similar to: setequal: better readability, reduced memory footprint, and minor speedup

Displaying 20 results from an estimated 8000 matches similar to: "setequal: better readability, reduced memory footprint, and minor speedup"

2015 Jan 08
3
setequal: better readability, reduced memory footprint, and minor speedup
How about unique them both and compare the lengths? It's less work, especially allocation. Pete ____________________ Peter M. Haverty, Ph.D. Genentech, Inc. phaverty at gene.com On Thu, Jan 8, 2015 at 1:30 PM, peter dalgaard <pdalgd at gmail.com> wrote: > If you look at the definition of %in%, you'll find that it is implemented > using match, so if we did as you suggest,
2015 Jan 08
0
setequal: better readability, reduced memory footprint, and minor speedup
If you look at the definition of %in%, you'll find that it is implemented using match, so if we did as you suggest, I give it about three days before someone suggests to inline the function call... Readability of source code is not usually our prime concern. The && idea does have some merit, though. Apropos, why is there no setcontains()? -pd > On 06 Jan 2015, at 22:02 , Herv?
2015 Jan 08
0
setequal: better readability, reduced memory footprint, and minor speedup
I was thinking something like: setequal <- function(x,y) { xu = unique(x) yu = unique(y) if (length(xu) != length(yu)) { return FALSE; } return (all( match( xu, yu, 0L ) > 0L ) ) } This lets you fail early for cheap (skipping the allocation from the ">0L"s). Whether or not this goes fast depends a lot on the uniqueness of x and y and whether or not you want to optimize for
2017 May 15
2
stopifnot() does not stop at first non-TRUE argument
>>>>> Herv? Pag?s <hpages at fredhutch.org> >>>>> on Wed, 3 May 2017 12:08:26 -0700 writes: > On 05/03/2017 12:04 PM, Herv? Pag?s wrote: >> Not sure why the performance penalty of nonstandard evaluation would >> be more of a concern here than for something like switch(). > which is actually a primitive. So it seems that
2017 Nov 29
2
binary form of is() contradicts its unary form
Hi Mehmet, On 11/29/2017 11:22 AM, Suzen, Mehmet wrote: > Hi Herve, > > I think you are confusing subclasses and classes. There is no > contradiction. `is` documentation > is very clear: > > `With one argument, returns all the super-classes of this object's class.` Yes that's indeed very clear. So if "list" is a super-class of "data.frame" (as
2019 Mar 22
2
selectMethod() can fail to find methods in situations of multiple dispatch
Fine with me as long as eliminating the inconveniences associated with it can be put on the roadmap. The alias instability and the fact that the user has no way to know if s/he should do ?`foo,numeric-method` or ?`foo,numeric,ANY-method` to find the method has been a long-standing problem. H. On 3/21/19 21:29, Michael Lawrence wrote: If we started over, I'd try to avoid this sort of
2016 Mar 19
2
unary class union of an S3 class
On 03/19/2016 01:22 AM, Michael Lawrence wrote: > > > On Sat, Mar 19, 2016 at 12:10 AM, Herv? Pag?s <hpages at fredhutch.org > <mailto:hpages at fredhutch.org>> wrote: > > On 03/18/2016 03:28 PM, Michael Lawrence wrote: > > > On Fri, Mar 18, 2016 at 2:53 PM, Herv? Pag?s > <hpages at fredhutch.org <mailto:hpages at
2015 Sep 29
3
making object.size() more meaningful on environments?
