similar to: Better cleanup of example session during check

On 12/11/2018 8:09 AM, Thomas Lin Pedersen wrote: > I have a couple of packages (?fiery? and ?reqres') that uses a mock of a rook request for their examples. The mock is an R6 object containing a rawConnection, along with a finalizer that closes this connection when the object is removed. So far so good. I?ve recently been getting CRAN errors due to the rawConnection not being closed in

Dear ?useRs, Rook version 1.0-3 has been submitted to CRAN. In the mean time you can get it here: https://github.com/jeffreyhorner/rRack/blob/master/Rook_1.0-3.tar.gz The latest release contains support for deployment with rApache. Please see 3.6.5 and 3.6.6 under section 'Configuring rApache' in the manual: http://www.rapache.net/manual.html#Configuring_rapache What is Rook? A

Dear ?useRs, Rook version 1.0-3 has been submitted to CRAN. In the mean time you can get it here: https://github.com/jeffreyhorner/rRack/blob/master/Rook_1.0-3.tar.gz The latest release contains support for deployment with rApache. Please see 3.6.5 and 3.6.6 under section 'Configuring rApache' in the manual: http://www.rapache.net/manual.html#Configuring_rapache What is Rook? A

Good morning, we recently observed a problem with importing S3 generics from a foreign package (without namespace), defining a S3 method in a package _with_ namespace and the `cleanEx()' function which is automatically generated and executed before examples are run by R CMD check. To be more precise. Package `strucchange' defines a S3 generic sctest <- function(x, ...)

I am developping a package (pgirmess) that since long does not go through CRAN MacOSX checks, just because I have this command in one of the examples. text(mydata[,3],mydata[,4],paste(round(dirs,0),"?"),cex=0.7) It makes: <ERROR: re-encoding failure from encoding 'latin1'> text(mydata[,3],mydata[,4],paste(round(dirs,0),"+ + + + cleanEx() +

Add the following to example section of a dot-Rd manpage: ## :WHY: The following kills R CMD check but runs fine on console. foos <- c("aaa", "bbb", "ccc") cat(sapply(foos, function(foo) { sprintf("name: %-18s upper: %s\n", foo, toupper(foo)) }), sep="") R CMD

All, At first glance, a recent commit to R-devel ( https://github.com/wch/r-source/commit/2c182014ecc8c2407a89092c9162d86046bd18da) appears to be related to long vector support. But as Henrik Bengtsson points out at https://github.com/HenrikBengtsson/Wishlist-for-R/issues/97#issuecomment-562659134, writeBin() still prohibits long vectors. Are there any plans to add long vector support to R

L.S. Situation: I am running Samba 2.2.7a as my DPC in a small business network with win98/ME clients. A big Fiery printer/scanner/copier device is also part of this network. It has its own printserver. Since Win98/ME can not print to an LPD queue directly, I have setup Samba to spool the printjobs send by the clients to the Fiery server. All is working well, but there is a small problem. This

Dear listers, I was used to package pgirmess under Windows with everything OK, but, for the first time, I had a trial this afternoon on Ubuntu 7.10 gutsy (I have a double boot computer and work more and more under unix) and R 2.7.0. Everything went OK except this: sudo R CMD check pgirmess ..... * checking examples ... ERROR Running examples in 'pgirmess-Ex.R' failed. The error most

Hi all, Today, i just installed the newest R version 2.10.1 and other necessary tools for building R package under windows,e.g. Rtools, perl. All are the newest version. After the correct configuration under windows (configuration should be correct), i use it to re-check my old package. I found the following prolem when checking EXAMPLEs in each function, which did not exist before this

This question involves Rook, but I think the answer will be general enough that it pays to post here. At any rate, I don't know enough to know whether this is a Rook only issue or a general R issue. Here's what I'd like to do (and indeed, have code that should do this): 1. Start R, Rook 2. Start an analysis via a HTTP request to Rook. This analysis uses .Call() to some compiled C

I have a r-script (rook.R) that starts a Rook server. To present users from having to start R and type in source("rook.R"), I want to create a bash script and bat file that starts R and sources the script. However, to keep the Rook server running R should not close after running the script and stay in interactive mode. This proves more difficult than expected. I tried various

Full_Name: Madeleine Yeh Version: 1.9.1 OS: AIX 5.2 Submission from: (NULL) (151.121.225.1) After compiling R-1.9.1 on AIX 5.2 using the IBM cc compiler, I ran the checks. One of them failed. Here is the output from running the check solo. root@svweb:/fsapps/test/build/R/1.9.1/R-1.9.1/tests/Examples: ># ../../bin/R --vanilla < stats-Ex.R R : Copyright 2004, The R

Hi, When people try and break into my system from the internet I get lots of messages like: Nov 14 19:08:13 rook sshd[6333]: Failed password for invalid user guest from 210.83.48.238 port 40811 ssh2 Nov 14 19:08:19 rook sshd[6338]: Invalid user admin from 210.83.48.238 Nov 14 19:08:19 rook sshd[6338]: Failed password for invalid user admin from 210.83.48.238 port 40920 ssh2 Nov 14 19:08:24 rook

Hi everyone, I'm trying to diagnose a problem in my R package, but it is a little tricky since it seems to occur only with the Mac OSX CRAN binary build. My package starts a Rook server and opens a browser. On my own system (details below), when I build the package, I have no trouble. The Rook server starts and the page loads in the browser. However, if I've installed it from CRAN, I

Hi all, I've got a package i've written that i am trying to check, build, and install. This is my 1st time doing this, so apologies in advance... ;) The package that I've written requires input from the user. It needs to know sample sizes and then runs some calcs, (sample sizes are just integers), and it gets this info from the user as num_reps <- readline("How many reps

This SO post: https://stackoverflow.com/q/76583828 describes a strange R CMD check error. Depending on the contents of a comment in one of the examples sections of a help page, an error like this could be triggered: > base::assign(".dptime", (proc.time() - get(".ptime", pos = "CheckExEnv")), pos = "CheckExEnv") >

Dear R-users, Is there a procedure to identify neighbors in a regular lattice using either a "rook" or a "queen" criterium? To be more specific, suppose: My lattice: 1 2 3 4 5 6 7 8 9 "Rook" Neighbors 1 has neighbors 2,4 2 has neighbors 1,3,5 ... 5 has neighbors 2,4,6,8 "Queen Neighbors" 1 has neighbors 2,4,5 2 has neighbors 1,3,4,5,6 For each case,

Dear list, When I run an R CMD check --as-cran on my package (pROC) I get the following note: > Uses the superseded package: ?doSNOW? The fact that it uses the doSNOW package is correct as I have the following example in an .Rd file: > #ifdef windows > if (require(doSNOW)) { > registerDoSNOW(cl <- makeCluster(2, type = "SOCK")) > ci(roc2,

AFAIK there is no hashing utility in base R which can create hash digests of arbitrary R objects. However, as also described by Henrik Bengtsson in [1], we have tools::md5sum() which calculates MD5 hashes of files. Calculating hashes of in-memory objects is a very common task in several areas, as demonstrated by the popularity of the 'digest' package (~850.000 downloads/month). Upon