Displaying 20 results from an estimated 700 matches similar to: "Error in socketConnection(master, port = port, blocking = TRUE, open = "a+b", : cannot open the connection"
2013 Oct 03
1
Problem with makePSOCKcluster R3.0.1
Hello,
I am using function makePSOCKcluster to make parallel computation on 3 EC2
Amazon machines.
I have a passwordless between machines and ssh is correct.
In the R 2.15.1 release this function works correctly.
Installing R 3.0.1 on my EC2 machines makePSOCKcluster does not produce the
cluster.
If I run the function with outfile="" option, I obtain this message
Error in
2018 Mar 09
2
parallel:::newPSOCKnode(): background worker fails immediately if socket on master is not set up in time (BUG?)
BACKGROUND:
While troubleshooting random, occasionally occurring, errors from
parallel::makePSOCKcluster("localhost", port = 11000);
Error in socketConnection("localhost", port = port, server = TRUE,
blocking = TRUE, :
cannot open the connection
I had another look at parallel:::newPSOCKnode(), which is used
internally to set up each background worker. It is designed to,
2018 Mar 09
2
parallel:::newPSOCKnode(): background worker fails immediately if socket on master is not set up in time (BUG?)
A solution is to have parallel:::.slaveRSOCK() attempt to connect
multiple times before failing, e.g.
makeSOCKmaster <- function(master, port, timeout, useXDR, maxTries
= 10L, interval = 1.0) {
port <- as.integer(port)
for (i in seq_len(maxTries)) {
con <- tryCatch({
socketConnection(master, port = port, blocking = TRUE,
2018 Mar 10
1
parallel:::newPSOCKnode(): background worker fails immediately if socket on master is not set up in time (BUG?)
Great.
For the record of this thread, I've submitted patch PR17391
(https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17391). I've
patched it against the latest R-devel on the SVN, passes 'make
check-all', and I've verified it works with the above tests.
/Henrik
On Fri, Mar 9, 2018 at 4:37 AM, <luke-tierney at uiowa.edu> wrote:
> I'm happy to look at a
SUGGESTION: Proposal to mitigate problem with stray processes left behind by parallel::makeCluster()
2019 Mar 18
2
SUGGESTION: Proposal to mitigate problem with stray processes left behind by parallel::makeCluster()
(Bcc: CRAN)
This is a proposal helping CRAN and alike as well as individual
developers to avoid stray R processes being left behind that might be
produced when an example or a package test fails to set up a
parallel::makeCluster().
ISSUE
If a package test sets up a PSOCK cluster and then the master process
dies for one reason or the other, the PSOCK worker processes will
remain running for 30
2013 Oct 09
2
Error while running MR using rmr2
Hi,
I have trying to run a simple MR program using rmr2 in a single node Hadoop
cluster. Here is the environment for the setup
Ubuntu 12.04 (32 bit)
R (Ubuntu comes with 2.14.1, so updated to 3.0.2)
Installed the latest rmr2 and rhdfs from
here<https://github.com/RevolutionAnalytics/RHadoop/wiki/Downloads>and
the corresponding dependencies
Hadoop 1.2.1
Now I am trying to run a simple MR
2018 Feb 23
1
Bug in installing rgdal
*@*
*BLAS: /usr/lib/libblas/libblas.so.3.6.0LAPACK:
/usr/lib/lapack/liblapack.so.3.6.0locale: [1] LC_CTYPE=en_IN.UTF-8
LC_NUMERIC=C LC_TIME=en_IN.UTF-8 [4]
LC_COLLATE=en_IN.UTF-8 LC_MONETARY=en_IN.UTF-8
LC_MESSAGES=en_IN.UTF-8 [7] LC_PAPER=en_IN.UTF-8
LC_NAME=C LC_ADDRESS=C [10]
LC_TELEPHONE=C LC_MEASUREMENT=en_IN.UTF-8
2023 Jun 08
1
Cryptic error from stargazer
Dear All,
Here is my reproducible example:
> library(stargazer)
Please cite as:
Hlavac, Marek (2018). stargazer: Well-Formatted Regression and
Summary Statistics Tables.
R package version 5.2.2. https://CRAN.R-project.org/package=stargazer
> x1=1:1000 ; y = 2 * x1+ rnorm(1000)
> stargazer(lm(y~x1))
Error in (.format.s.statistics.list != "p25") &&
2023 Jun 08
1
Cryptic error from stargazer
Dear All,
I had done an automatic upgrade of my Debian 10 system which had also
upgraded R.
I reinstalled the stargazer package and the error went away.
Query : Do I need to reinstall all packages with each upgrade of R ?
