similar to: Packages sometimes don't update, but no error or warning is thrown

Hey everyone, Thanks for all the input. It's happening again. This time for the packages "DBI", "parallelly", "segmented", "survival", "V8". So, RStudio shows updates for those and updating them via RStudio leads to this output: ``` > install.packages(c("DBI", "parallelly", "segmented", "survival",

Hello, I see the following issue in R-devel since 'both' has become the default pkgType for binary platforms. update.packages() fails when you set options(repos). Looks like it is trying to download a tgz file from the src/contrib section of a repository (on a mac). To reproduce this you need to have an older version of AnnotationDbi installed, which I accomplished by faking it,

If these are easy changes, maybe someone will incorporate them. You'll make the argument stronger for doing that if you can explain why it's better to do that than to keep them in parallely. Duncan Murdoch On 07/11/2020 1:39 p.m., Henrik Bengtsson wrote: > FWIW, there are indeed a few low hanging bug fixes in 'parallelly' > that should be easy to incorporate into

FWIW, there are indeed a few low hanging bug fixes in 'parallelly' that should be easy to incorporate into 'parallel' without adding extra maintenance. For example, in parallel::makePSOCKcluster(), it is not possible to disable SSH option '-l USER' so that it can be set in ~/.ssh/config. The remote user name will be the user name of your local machine and if you try to

Hi all, Henrik Bengtsson has done some fantastic work with {future} and, more importantly, greatly improved constructing and deconstructing a parallelized environment within R. It was with great joy that I saw Henrik slowly split off some functionality of {future} into {parallelly} package. Reading over the package?s README, he states: > The functions and features added to this package are

On 06/11/2020 4:47 p.m., Balamuta, James Joseph wrote: > Hi all, > > Henrik Bengtsson has done some fantastic work with {future} and, more importantly, greatly improved constructing and deconstructing a parallelized environment within R. It was with great joy that I saw Henrik slowly split off some functionality of {future} into {parallelly} package. Reading over the package?s README, he

Hi all, I am using R-3.0.1 under Linux platform to embed R into my C++ code. I am facing an error while executing more than 1 R-expressions parallelly. I am executing round(X) and abs(X) parallelly on a set of 50 input rows which resulted in segmentation fault after getting the following errors. Error: unprotect_ptr: pointer not found Error: argument to 'findVar' is not an environment

I am looking for ways to add points to three different plots in parallel. I generate three scatter plots and name them as s3d1, s3d2 and s3d3 s3d1<-scatterplot3d(mtcars[,3],mtcars[,4],mtcars[,5],main="common",pch=20) s3d2<-scatterplot3d(mtcars[,3],mtcars[,4],mtcars[,5],main="common",pch=20)

Hello, The help pages for download.packages and install.packages say 'type = getOption("pkgType")'. And on Windows I get getOption("pkgType") [1] "both" which means in ?getOptions pkgType: The default type of packages to be downloaded and installed ? see install.packages. Possible values are "win.binary", "source" and

Message 2 of today: it works now. After re-installing R.app from the same R-2.1.0.dmg file, and fixInNamespace'ing(*) install.packages(), I managed to update 23 outdated packages from CRAN binaries for MacOS X. What I did was to: 1. change call to .install.macbinaries() into call to install.binaries() in install.packages(). install.binaries() is a function defined utils/R/aqua/GUI.R. 2. I

On 7/19/2015 3:50 AM, peter dalgaard wrote: >> For some, but not allI repositories I get the error message below: >> >Error in install.packages(update[instlib == l, "Package"], l, contriburl = >> >contriburl, : >> > specifying 'contriburl' or 'available' requires a single type, not type = >> >"both" >> >

Full_Name: Jari Oksanen Version: R 2.1.0 OS: MacOS 10.3.9 Submission from: (NULL) (130.231.102.145) For various reasons (which need not be expanded here) I have tried to update my long neglected R in MacOS X using handy command line tool update.packages() using readily available binaries of contributed packages at CRAN. However, this fails with message saying that packages xxxx_*_tar.gz is not

Forgot to send one copy to R help. Sorry Megh Dal <megh700004@yahoo.com> wrote: Date: Wed, 7 May 2008 02:45:09 -0700 (PDT) From: Megh Dal <megh700004@yahoo.com> Subject: Re: [R] Solution of function To: Berwin A Turlach <berwin@maths.uwa.edu.au> Hi Berwin, Thanks for having look on my problem. However on ipop() function I see following: ipop solves the quadratic

On 29/07/2015 12:55 PM, Michael Friendly wrote: > On 7/19/2015 3:50 AM, peter dalgaard wrote: > >> For some, but not allI repositories I get the error message below: > >> >Error in install.packages(update[instlib == l, "Package"], l, contriburl = > >> >contriburl, : > >> > specifying 'contriburl' or 'available' requires a

Dear Berwin, Simply stacking the problems and treating the resulting observations as independent will give you the correct coefficients, but incorrect coefficient variances and artificially zero covariances. The approach that I suggested originally -- testing a linear hypothesis using the coefficient estimates and covariances from the multivariate linear model -- seems simple enough. For

Greetings, I am trying to use install.packages obtained from here http://stat.ethz.ch/R-manual/R-devel/library/utils/html/install.packages.html My computer has these OS: 64-bit blfs linux R2.15.1 #------------ A) I did the following:- export DIR=/home/stats/R-2.15.0_runTEST190712A export DEST=/home/stats/Rtester cd $DEST ${DIR}/bin/R install.packages(MASS_7.3-17.tar.gz, ${DEST}, repos =

Hi, I'm trying to install RMySQL and I keep hitting errors. My computer is: uname -a Linux cricket 2.6.18-92.1.22.el5PAE #1 SMP Tue Dec 16 12:36:25 EST 2008 i686 i686 i386 GNU/Linux I have set the following environment settings: export PKG_LIBS="-L/usr/lib/mysql -lmysqlclient" export PKG_CPPFLAGS="-I/usr/include/mysql" I run the following command: R CMD INSTALL

Hello, I am having problems installing RSQLite under FC8. The error message seems to indicate Rversion.h and Rconfig.h are missing. To illustrate the problem, I have copied below the output shown when I first install R (binary distribution) and then try to install RSQLite. Because the problem does not occur when installing RSQLite with R under Windows I suspect the problem is perhaps due to my

Hi I have a problem with Yum update or install and the error message is as below. The same will work if I do U2date install Package name. But yum wouldn't do.! This problem exists with every install or update I do with Yum. Can some one direct me where am I going wrong? Thanks Rajeev [root at Projects03 Download]# yum install perl-DBI-1.40-8.x86_64 Setting up Install Process

Hi all, people who don't follow Linux Today regularly may want to check out: http://linuxtoday.com/developer/2003082000626OSSVDV My apologies if this is considered spam. Cheers, Berwin ========================== Full address ============================ Berwin A Turlach Tel.: +61 (8) 9380 3338 (secr) School of Mathematics and Statistics +61