Displaying 20 results from an estimated 3000 matches similar to: "R_HOME default setting"
2015 Mar 09
3
Rstudio R-devel libR.so
Dear All,
I am actually on R-devel using shell consol. When I run RStudio, it can't
find libR.so in the new /lib folder where is libRblas.so libRlapack.so.
At first step I configure R-devel to share library with ./configure
--enable-R-shlib.
when I copied libR.so from /usr/lib/R/lib/libR.so (stable version R 3.1)
to /usr/local/R-devel/lib/libR.so (R-devel version), That doesn't work.
2015 Mar 09
3
Rstudio R-devel libR.so
Dear All,
I am actually on R-devel using shell consol. When I run RStudio, it can't
find libR.so in the new /lib folder where is libRblas.so libRlapack.so.
At first step I configure R-devel to share library with ./configure
--enable-R-shlib.
when I copied libR.so from /usr/lib/R/lib/libR.so (stable version R 3.1)
to /usr/local/R-devel/lib/libR.so (R-devel version), That doesn't work.
2018 Jan 12
2
Help with packages (methods, stats, stats4)
Yes,
You are right. I mean
install.packages('DVstats').
Actually, it seems that DVstats does not have maintainer
https://github.com/USGS-R/DVstats
Karim
On Fri, Jan 12, 2018 at 7:20 PM, Duncan Murdoch <murdoch.duncan at gmail.com>
wrote:
> On 12/01/2018 1:11 PM, Karim Mezhoud wrote:
>
>> Hi,
>> Did you try install.packages('stats').
>>
>
> That
2015 Mar 30
2
Debian Testing: ~/.Renviron seems to not being read (R_LIBS not set)
Hi,
I have Debian Testing running on a Lenovo Thinkpad X1
Carbon (2015, 3rd gen.). I would like to have a package library
independent of the installed R version. Under Ubuntu, I used to
have the following line in ~/.Renviron:
R_LIBS=/usr/local/R/library:/usr/lib/R/site-library This worked
fine and /usr/local/R/library showed up in .libPaths().
However, under Debian (with the same ~/.Renviron),
2018 Jan 12
0
Help with packages (methods, stats, stats4)
On 12/01/2018 1:25 PM, Karim Mezhoud wrote:
> Yes,
> You are right. I mean
> install.packages('DVstats').
That won't work either, because DVstats is not on CRAN.
> Actually, it seems that DVstats does not have maintainer
> https://github.com/USGS-R/DVstats
You can try
install.packages("devtools") # if not already installed...
2017 Feb 09
2
R CMD check error
Martin,
I am aware of --vanilla; I use it myself for some testing. In this case R_LIBS_USER was
set externally (part of my login) and does not involve any of the R scripts. That means
it is inherited by any subprocess. For example:
tmt1495% R --vanilla --no-environ
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
2020 Mar 19
2
R CMD check --as-cran attempts to hide R_LIBS_USER but fails
AFAIU, 'R CMD check --as-cran' tries to hide any site and user package
libraries by setting R_LIBS_SITE and R_LIBS_USER. However, contrary
to R_LIBS_SITE, it fails for R_LIBS_USER and the user's personal
library is still available for test scripts. Should I revise my
assumptions, or is that intentional?
The short version. Shouldn't:
$ R_LIBS_USER='' Rscript --vanilla -e
2020 Mar 19
1
R CMD check --as-cran attempts to hide R_LIBS_USER but fails
On Wed, Mar 18, 2020 at 8:04 PM Dirk Eddelbuettel <edd at debian.org> wrote:
>
>
> On 18 March 2020 at 19:19, Henrik Bengtsson wrote:
> | AFAIU, 'R CMD check --as-cran' tries to hide any site and user package
> | libraries by setting R_LIBS_SITE and R_LIBS_USER. However, contrary
>
> What makes you think that? AFAIK --as-cran just sets a bunch of the (nearly
2018 Jan 12
2
Help with packages (methods, stats, stats4)
Hi,
Did you try install.packages('stats').
Let we know about your Sys.info()
Karim
On Fri, Jan 12, 2018 at 5:37 PM, imane hajar <imane.chafiki.fst at gmail.com>
wrote:
> hello ,
>
> i am so sorry , i figure it out.
>
> im sending this msj to the moderator to stop the approval of the mail .
>
> have a good day.
