Displaying 20 results from an estimated 20000 matches similar to: "RFC: Declaring "foo.bar" as nonS3method() ?!"
2015 Jun 12
2
RFC: Declaring "foo.bar" as nonS3method() ?!
>>>>> Duncan Murdoch writes:
> On 12/06/2015 4:12 AM, Martin Maechler wrote:
>> This is a topic ' "apparent S3 methods" note in R CMD check '
>> from R-package-devel
>> https://stat.ethz.ch/pipermail/r-package-devel/2015q2/000126.html
>>
>> which is relevant to here because some of us have been thinking
>> about extending
2015 Jun 12
3
RFC: Declaring "foo.bar" as nonS3method() ?!
>>>>> Duncan Murdoch writes:
> On 12/06/2015 7:16 AM, Kurt Hornik wrote:
>>>>>>> Duncan Murdoch writes:
>>
>>> On 12/06/2015 4:12 AM, Martin Maechler wrote:
>>>> This is a topic ' "apparent S3 methods" note in R CMD check '
>>>> from R-package-devel
>>>>
2015 Jun 12
3
RFC: Declaring "foo.bar" as nonS3method() ?!
On 12/06/2015 10:53 AM, Hadley Wickham wrote:
> To me, it seems like there's actually two problems here:
>
> 1) Preventing all() from dispatching to all.effects() for objects of
> class effects
> 2) Eliminating the NOTE in R CMD check
>
> My impression is that 1) actually causes few problems, particularly
> since people are mostly now aware of the problem and avoid
2015 Jun 13
1
RFC: Declaring "foo.bar" as nonS3method() ?!
>>>>> Luke Tierney <luke-tierney at uiowa.edu>
>>>>> on Fri, 12 Jun 2015 10:30:29 -0500 writes:
> The notes available off the devloper page
> https://developer.r-project.org/ describe some of the rationale for
> the S3 method search design. One thing that has changed since then is
> that all packages now have name spaces. We
2015 Jun 12
0
RFC: Declaring "foo.bar" as nonS3method() ?!
And my non-cross-posted cross-posting:
"Dear Martin,
Thank you for addressing this issue. Introducing a nonS3method() directive in NAMESPACE seems a reasonable solution. It could replace export() for functions with "."s in their names.
Best,
John"
On Fri, 12 Jun 2015 10:12:07 +0200
Martin Maechler <maechler at stat.math.ethz.ch> wrote:
> This is a topic '
2015 Jun 12
0
RFC: Declaring "foo.bar" as nonS3method() ?!
On 12/06/2015 4:12 AM, Martin Maechler wrote:
> This is a topic ' "apparent S3 methods" note in R CMD check '
> from R-package-devel
> https://stat.ethz.ch/pipermail/r-package-devel/2015q2/000126.html
>
> which is relevant to here because some of us have been thinking
> about extending R because of the issue.
>
> John Fox, maintainer of the
2015 Jun 12
0
RFC: Declaring "foo.bar" as nonS3method() ?!
On 12/06/2015 7:16 AM, Kurt Hornik wrote:
>>>>>> Duncan Murdoch writes:
>
>> On 12/06/2015 4:12 AM, Martin Maechler wrote:
>>> This is a topic ' "apparent S3 methods" note in R CMD check '
>>> from R-package-devel
>>> https://stat.ethz.ch/pipermail/r-package-devel/2015q2/000126.html
>>>
>>> which is
2015 Jun 12
0
RFC: Declaring "foo.bar" as nonS3method() ?!
To me, it seems like there's actually two problems here:
1) Preventing all() from dispatching to all.effects() for objects of
class effects
2) Eliminating the NOTE in R CMD check
My impression is that 1) actually causes few problems, particularly
since people are mostly now aware of the problem and avoid using `.`
in function names unless they're S3 methods. Fixing this issue seems
like
2015 Jun 12
0
RFC: Declaring "foo.bar" as nonS3method() ?!
The notes available off the devloper page
https://developer.r-project.org/ describe some of the rationale for
the S3 method search design. One thing that has changed since then is
that all packages now have name spaces. We could change the search
algorithm to skip attached package exports (and package imports and
base), which would require methods defined in packages that are to be
accessible
2015 Jun 12
0
declaring nonS3method
If Martin's proposal for declaring non-S3 methods in NAMESPACE is
feasible, it would be very helpful. The packages we support have
multiple examples of unfortunately named functions non-S3 functions, so
creating a route for migrating them into compliance would be great.
best,
-skye
On 06/12/2015 03:00 AM, r-package-devel-request at r-project.org wrote:
> Message: 11
> Date: Fri,
2009 Apr 28
2
effects package --- add abline to plot
Hello, I am not having success in a simple task. Using the effects package, I would like to add reference lines at probability values of 0.1 – 0.6 on a plot of the effects. The plot command works, but following up with an abline command produces the message “plot .new has not been called yet”, and of course the reference lines were not added.