Hi, Currently object.size() is not very useful on environments as it always returns 56 bytes, no matter how big the environment is: env1 <- new.env() object.size(env1) # 56 bytes env2 <- new.env(hash=TRUE, size=75000000L) object.size(env2) # 56 bytes env3 <- list2env(list(a=runif(25000000), L=LETTERS)) object.size(env3) # 56 bytes This makes it pretty useless on
2018 Jan 30
2
as.list method for by Objects
by() does not always return a list. In Gabe's example, it returns an integer, thus it is coerced to a list. as.list() means that it should be a VECSXP, not necessarily with "list" in the class attribute. Michael On Tue, Jan 30, 2018 at 2:41 PM, Herv? Pag?s <hpages at fredhutch.org> wrote: > Hi Gabe, > > Interestingly the behavior of as.list() on by objects seem to
2019 Mar 22
2
selectMethod() can fail to find methods in situations of multiple dispatch
Hi Michael, Thanks for looking into this. I suspect that truncation of ANY suffixes from method signatures is also the culprit behind the sudden breakage of aliases of the form \alias{foo,numeric-method} when a method without the ANY suffix in its signature gets added to the ecosystem. See my post about this to the Bioc-devel mailing list a couple of months ago:
2017 May 03
2
stopifnot() does not stop at first non-TRUE argument
Not sure why the performance penalty of nonstandard evaluation would be more of a concern here than for something like switch(). If that can't/won't be fixed, what about fixing the man page so it's in sync with the current behavior? Thanks, H. On 05/03/2017 02:26 AM, peter dalgaard wrote: > The first line of stopifnot is > > n <- length(ll <- list(...)) > >
2020 Mar 27
1
object.size vs lobstr::obj_size
On 3/27/20 15:19, Hadley Wickham wrote: > > > On Fri, Mar 27, 2020 at 4:01 PM Herv? Pag?s <hpages at fredhutch.org > <mailto:hpages at fredhutch.org>> wrote: > > > > On 3/27/20 12:00, Hadley Wickham wrote: > > > > > > On Fri, Mar 27, 2020 at 10:39 AM Herv? Pag?s > <hpages at fredhutch.org <mailto:hpages at
2020 May 22
2
paste(character(0), collapse="", recycle0=FALSE) should be ""
I agree with Herve, processing collapse happens last so collapse=non-NULL always leads to a single character string being returned, the same as paste(collapse=""). See the altPaste function I posted yesterday. Bill Dunlap TIBCO Software wdunlap tibco.com On Fri, May 22, 2020 at 9:12 AM Herv? Pag?s <hpages at fredhutch.org> wrote: > I think that > >
2020 Mar 27
2
object.size vs lobstr::obj_size
On 3/27/20 12:00, Hadley Wickham wrote: > > > On Fri, Mar 27, 2020 at 10:39 AM Herv? Pag?s <hpages at fredhutch.org > <mailto:hpages at fredhutch.org>> wrote: > > Hi Tomas, > > On 3/27/20 07:01, Tomas Kalibera wrote: > > they provide an over-approximation > > They can also provide an "under-approximation" (to say the
2020 May 22
2
paste(character(0), collapse="", recycle0=FALSE) should be ""
Hi Martin et al, On Thu, May 21, 2020 at 9:42 AM Martin Maechler <maechler at stat.math.ethz.ch> wrote: > >>>>> Herv? Pag?s > >>>>> on Fri, 15 May 2020 13:44:28 -0700 writes: > > > There is still the situation where **both** 'sep' and 'collapse' are > > specified: > > >> paste(integer(0),
2017 Nov 29
2
binary form of is() contradicts its unary form
Hi, The unary forms of is() and extends() report that data.frame extends list, oldClass, and vector: > is(data.frame()) [1] "data.frame" "list" "oldClass" "vector" > extends("data.frame") [1] "data.frame" "list" "oldClass" "vector" However, the binary form of is()
2017 May 15
3
stopifnot() does not stop at first non-TRUE argument
I see in the archives that the attachment cannot pass. So, here is the code: 8<---- stopifnot_new <- function (...) { mc <- match.call() n <- length(mc)-1 if (n == 0L) return(invisible()) Dparse <- function(call, cutoff = 60L) { ch <- deparse(call, width.cutoff = cutoff) if (length(ch) > 1L) paste(ch[1L],
2020 May 22
5
paste(character(0), collapse="", recycle0=FALSE) should be ""
Gabe, It's the current behavior of paste() that is a major source of bugs: ## Add "rs" prefix to SNP ids and collapse them in a ## comma-separated string. collapse_snp_ids <- function(snp_ids) paste("rs", snp_ids, sep="", collapse=",") snp_groups <- list( group1=c(55, 22, 200), group2=integer(0), group3=c(99,
2015 Sep 29
1
making object.size() more meaningful on environments?
Hi Gabe, On 09/29/2015 02:51 PM, Gabriel Becker wrote: > Herve, > > The problem then would be that for A a refClass whose fields take up N > bytes (in the sense that you mean), if we do > > B <- A > > A and B would look like the BOTH take up N bytes, for a total of 2N, > whereas AFAIK R would only be using ~ N + 2*56 bytes, right? Yes, but that's still a *much*
2019 Mar 14
2
selectMethod() can fail to find methods in situations of multiple dispatch
Here is an example: setGeneric("foo", function(x, y) standardGeneric("foo")) setMethod("foo", c("numeric", "ANY"), function(x, y) cat("I'm the foo#numeric#ANY method\n") ) Dispatch works as expected but selectMethod() fails to find the method: > foo(1, TRUE) I'm the foo#numeric#ANY method >