Displaying 20 results from an estimated 1000 matches similar to: "how to check as CRAN with alternative BLAS?"
2019 Dec 30
0
how to check as CRAN with alternative BLAS?
On 29 December 2019 at 16:39, steven pav wrote:
| One of my packages is slated to be archived from CRAN due to failures when
| the ATLAS BLAS is used. I am unable to replicate the error on my machine
| under R 3.6.1 using the atlas library from ubuntu (seems to be 3.10.2-9,
| while the good professor is using 3.10.3 per
| https://www.stats.ox.ac.uk/pub/bdr/Rblas/README.txt ). I also tried the
|
2017 Dec 05
2
command line arguments are parsed differently on windows, from 3.4.3
One comment:
For your R devel example you didn't use spaces in the expression, i.e.
maybe that's broken too with spaces?
Three questions:
Does it work if you avoid spaces?
Does it work if you use single quotes?
Does this also occur for Rscript?
Thxs
Henrik
On Dec 5, 2017 03:44, "G?bor Cs?rdi" <csardi.gabor at gmail.com> wrote:
I wonder if this is intended.
Thanks,
2017 Dec 05
2
command line arguments are parsed differently on windows, from 3.4.3
Sorry for not reading carefully and thanks for confirming problem with
Rscript too.
On Dec 5, 2017 08:47, "G?bor Cs?rdi" <csardi.gabor at gmail.com> wrote:
> On Tue, Dec 5, 2017 at 4:40 PM, Henrik Bengtsson
> <henrik.bengtsson at gmail.com> wrote:
> > One comment:
> > For your R devel example you didn't use spaces in the expression, i.e.
> maybe
2020 Mar 03
3
survival bug?
My latest submission of survival3.1-10 to CRAN fails? a check, but only on windows, which 
I don't use.
How do I track this down?
The test in question works fine on my Linux box.
Terry
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2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Le 10/01/2023 ? 11:37, Serguei Sokol a ?crit?:
> Le 10/01/2023 ? 10:44, RICHET Yann a ?crit?:
>> Dear R-devel people,
>>
>> We are working to submit a package which is mainly a binding over a 
>> C++ lib (https://github.com/libKriging) using armadillo.
>> It is _not_ a standard RcppArmadillo package, because we also had to 
>> provide a python binding... so
2023 Jan 10
2
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Thank you for your answer.
In facts, 10 threads are asked by armadillo for some LinAlg, which backs to two threads as warned. But I cannot imagine this costs so much time just for that...
A deeper analysis of time spent seems to point that a large time was mainly spent on testthat and Rcpp dependencies compilation... But other recent packages depending on these also are not spending so much time.
2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Dear R-devel people,
We are working to submit a package which is mainly a binding over a C++ lib (https://github.com/libKriging) using armadillo.
It is _not_ a standard RcppArmadillo package, because we also had to provide a python binding... so there is a huge layer of cmake & scripting to make it work with a standard armadillo (but using same version that RcppArmadillo).
It seems now
2023 Jan 10
1
rhub vs. CRAN fedora-*-devel, using armadillo & slapack
Le 10/01/2023 ? 10:44, RICHET Yann a ?crit?:
> Dear R-devel people,
>
> We are working to submit a package which is mainly a binding over a C++ lib (https://github.com/libKriging) using armadillo.
> It is _not_ a standard RcppArmadillo package, because we also had to provide a python binding... so there is a huge layer of cmake & scripting to make it work with a standard armadillo
2011 Feb 10
1
BLAS optimization by CUBLAS
Dear colleagues!
In early 2009 there was a discussion about fast BLAS library initiated by
Sachin. He reported a faster BLAS library made by Nvidia CUBLAS library. Uwe
Ligges showed an interest for placing the optimized rblas.dll into
windows/contrib section managed by him. Unfortunately there is no any CUBLAS
version of rblas.dll in this section at present. So, is anybody interested
in CUBLAS
2024 May 13
0
Change between 86152 and 86534 - probably 86265 - that looks for zspmv in BLAS and not LAPACK causes R with OpenBLAS to fail
Executive summary:
I believe revision 86265 makes it more difficult to build R with
OpenBLAS on Windows as now the entire LAPACK needs to be built to
obtain zspmv. Is there anything that can be done to allow the former
behavior to be used, something in Mkrules.local perhaps?