Best,
Ashim
On Thu, Jun 8, 2023 at 11:11?AM Ashim Kapoor <ashimkapoor at gmail.com> wrote:
>
> Dear All,
>
> Here is my reproducible example:
>
>
2018 Mar 09
0
parallel:::newPSOCKnode(): background worker fails immediately if socket on master is not set up in time (BUG?)
I just noticed that parallel:::.slaveRSOCK() passes 'timeout' to
socketConnection() as a character, i.e. there's a missing timeout <-
as.integer(timeout), cf. port <- as.integer(port) and useXDR <-
as.logical(value):
> parallel:::.slaveRSOCK
function ()
{
makeSOCKmaster <- function(master, port, timeout, useXDR) {
port <- as.integer(port)
con
2009 Jun 10
1
Unable to load package:lme4 [ Ubuntu 9.04 ]
Hi folks,
When I try to load package 'lme4' on my Linux box (64-bit Ubuntu
9.04), I get the following error:
-------------------------------------
> library(lme4)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
function 'cholmod_start' not provided by package 'Matrix'
Error: package/namespace load failed for 'lme4'
------------------------------------
I
2023 Jun 08
1
Cryptic error from stargazer
On Thu, 08 Jun 2023, Ashim Kapoor writes:
> Dear All,
>
> I had done an automatic upgrade of my Debian 10 system which had also
> upgraded R.
>
> I reinstalled the stargazer package and the error went away.
>
> Query : Do I need to reinstall all packages with each upgrade of R ?
>
> Best,
> Ashim
Your session info says "stargazer 5.2.2". What version
2010 Sep 28
2
Use R in Visual Basic Environment
I need your kind help regarding the following:
I wish to know is there any way to use R in Visual Basic environment. I want
to develop a VB application where R can be embedded (R will work as a back
end statistical engine). If available, please provide me some source of
study materials/articles available on the internet related to this.
--
Thanks & Regards,
Soumen Pal
[[alternative HTML
2006 Jun 06
2
Language 'en_IN' was not recognized, defaulting to 'en_US'.
hey friends,
I am using wine 0.9.12 on centos 4.0 kernel version is
2.6.9-34.0.1.EL. Whenever I try to run any application through wine I
get the below warning and the application does not run. Langauge
settings before were Indian English but later on I changed it to
US_English but still I am getting the below error.
Warning: Language 'en_IN' was not recognized, defaulting to
2018 Mar 09
0
parallel:::newPSOCKnode(): background worker fails immediately if socket on master is not set up in time (BUG?)
I'm happy to look at a patch that does this. I'd start with a small
interval and increase it by 50%, say, on each try wit a max retry time
limit. This isn't eliminating the problem,only reducing the
probability, but still worth it. I had considered doing something like
this but it didn't seem necessary at the time. You don't want to retry
indefinitely since the connection
2010 Sep 04
2
Query regarding Windows based statistical software development using R as programming language
Hi,
I am a beginner in R. I have a query as below:
Is it possible to develop a Windows based statistical software
(user-friendly) like SPSS using R as a programming language?
Otherwise, is it possible to use R code directly (no command-line
execution) in Windows based programming language such as Visual Basic?
Please help me, if possible, with some link to study materials related to
such topic.
2003 Feb 07
1
Bug in socketConnection (PR#2535)
Platform: Windows
Version: 1.6.2
When first called, socketConnection gives an error. On subsequent calls it
performs correctly. Thus the first call has the effect of "priming" the
connection. Eg
> socketConnection(port=50)
Error in socketConnection(port = 50) : unable to open connection In
addition: Warning message:
localhost:50 cannot be opened
> MIM <-
2012 Nov 09
0
(no subject)
Hi all,
The TWS on my system is unable to connect to my R session. Here is the
error that I'm getting:
*> tws<-twsConnect()
Error in socketConnection(host = host, port = port, open = "ab", blocking =
blocking) :
cannot open the connection
In addition: Warning message:
In socketConnection(host = host, port = port, open = "ab", blocking =
blocking) :
localhost:7496
2012 Nov 16
0
TWS and R
Hi all,
The TWS on my system is unable to connect to my R session. Here is the
error that I'm getting:
/> tws<-twsConnect()
Error in socketConnection(host = host, port = port, open = "ab", blocking =
blocking) :
cannot open the connection
In addition: Warning message:
In socketConnection(host = host, port = port, open = "ab", blocking =
blocking) :
localhost:7496
2016 Oct 01
2
socketSelect(..., timeout): non-integer timeouts in (0, 2) (?) equal infinite timeout on Linux - weird
There's something weird going on for certain non-integer values of
argument 'timeout' to base::socketSelect(). For such values, there is
no timeout and you effectively end up with an infinite timeout. I
can reproduce this on R 3.3.1 on Ubuntu 16.04 and RedHat 6.6, but not
on Windows (via Linux Wine).
# 1. In R master session
> con <- socketConnection('localhost', port