Looking through past R help lists, there was a
2013 Feb 16
1
odd behavior within R2HTML
Dear R People:
I'm using R2HTML but having a strange result.
Here is the original data:
resp trt block
90.3 A I
89.2 A II
98.2 A III
93.9 A IV
87.4 A V
97.9 A VI
92.5 B I
89.5 B II
90.6 B III
94.7 B IV
87.0 B V
95.8 B VI
85.5 C I
90.8 C II
89.6 C III
86.2 C IV
88.0 C V
93.4 C VI
82.5 D I
89.5 D II
85.6 D III
87.4 D IV
78.9 D V
90.7 D VI
And here are the commands:
> resin1.df <-
2009 Jan 31
1
interaction plot in R for factorial experiment
hi,
i did a 2^4 factorial experiment, and i got the following result:
Effect t p (computer)
p -484.52494328125 -5.64590926071629 <0.0001
d -450.67095078125 -5.25142684568607 <0.0001
pd 438.80508046875 5.11316022388923 0.0001
t 351.87216640625 4.1001776078805 0.0008
pt -341.05023984375 -3.97407550262202 0.0011
dt -311.27784109375
2010 Jun 17
1
Problems using allEffects() (package effect)
Dear R users,
I have some trouble using the allEffects() function to compute and
display effect plots for a linear model.
My data is quite simple, it concerns effects of 3 treatments on the
tumoral volume of mice. vTum codes for the qualitative initial volume,
from small to big, temps is the time in month since beginning of
treatment, and S?rie codes for the batch. Data is unbalanced.
>
2009 Feb 10
1
Putting values and axis X labels on the charts based on allEffects
Dear everybody!
Need help with graphics. I am runnig a simple lm and then using
allEffects from 'effects' package:
require(effects)
model<-lm(Y~A+B, data=mydataframe)
I am trying to build (for each predictor - A and then B) a plot of means on Y.
I was successful doing it like this - in one swoop:
ml.eff<-allEffects(ml1, se=F)
plot(ml.eff,ylab="Title of Y")
Is it
2004 Sep 17
3
Function some()
Dear R-devel list members,
Probably not an opportune time for this, given the immanent release of
2.0.0, but I was just reminded (while preparing a lecture) of a function
that I find useful and that I though might be a candidate for the utils
package: The function, which I call some(), behaves like head() and tail(),
from which it is adapted, except that it samples from an object (e.g., rows
of a
2010 Mar 09
1
Help with adding points to allEffects plot
Thanks in advance for any help.
I am attempting to add points to a plot using the allEffects command in the
effects package. When I try to add the points I get the following error
message:
Error in plot.xy(xy.coords(x, y), type = type, ...) :
plot.new has not been called yet
Strangely, using the code I've pasted below this has worked for me in the
past however figuring out what has
2007 Aug 30
2
Fujitsu RX200 S3
Alle,
I am trying to install CentOS 5 on a Dual Xeon 5160 FJ RX200 S3. The
RAID hardware is an internal LSI MPT 1068 SAS/RAID controller (LSI
1068SASIME-2300). I have downloaded the drivers (mptsas, mptscsih and
mptbase) and created the required floppy.
When I run linux dd after booting from either the DVD or Disk 1 of the
CentOS distro, it says it loads mptsas, mptbase and mptscsih and
2017 Nov 11
1
effects package x axis labels
Dear All,
probably a simple enough solution but don;t seem to be able to get my head around it...example based on a publicly available data set:
mydata <- read.csv("https://stats.idre.ucla.edu/stat/data/binary.csv")
mylogit <- glm(admit ~ gre + gpa + rank, data = mydata, family = "binomial")
library(effects)
plot(allEffects(mylogit)
? ?
2010 Oct 02
1
Possible Bug in Effects Package
Dear List,
I find Effects package very useful, but I believe I have found a bug in
allEffects function. Please consider the following code:
test <- data.frame(tries= round(runif(40, 5, 300)),
tra = gl(4, 10, labels = c("V", "D", "C", "L")),
prop= runif(40, 0, 1))
test$success <- round(with(test, tries*prop))
test$prop <- with(test,