7.i386.rpm openmpi-libs-1.2.7-2.el4_7.i386.rpm src: openmpi11-1.1.5-1.el4_7.src.rpm

CentOS Errata and Security Advisory 2008:0893 Moderate Upstream details at : https://rhn.redhat.com/errata/RHSA-2008-0893.html The following updated files have been uploaded and are currently syncing to the mirrors: x86_64: bzip2-1.0.2-14.el4_7.x86_64.rpm bzip2-devel-1.0.2-14.el4_7.i386.rpm bzip2-devel-1.0.2-14.el4_7.x86_64.rpm bzip2-libs-1.0.2-14.el4_7.i386.rpm

CentOS Errata and Security Advisory 2008:0890 https://rhn.redhat.com/errata/RHSA-2008-0890.html The following updated files have been uploaded and are currently syncing to the mirrors: x86_64: wireshark-1.0.3-3.el4_7.x86_64.rpm wireshark-gnome-1.0.3-3.el4_7.x86_64.rpm src: wireshark-1.0.3-3.el4_7.src.rpm -------------- next part -------------- A non-text attachment was scrubbed... Name:

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Sorry to take so long to reply ... On Thu, 2015-12-17 at 11:53 -0500, Tony Schreiner wrote: > Did you load the compat-openmpi environment module? > > module load mpi/compat-openmpi16-x86_64 Yes, but you can't load both mpi/openmpi-x86_64 and?mpi/compat- openmpi16-x86_64 as they are labelled as conflicting. As I said, if you load just mpi/compat-openmpi16-x86_64 it can't find

Did you load the compat-openmpi environment module? module load mpi/compat-openmpi16-x86_64 Tony On Thu, Dec 17, 2015 at 10:57 AM, Pete Biggs <pete at biggs.org.uk> wrote: > > After the 7.2 upgrade boost-openmpi-1.53.0-25 was installed, along > with openmpi-1.10.0-10. The old openmpi was then replaced with compat- > openmpi16-1.6.4-10. All fine. > > Except

After the 7.2 upgrade?boost-openmpi-1.53.0-25 was installed, along with?openmpi-1.10.0-10. ?The old openmpi was then replaced with?compat- openmpi16-1.6.4-10. ?All fine. Except boost-openmpi has a dependency on the old libmpi.so.1 and the new openmpi has libmpi.so.12: # ldd libboost_mpi-mt.so.1.53.0? linux-vdso.so.1 =>??(0x00007ffe8c182000) libboost_serialization-mt.so.1.53.0 =>

Just wondering if anyone can shed some light into an issue we are having with compat-openmpi after upgrading CentOS to version 6.5 Some of our cluster applications are dependent on an older version of OpenMPI, so we are using compat-openmpi. Up to CentOS 6.4 this was version 1.4.3: % /usr/lib64/compat-openmpi/bin/mpirun -V mpirun (Open MPI) 1.4.3 but after the upgrade to CentOS 6.5 it

CentOS Errata and Bugfix Advisory 2013:1187 Upstream details at : https://rhn.redhat.com/errata/RHBA-2013-1187.html The following updated files have been uploaded and are currently syncing to the mirrors: ( sha256sum Filename ) i386: 4d9890eb6188a0e2b4cb664cec93cae75a4df4e2ef1f6360b4f9405e495f0175 boost-1.41.0-18.el6.i686.rpm 9856b6443740b8cbb217adeb51d90da211a5d395284712ec9e04554e2366eff7

I am trying to install the R package "Rmpi" which needs libmpi. I've installed openmpi and lam in Centos 5.2: [root at rab45-1 /]# rpm -qv openmpi openmpi-1.2.5-5.el5 openmpi-1.2.5-5.el5 [root at rab45-1 /]# rpm -qv lam lam-7.1.2-14.el5 lam-7.1.2-14.el5 But I get the following error message when trying to install Rmpi: /usr/bin/ld: skipping incompatible /usr/lib/lam/lib/libmpi.so

CentOS Errata and Security Advisory 2008:0890 https://rhn.redhat.com/errata/RHSA-2008-0890.html The following updated files have been uploaded and are currently syncing to the mirrors: i386: wireshark-1.0.3-3.el4_7.i386.rpm wireshark-gnome-1.0.3-3.el4_7.i386.rpm src: wireshark-1.0.3-3.el4_7.src.rpm -------------- next part -------------- A non-text attachment was scrubbed... Name:

Hi list, It appears there is a problem with the OpenMPI I/O library on CentOS 6.2 & 6.3 (package openmpi-1.5.4-1.el6.x86_64). When I compile the attached program it ends up in the error path since MPI_File_open returns 16. The corresponding (unhelpful) message is: MPI_ERR_OTHER: known error not in list I couldn't find any pointers on the net and the same program works with OpenMPI

Hi all, I'm using RScalapack library for parallelizing some heavy matrix operations required by MCMC methods for spatio-temporal models. The package reference manuals (dated 2005) states that the library needs LamMPI to work but we have a Linux Cluster with OpenMPI. We have found (http://cvs.fedoraproject.org/viewvc/devel/R-RScaLAPACK/) a patch for OpenMPI but we are wondering if in the

I'm running R/snow on a small cluster with opensuse, openmpi, and openshh. I start up R with "mpirun -n 1 R --no-save". That works but it strikes me how easily I get kicked out of R whenever I run into syntax errors. Is there a way to avoid this, for instance, by starting up a regular R session and invoking/activating(?) openmpi within R, e.g. by passing on extra arguments to the

Hello, I'm using R on a 10 blade dual quad core Rocks Cluster, and trying to use Rpmi and snow. I basically wondered if at the moment I ought to install Rmpi against another form of mpi (not openmpi) and wondered whether anyone could pass on any experience. I'm mainly worried about (a) the R server taking up 100% cpu time (I think this is a known issue with Rmpi and openmpi) and (b)

When I install openmpi, openmpi-libs and openmpi-devel (using yum) for CentOS 5, I'm not getting anything set in alternatives for mpi- run and mpicc, etc. Is it supposed to? Cheers, Tony Schreiner Boston College

CentOS Errata and Security Advisory 2008:0893 Moderate Upstream details at : https://rhn.redhat.com/errata/RHSA-2008-0893.html The following updated files have been uploaded and are currently syncing to the mirrors: i386: bzip2-1.0.2-14.el4_7.i386.rpm bzip2-devel-1.0.2-14.el4_7.i386.rpm bzip2-libs-1.0.2-14.el4_7.i386.rpm src: bzip2-1.0.2-14.el4_7.src.rpm -------------- next part

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