Detailed Explanation:
I have been building R with OpenBLAS for Windows 64 for over a decade
by patching
2007 Jul 09
1
BLAS / LAPACK version information from within R-session?
Hi,
for diagnostic purposes, I would like to get information about
the BLAS / LAPACK linked against R from within an R-session.
An obvious application could be safety-checks for packages like
Matrix and quantreg at load / attach - time.
Also you could be more precise on the "framework" in which R
is running for comparable benchmark timings on different systems.
Perhaps this
2012 May 09
2
R Installation Manual - ATLAS BLAS guidance that is not in the current version
Good afternoon.
I am trying to compile a version of Rblas.dll based on ATLAS for the Corei7. I had remembered that there was mention of which file to adjust and that "xerbla" needed to be removed from one of the outputs from the last time I tried a few years ago. The most recent version of the R Installation manual does not say anything about this. An older version (2.10 I believe) has
2015 Jun 15
3
Add-on argument in sample()
Hi.
I have a problem with the default behavior of sample(), which performs sample(1:x) when x is a single value.
This behavior is well explained in ?sample.
However, this behavior is annoying when the number of value is not predictable. Would it be possible to add an argument
that desactivates this and perform the sampling on a single value ? Examples:
> sample(10, size = 1, replace = FALSE)
2009 Feb 20
1
Faster Blas Library
Hi everyone,
I have made a faster BLAS library thanks to Nvidia CUBLAS library. I was
wondering how I could upload this new Rblas.dll. I've included a powerpoint
presentation I made on the project.
Highlights include upto 2000% improvement in matrix multiplication timings.
Unfortunately the link included in the presentation is only accessible by
CSIRO employees only. I will gladly include
2015 Jun 15
2
Add on argument in seq()
Hi.
I have a problem with the default behavior of seq(), which gives the argument "from" when the argument length.out = 1.
This behavior is annoying when the number of value determine in length.out is not predictable.
Would it be possible to add an argument that propose the median/mean, i.e. (from + to) / 2 when  length.out = 1 ? Examples:
> seq(from = 1, to =  11, length.out=1) #
2007 Oct 15
5
Very simple code throwing "uninitialized constant" error
This code works on an older version of Ruby and Rails but not with
Ruby 1.8.6 and Rails 1.2.5. The code is so simple that I can''t figure
out where the problem is.
profile_controller.rb
class ProfileController < ApplicationController
	def show
		@profile = Profile.find_by_school_id(params[:id])
	end
end
-----------------------------------------------------------
profile.rb
class
2017 Jan 27
2
cross-platform portable code in CRAN Repository Policy
On 27 January 2017 at 21:54, G?bor Cs?rdi wrote:
| On Fri, Jan 27, 2017 at 9:28 PM, Da Zheng <zhengda1936 at gmail.com> wrote:
| > What major R platforms does this policy refer to?
| >
| 
| Linux, macOS, Windows.
| 
| 
| > Currently, my package runs in Ubuntu. If it works on both Ubuntu and
| > Redhat, does it count as two platforms?
| >
| 
| I think that Linux is just one. Is
2020 May 26
2
Changing the BLAS from openblas on a F32 box
Dear list,
What is the recommended incantation on Fedora 32 to swap out the
openblas BLAS that the packaged (rpm) version of R-core installs for
ATLAS?
I'm running into some problems with some big models I want to fit
using the mgcv package, and openblas is apparently not thread safe and
is causing problems.
I have the following installed:
$ dnf list installed | grep ^R
R-core.x86_64      
2015 Jun 15
2
Add on argument in seq()
Thanks for your answer.
The rational behind my proposal is why taking "from" when length.out=1, more than "to" or "NA", or " integer(0) " ?
This question seems basic. But is is not in certain situations, like when length.out =  unpredictable positive integer.
And I haven't found in ?seq() the particular behavior of this function when length.out = 1.
2019 Dec 27
0
Providing R binaries compiled against a multithreaded BLAS like Intel MKL by default?
Dear all,
Given that the Intel MKL multithreaded BLAS is now free (https://software.intel.com/en-us/mkl/choose-download, released under the very permissive Intel Simplified Software License,
https://software.intel.com/en-us/license/intel-simplified-software-license) and that this BLAS comes out as the fastest in most benchmarks, and that Microsoft R Open compiled against Intel MKL seems to be