>
>
> 2018-01-12 15:42 GMT+00:00 imane
2009 Jul 21
1
Customization options with .Renviron, R_LIBS, .Rprofile etc
Hi,
I am interested in customizing the installation of R. I have
gone through the ?R Installation and Administration? manual. But some
of the stuff is not clear to me and I would like to get clarifications
on the following points (for a Windows installation with
R_HOME=C:\\R\\R-2.9.1 ) :
1. I understand that I need to create a
file, .Renviron with the following path : R_HOME\\etc\\.Renviron where
2018 Jan 12
0
Help with packages (methods, stats, stats4)
On 12/01/2018 1:11 PM, Karim Mezhoud wrote:
> Hi,
> Did you try install.packages('stats').
That will not work, as stats is a base package. It comes with R, and
can't be changed. The stats package should never be missing in a proper
install of R.
Duncan Murdoch
> Let we know about your Sys.info()
> Karim
>
> On Fri, Jan 12, 2018 at 5:37 PM, imane hajar
2015 Mar 30
2
Debian Testing: ~/.Renviron seems to not being read (R_LIBS not set)
Dear Johannes, Dear Dirk,
Thanks a lot for helping. Here is the missing information.
Here is how I installed R. This is basically how Martin Maechler
showed me to install R under Ubuntu (in several versions so that they
are also recognized by ESS). My goal is to adjust this to make it work
for Debian:
1) sudo emacs /etc/apt/sources.list # then add:
deb
2010 Jul 01
1
How best to set library search path so user libraries come first
I want my local libraries to have priority over the system installed
ones, which, as far as I can make out from help(".libPaths"), means they
have to come first in that list (it doesn't actually_say_ so, but that
seems to be the idea).
We have R_LIBS_USER which looks made for specifying where I keep my own
libraries. Unfortunately it comes last in .libPaths() [which appears to
2017 Sep 16
1
R_LIBS_USER not in libPaths
I have not intentionally set R_LIBS_USER. I looked for an Renviron.site
file but did not see it in R/etc or my home directory. The strange part is
that if I print Sud.getenv I see a value for R_LIBS_USER. However, this
directory is not showing under libPaths.
I though .libPaths should contain R_LIBS_USER.
I also noticed that R related variables are not in the system or user
variables because I
2015 Mar 09
0
Fwd: Rstudio R-devel libR.so
Hi,
I forgot
tools/rsync-recommended
before
./configure
Thanks
On Mon, Mar 9, 2015 at 6:51 PM, Kevin Ushey <kevinushey at gmail.com> wrote:
> I believe you need to set the environment variable R_HOME_DIR to the
> path pointing to your R-devel installation before launching RStudio.
>
> On Mon, Mar 9, 2015 at 9:49 AM, Karim Mezhoud <kmezhoud at gmail.com> wrote:
>
2017 Feb 08
2
R CMD check error
I have a local library which depends on the expm library. The expm library is loaded into
my personal space and I have the environment variable R_LIBS_USER set appropriately. The
command "library(expm)" works just fine from the command line, and in fact the package
works if I do the source() and dyn.load() commands by hand.
The following sequence works:
tmt% R CMD build
2017 Sep 16
0
R_LIBS_USER not in libPaths
I'm not sure I follow what.the problem is. Are you trying to
set R_LIBS_USER but R does not acknowledge it, or do you observe something
in R that you didn't expect to be there and you are trying to figure out
why that is / where that happens?
Henrik
On Sep 16, 2017 07:10, "Rene J Suarez-Soto" <rene.j.suarez at gmail.com> wrote:
> I have a computer where R_LIBS_USER is
2019 Jan 06
2
change default path for installing r-cran packages by sudo apt r-cran...?
dear dirk,
i am following up on our thread on r-help-mailinglist. you advised me to
bring it over here.
when installing packages from within R, they usually go to a directory
defined in R_LIBS_USER, which i have it set in .Renviron.
when installing packages via sudo apt install r-cran-.., they go to
/usr/lib/R/site-library.
is there a possibility to have packages installed to the R_LIBS-USER
2017 Sep 16
4
R_LIBS_USER not in libPaths
I have a computer where R_LIBS_USER is not found in libPaths. This is for
Windows (x64). I ran R from the command line, RGui and RStudio and I get
the same results. I also ran R --vanilla and I still get the discrepancy.
The only thing I found interesting was that I also ran SET from the command
line and the "R related variables" (e.g., R_HOME; R_LIBS_USER) are not
there. Therefore
2011 Nov 21
1
Setting hostname in the .Renvironment
This is a follow-up to a question I asked a few years back. We have a pair
of computers that share a common home directory (and therefor a common
.Renviron) with identical hardware, but very different sets of libraries
such that using a "shared" R_LIBS between two computers does not work.
They both use this as the default library for user installations: