similar to: NEWS vs. inst/NEWS

This bug appears in the current Windows build; I don't know if it applies generally. Duncan Murdoch On Fri, 26 Sep 2003 15:25:57 +1200 (NZST), Ray Brownrigg <ray@mcs.vuw.ac.nz> wrote: >If you INSTALL (Rcmd INSTALL) or cross-compile >(make PKGDIR=/pkg RLIB=/library pkg-mypkg) the copying of the inst >directory seems to happen very early in the process, *before anything is

This bug appears in the current Windows build; I don't know if it applies generally. Duncan Murdoch On Fri, 26 Sep 2003 15:25:57 +1200 (NZST), Ray Brownrigg <ray@mcs.vuw.ac.nz> wrote: >If you INSTALL (Rcmd INSTALL) or cross-compile >(make PKGDIR=/pkg RLIB=/library pkg-mypkg) the copying of the inst >directory seems to happen very early in the process, *before anything is

When a package is built it is first moved to a temporary directory (lines 962-980 in build.R). However, this moves *all* files to the temporary directory, even those in Rbuildignore; only later (lines 997-1024) are Rbuildignore files excluded. The problem with this approach is that some files in the package directory may not be movable. On Windows at least, the full path name to a file must not

Package: mcgibbsit Title: Warnes and Raftery's MCGibbsit MCMC diagnostic Version: 1.0 Author: Gregory R. Warnes <gregory_r_warnes at groton.pfizer.com> Description: mcgibbsit provides an implementation of Warnes & Raftery's MCGibbsit run-length diagnostic for a set of (not-necessarily independent) MCMC sampers. It combines the estimate error-bounding approach of Raftery

Package: mcgibbsit Title: Warnes and Raftery's MCGibbsit MCMC diagnostic Version: 1.0 Author: Gregory R. Warnes <gregory_r_warnes at groton.pfizer.com> Description: mcgibbsit provides an implementation of Warnes & Raftery's MCGibbsit run-length diagnostic for a set of (not-necessarily independent) MCMC sampers. It combines the estimate error-bounding approach of Raftery

NIMBLE version 0.6-2 has been released on CRAN and at r-nimble.org. NIMBLE is a system that allows you to: - Write general hierarchical statistical models in BUGS code and create a corresponding model object to use in R. - Build Markov chain Monte Carlo (MCMC), particle filters, Monte Carlo Expectation Maximization (MCEM), or write generic algorithms that can be applied to any model. -

NIMBLE version 0.6-2 has been released on CRAN and at r-nimble.org. NIMBLE is a system that allows you to: - Write general hierarchical statistical models in BUGS code and create a corresponding model object to use in R. - Build Markov chain Monte Carlo (MCMC), particle filters, Monte Carlo Expectation Maximization (MCEM), or write generic algorithms that can be applied to any model. -

Thank you Gabriel, Just for future readers. Below is a base R way to address this common problem, as instructed by you (+stopifnot to suppress print). Rscript -e 'stopifnot(file.copy("DESCRIPTION", file.path(tdir<-tempdir(), "PACKAGES"))); db<-available.packages(paste0("file://", tdir));

dir(all=TRUE) returns the file names "." and ".." while dir(recursive=TRUE, all=TRUE, include.dirs=TRUE) does not. I always filter out the "." and ".." entries and was wondering if anyone would mind if dir(all=TRUE) just omitted them? It might make recursive file operations like cleaning out a directory safer, as unlink(recursive=TRUE, dir(all=TRUE,

Hi, on my R-3.0.2 windows (32bits) no error is thrown occurs when calling a shell command with intern=TRUE, mustWork=TRUE. Is this a intended/known behaviour? >From the source of base::shell it is clear that mustWork is only used when intern=FALSE. This is not that clear from the help page: " Arguments mustWork a logical; if TRUE failure to run the command will give an R error, if FALSE

I am trying to read and write database tables that have a date field in them. I am constructing a data.frame, then using dbWriteTable to create the table and dbReadTable to read it. >datatbl<-data.frame( dates, trialnum, fooddel, ethdel, trialtime, trialtype, deliveries, food, ethanol, fcumrec, dcumrec, rrf, rrd) >ifelse(startdate==filelist,

While constructing some tests of symbolic link code in R, I got an odd warning when trying the remove a symbolic link: file.create(tfile <- tempfile()) #[1] TRUE file.symlink(tfile, tlink <- tempfile()) #[1] TRUE unlink(tlink) #Warning message: #In unlink(tlink) : # cannot delete reparse point 'C:\Users\wdunlap\AppData\Local\Temp\Rtmp0oB1gl\fileedc792515a3', reason 'There is a

Hello, just installed build 50, and typed ''zfs'' in a shell. I got the help message, and was surprised with it : -------------------- bash-3.00# zfs commande manquante syntaxe : zfs command args ... o? ''command'' est l''une des possibilit?s suivantes : create [[-o property=value] ... ] <filesystem> create [-s] [-b blocksize] [[-o

Mageia introduced dnf as alternative package manager for the next version 6, with the possibility to replace urpmi as primary in the future. As such, prefer dnf over urpmi+fakeroot to download rpm packages. Thanks to Neal Gompa for his heads-up. --- README | 3 +-- src/rpm.ml | 8 +++++--- 2 files changed, 6 insertions(+), 5 deletions(-) diff --git a/README b/README index 79fcfd8..679bf70

Dear R Core: In the kutils package, I wrote a function that is so handy that I would like to ask you put it in R itself. file.backup() will look at a file, find its last modification time, and create a new backup with a name that appends YYYYMMDD-HHMM to the file name. So now, whenever I worry that running write.csv or saving a graph might destroy something valuable, I use an idiom like fn

Hello rsync list, I am running a Solaris 8 system and have rsync 1.6.2 protocal 14 installed. We have updated (wed 17-dec) to the latest Solaris 8 recommended patch set. When performing an rsync of two local UFS partitions rsync "hung", never completed, didn't exit. What I forced an exit via kill signal core dumped. Config of disks is that 1) Mirror by Solistice Disksuite rsync to

Just code motion, no functional change. --- src/rpm.ml | 25 ++++++++++--------------- 1 file changed, 10 insertions(+), 15 deletions(-) diff --git a/src/rpm.ml b/src/rpm.ml index ce803e1..771022e 100644 --- a/src/rpm.ml +++ b/src/rpm.ml @@ -288,11 +288,7 @@ let rec fedora_download_all_packages pkgs dir = * Use name.arch so it can download any version but only the specific *

Hello all, Currently, the default behavior for system.file() is to return "" for faulty paths. I've found this behavior to be difficult when debugging, since it passes the empty path onto other functions. I initially wrote in errors myself (with code like `if(path == "") stop(?Path not found?)`), but I now use mustWork=TRUE or fs::path_package(), which errors by default.

Dear R and Bioconductor Helpers, I am using a package called RankProd under Bioconductor to analysis my Y98 (yeast) microarray data. I had no problem following the example in the vignette but got stocked when I tried to analyze my own data. When I tried to run the following command, RP.out <- RP(rrf.sub, rrf.cl.sub, gene.names = y98.gnames, rand = 123) I got the following response: Rank

Hello together, this is ma first post, so please aplogize me if post this in the wrong section. I have problem concerning ma two matrizes. After a regressione and so on, I got two matrizes Matrixres contains the results of ma calculation. Matrixr contains my detiene, which where Aldo used for the regression. Please ser the following code: #Datei einlesen residual =