similar to: R libcurl does not recognize server certs

im hosting a local cran repo on an NGINX server and it fails to pull the index at /src/contrib/ the layout of the index is different from apache, could this be disrupting R? John Roman Linux System Administrator RAND Corporation joroman at rand.org X7302 __________________________________________________________________________ This email message is for the sole use of the intended

Dirk, Thank you for your elaboration. This issue is related to curl trusting a CA cert as its called by R. curl called from bash recognizes the system cert bundle for CA's, curl called from R does not. may I know how to trust the system certificate bundle from within R? John Roman Linux System Administrator RAND Corporation joroman at rand.org X7302

Thanks for the advice. Going to look into this more this evening and hopefully get everything working. Thanks again! On Thu, Nov 5, 2015 at 11:56 AM, Dirk Eddelbuettel <edd at debian.org> wrote: > > On 5 November 2015 at 11:44, Michael Coyne wrote: > | What do you have installed as far as libcurl goes? Would you mind > | listing your packages and greping for libcurl entries.

Dear Dirk, Do you mean binaries for R-3.3.3? I could not find any link on the page you mention I downloaded R-3.3.3.tar.gz from https://cran.r-project.org/src/base/R-3/ then ran ./configure I also tried ./configure --enable-R-shlib based on a suggestion found in http://jenzopr.github.io/bioinformatics/2016/05/03/r-wheezy-build.html Many thanks, Lucio On 4 April 2017 at 17:17, Dirk

What do you have installed as far as libcurl goes? Would you mind listing your packages and greping for libcurl entries. Perhaps I need some libcurl debs installed when I install r-base? On Thu, Nov 5, 2015 at 11:34 AM, Dirk Eddelbuettel <edd at debian.org> wrote: > > On 5 November 2015 at 11:11, Michael Coyne wrote: > | Hello, > | > | I'm install R from a package off of

For precise, from which you should really upgrade, you need to look at the very `help(options)` I pointed you to and select _the external curl or wget_ as the method for `download.file()`. Dirk -- http://dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org

On Sat, Apr 28, 2018 at 2:38 PM, Dirk Eddelbuettel <edd at debian.org> wrote: > That said, thanks for the heads up. We'll see what comes out of it. My Debian > package also still uses curl3, but I noticed that there is a whole formal > transition going on -- so 'our' r-base-core package would get rebuilt anyway If I understand it correctly this is a problem only in

Dear all, I am trying to upgrade R on Debian 3.16.0-4-amd64, as the default R version is 3.1.1 (2014). When I try to run ./configure on R-3.3.3, I get an error message saying ... checking for curl-config... /usr/local/bin/curl-config checking libcurl version ... 7.53.1 checking curl/curl.h usability... yes checking curl/curl.h presence... yes checking for curl/curl.h... yes checking if libcurl

Dirk, I appreciate that you were trying to help, but I would suggest you don't answer a question if you find it irritating or think it is posed by someone who hasn't taken the time to figure things out on his own... others might be able to spare a bit more time and be more patient, however basic the question is. There is a lot of material covered in the page and I found your "read

One of the curl maintainers has pointed me to this bug report on Launchpad that may affect r-base users: https://bugs.launchpad.net/ubuntu/+source/curl/+bug/1754294 The issue is that ubuntu now ships both libcurl3 (gnutls, nss) as well as libcurl4 (openssl) which cannot be installed concurrently. Because r-base-core depends on libcurl4, it will conflict with any other packages depending on

Hello everybody, by the way, speaking about the r-cran-rcurl package in Ubuntu, the versions in trusty and vivid are linked by error to the "NSS" flavour of libcurl3 instead of the "OpenSSL flavour", which cause at least problems when using the CRAN devtools package. A bit more details are available in the Debian bug tracking system (https://bugs.debian.org/786473). I am not

The one strange thing I am now noticing is that precise does not have libcurl listed as a dependency. If you go to https://cran.r-project.org/bin/linux/ubuntu/precise/Packages and look for "libcurl" it is not listed. The other Ubuntu builds, such as trusty or wily do list it. On Thu, Nov 5, 2015 at 12:01 PM, Michael Coyne <mikeycgto at gmail.com> wrote: > Thanks for the advice.

On 5 November 2015 at 11:44, Michael Coyne wrote: | What do you have installed as far as libcurl goes? Would you mind | listing your packages and greping for libcurl entries. The distribution works with proper dependencies. When R is built with libcurl, the R package already depends on libcurl: edd at max:~$ dpkg -s r-base-core | grep curl Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3

On 28 April 2018 at 12:16, Jeroen Ooms wrote: | One of the curl maintainers has pointed me to this bug report on | Launchpad that may affect r-base users: | https://bugs.launchpad.net/ubuntu/+source/curl/+bug/1754294 | | The issue is that ubuntu now ships both libcurl3 (gnutls, nss) as well | as libcurl4 (openssl) which cannot be installed concurrently. Because | r-base-core depends on libcurl4,

Hello, I'm install R from a package off of https://cran.r-project.org/bin/linux/ubuntu/. The install works fine but it does not support libcurl as indicated by executing "capabilities('libcurl')". As such, I cannot install packages from HTTPS sources. How can I install R from a package with libcurl support? Is this possible or do I need to manually build R from source and

I needed to compile nbdkit on CentOS 7 which is missing these protocols in curl, so hence the conditional compilation. Signed-off-by: Martin Kletzander <mkletzan@redhat.com> --- I have this patch so that I can compile it on CentOS 7 (fully updated), but I'm not sure what is the support policy and I didn't even check whether the libcurl there is old or whether the SMB support is

Hi there, I got a question regarding compiling the icecast2-server: When I'm executing the 'sh autogen.sh' command and is checking for libraries, it says that it didn't find the 'libcurl' library, although I have the curl-rpm installed that includes the libcurl (located in /usr/lib). I compiled icecast2 anyway and tried running it. If I try to get the status.xsl

On 7/15/20 1:35 PM, Dirk Eddelbuettel wrote: > On 15 July 2020 at 16:16, Sam H wrote: > | I am trying to download some data using read.csv and it works perfectly in > | RStudio and fails in the R console in the terminal in Ubuntu 18.04 after > | upgrading from R 3.6.3 to 4.0.2. Before upgrading this worked in the R > | console in the terminal also without any issues. > | > |

On 2018-07-07 06:27, Dirk Eddelbuettel wrote: > > On 7 July 2018 at 00:51, G?ran Brostr?m wrote: > | My repo is > | > | deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran35/ > | > | Is that wrong? > > That repo will give you R and key R packages like Matrix lme4. (And you > chose to ignore this repo by compiling R yourself ...). Not really: I installed

R-devel r69197 returns appropriate errors for the cases below; I know of a few rough edges - ftp error codes are not reported correctly - download.file creates destfile before discovering that http fails, leaving an empty file on disk and am happy to hear of more. Martin On 08/27/2015 08:46 AM, Jeroen Ooms wrote: > On Thu, Aug 27, 2015 at 5:16 PM, Martin Maechler > <maechler at