similar to: R 3.2.2 - make check and install package hang

Below is the output. Thanks for the help. > Sys.getenv() BASH_FUNC_module() () { eval `/cm/local/apps/environment-modules/3.2.10/Modules/$MODULE_VERSION/bin/modulecmd bash $*` } COLUMNS 152 CPATH /cm/shared/apps/uge/8.2.1/include CVS_RSH ssh DISPLAY localhost:10.0 EDITOR

On Sat, Oct 17, 2015 at 9:04 PM, McCully, Dwayne (NIH/NIAMS) [C] <dmccully at mail.nih.gov> wrote: > Hello Everyone, > > After trying several ways to compile R 3.2.2 without luck, I?m reaching out for help. > The ?make check? does not hanges for some reason and when > trying to install a package it cannot list the download sites (see below). > > What could be the

Hi R-devel, I'm trying to get R 3.2.1 working on Haiku (an open source OS inspired by BeOS, not Linux based) on i586. With a few small changes to library paths and ifdefs I am able to get a seemingly working R binary. The build process stops with the 'tools' package. The last lines from make are below. Does anyone have any tips? I'm rather new to debugging at this low level. Are

Hi all, Note: selinux was in permissive prior to error Got this with a yum update: abrt_version: 2.0.8 cgroup: cmdline: semodule -n -r oracle-port -b base.pp.bz2 -i accountsd.pp.bz2 ada.pp.bz2 cachefilesd.pp.bz2 cpufreqselector.pp.bz2 chrome.pp.bz2 awstats.pp.bz2 abrt.pp.bz2 aiccu.pp.bz2 amanda.pp.bz2 afs.pp.bz2 apache.pp.bz2 arpwatch.pp.bz2 audioentropy.pp.bz2 asterisk.pp.bz2

Dear knowledgeable experts :-), I am trying to get openmpi, Rmpi and SNOW running on a Myrinet/GM cluster. I'm not an IT expert, but I surely could use a working installation of Rmpi and SNOW. I try to load the Rmpi library and get the following: > library(Rmpi) [master:07230] mca: base: component_find: unable to open osc pt2pt: file not found (ignored)

Hello to all, i'm trying to install the german tax software "Tax@2006". using: wine 0.9.5 on ubuntu 5.10 I type "wine z:/setup.exe" (z = wine's dos-device cdrom). the follonwing steps follows: - Splash Screen "Buhl Data" - Installshield preparing installation... - Installshield starts, but brings a Popup: - Message: "Failed to extract

Below is a crash I get on my gentoo box when I execute the set command in wcmd. I believe the problem is caused by wine using the entire enviornment from my linux machine: john@jmd0 ~ $ wcmd WCMD Version 0.17 W:\home\john>set ALLUSERPROFILE=c:\windows\Profiles\Administrator ALLUSERSPROFILE=c:\windows\Profiles\Administrator ANT_HOME=/usr/share/ant-core CLASSPATH=. COLORTERM=

On 14/08/2015 15:19, Joe S wrote: > Hi R-devel, > I'm trying to get R 3.2.1 working on Haiku (an open source OS inspired by > BeOS, not Linux based) on i586. With a few small changes to library paths > and ifdefs I am able to get a seemingly working R binary. The build process > stops with the 'tools' package. The last lines from make are below. > > Does anyone

Okay so I have just installed Fedora 16 64-bit. Coming from a Ubuntu user I'm well aware that counter strike source works great under linux. I've been trying to get it to work but every time I try to load it, it loads for a moment and then crashes. I have the proprietary AMD ATI drivers for my ATI Radeon HD 5750. They seem to be rendering fine according to the debugger. I'm currently

Hi All, I just had "an issue" with my Linux 2.6.1 kernel. While working, I tried to rf -rf a directory, and was told my filesystem was mounted readonly (which it wasn't). I then shut the machine down, and on shutdown, I got a "kernel BUG at fs/ext3/super.c: 411". Full report below: Mike [1.] One line summary of the problem: Filesystem became readonly, then

OK, here's the diff file: Code: --- environment.before.reboot.txt 2011-07-19 17:43:58.200205228 +0100 +++ environment.after.reboot.txt 2011-07-19 17:53:07.549616184 +0100 @@ -1,16 +1,16 @@ ORBIT_SOCKETDIR=/tmp/orbit-charlie -SSH_AGENT_PID=2912 +SSH_AGENT_PID=2337 TERM=xterm SHELL=/bin/bash -XDG_SESSION_COOKIE=2dd5655fe15f1c42f474dd204c45c6b6-1311075950.779608-828425652

Dear list, I am syncing files with rsync .... surprise surprise ... Rsync claims files to be uptudate, but they are not ... >From the log: export/opt/bup/status/1 is uptodate export/opt/bup/status/2 is uptodate . . Source directory (locally on server): -rw-r--r-- 1 root root 28 2008-03-01 22:44 1 -rw-r--r-- 1 root root 28 2008-03-01 22:37 2 . . Destination directory (nfs share):

http://bugzilla.mindrot.org/show_bug.cgi?id=1004 Summary: X11 forwarding not working with ssh3.9p1 (Error: Can't open display) Product: Portable OpenSSH Version: 3.9p1 Platform: All OS/Version: Linux Status: NEW Severity: major Priority: P2 Component: Miscellaneous

The system I am using is a clean install of Mandrake 8.0 which has the gcc version 2.96 installed. I downloaded the wine-20010510 snapshot and successfully ran the ./tools/wininstall. The build seems to have run without problems and if I type: wine --version the correct release number is displayed indicating the install was also succesful. As per the FAQ I also did the following:

Good afternoon, A strange one - library(rJava) works for root but not for user sean On 64-bit Ubuntu 9.10, using R as root (sudo -i), I can say library(rJava) and it works fine with no error message of any kind. But logged in as myself user "sean", it can't start... sean at SeansPC:~$ R --no-save --vanilla R version 2.10.1 (2009-12-14) Copyright (C) 2009 The R Foundation for

Apologies in advance for the long post. I'm currently using a Makefile to build my shared library. Pursuant to the R-exts manual, I'd like to switch to a Makevars file or a configure file if necessary. Having never used these types of make utilities before, I'm a bit lost. My package is quite simple. It only has one source file and one header: excelpoi.cpp excelpoi.h The reason I

Installing rJava fails consistently, whether installed via the command line as below, or through "install.packages( 'rJava' )", and whether 0.84 or 0.85 is used, with the message :- "checking JNI data types... configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to

Hello , There is a way to source /etc/profile inside puppet on demand? My problem is that I install Java, afterwards I set JAVA_HOME variable in /etc/profile. After Java is installed, a gem which depends on Java starts to install ... but as it needs JAVA_HOME environment to be set, it fails. I am not sure what can I do ... Thank you, Adrian -- You received this message because you are

Hi! I?m on macOS 10.13.3 and just installed the new Java 10 using Homebrew Cask. I also have installed R with Homebrew. Everything seems to work fine, however I just get different outputs if I run sudo R CMD javareconf or R CMD javareconf. With sudo I get pointed to Java 9 and without sudo I get pointed to Java 10. I really don?t know why. Without sudo: $ R CMD javareconf

I am not a Mac user, but I do use Linux and I would recommend not running R with sudo unless you are an admin ninja. That defensive practice would render the answer to your question moot. It is possible that your problem may have started with inappropriate use of sudo in configuring java, but configuring Java is not on-topic here. -- Sent from my phone. Please excuse my brevity. On March 27,