Displaying 20 results from an estimated 3000 matches similar to: "Having both R-current and R-devel installed on Ubuntu"
2012 Aug 08
2
Having both R-current and R-devel installed on Ubuntu
Dear List,
Having used R on Windows for years, I have recently installed Ubuntu as a virtual machine. I admit that I am quite new to the linux world.
Installing R (current version = 2.15.1) went smoothly, but I would like to have both the current version of R and R-devel installed. I've searched the net for info on doing this but so far without luck.
Can anyone help me getting this up and
2015 Aug 29
0
Having both R-current and R-devel installed on Ubuntu
On 29 August 2015 at 17:14, Liviu Andronic wrote:
| Hi Dirk,
| I too would need to get R-devel on my Ubuntu box (alongside an
| existing R installation) to check my packages, especially given the
| mayhem that awaits us when the new `R CMD check --as-cran` goes live.
| ( http://stat.ethz.ch/R-manual/R-devel/doc/html/NEWS.html )
|
| I was wondering if the script that you posted on r-sig-debian a
2016 Nov 11
1
installing R-devel on ubuntu
Hi All: I've been trying to install R-devel on my ubuntu 14.04 machine by
following the directions at this link.
http://singmann.org/installing-r-devel-on-linux/
The link is extremely clear and detailed but I run into an odd problem. When
I run the script at the bottom of this ( which I call build-R-devel ), the
following directory structure gets created.
:/usr/local/lib/R> dir
total 56
2017 Apr 19
5
R 3.4 has broken C++11 support
Hi!
Well, my linux distribution has very recent versions
of everything, so a working C++11 compiler exists:
$ gcc --version | head -n1
gcc (GCC) 6.3.1 20170306
Could wrong ./configure options be at fault here? See:
https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=r-devel#n40
My sessionInfo():
$ R-devel --slave -e 'sessionInfo()' | head -n3
R Under development (unstable)
2017 Apr 19
0
R 3.4 has broken C++11 support
On 19 April 2017 at 12:42, Angerer, Philipp via R-devel wrote:
| Well, my linux distribution has very recent versions
| of everything, so a working C++11 compiler exists:
|
| $ gcc --version | head -n1
| gcc (GCC) 6.3.1 20170306
|
| Could wrong ./configure options be at fault here? See:
|
| https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=r-devel#n40
|
| My sessionInfo():
|
| $ R-devel
2014 Apr 24
1
50% performance of custom R build compared to PPA R for a command
Hi,
I have R installed from the Ubuntu PPA and a local build of R (more
details below). I will refer to these as "R" and "R-devel",
respectively. I've reproduced the following on Ubuntu 13.10 and 14.04.
Below is an example (which requires the bootstrap package) that takes
10 seconds for me to run with R-devel and 5 seconds with R
library(bootstrap)
str(tooth)
theta <-
2015 Oct 13
2
gcc ubsan alignement test --minimal gcc version?
Dear All,
I'm trying to implement the section of the manual pertaining to the
gcc-ubsan test
carried by CRAN on my local computer (ubuntu 14.04):
http://www.stats.ox.ac.uk/pub/bdr/memtests/gcc-UBSAN/README.txt
I was wondering whether someone could tell what the minimal version
of the gcc tool chain needed to run the gcc-ASAN and gcc-UBSAN alignment
tests on ones local
2017 Apr 06
3
failure of make check-all
This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo).
The failure message is at the very end. (It's due to be replaced in a couple of weeks.)
The sequence of steps was
svn up
tools/rsync-recommended
./configure
make
make check-all |& tee zzz
Terry T.
Result of ./config
R is now configured for i686-pc-linux-gnu
Source directory: .
2015 Oct 19
1
R 3.2.2 - make check and install package hang
Below is the output. Thanks for the help.
> Sys.getenv()
BASH_FUNC_module() () { eval
`/cm/local/apps/environment-modules/3.2.10/Modules/$MODULE_VERSION/bin/modulecmd
bash $*` }
COLUMNS 152
CPATH /cm/shared/apps/uge/8.2.1/include
CVS_RSH ssh
DISPLAY localhost:10.0
EDITOR
2017 Apr 06
0
failure of make check-all
You may want to retry that after a make distclean, in case anything changed in the toolchain.
-pd
> On 6 Apr 2017, at 14:43 , Therneau, Terry M., Ph.D. <therneau at mayo.edu> wrote:
>
> This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo). The failure message is at the very end. (It's due to be replaced in a couple of weeks.) The sequence
2015 Oct 14
0
gcc ubsan alignement test --minimal gcc version?
Dear Prof. Ripley,
Thank you for your answer. I think I am way over my head here.
(Using Doker adds a level of complexity that I'm afraid I can't
manage for now so I am happy with building Rdevel and using it
in to run these tests).
After building Rdevel with what I think are the correct options**
(just to avoid mistakes I have also fully removed R from my system
just before and
2015 Jul 21
2
' --enable-R-shlib' problem when setting up R-devel in Linux Mint 17.1 64-bit
Dear list,
This is my first time trying to set up the development version of R
(R-devel ) in my local machine to test some packages before submitting
them to CRAN. I'm using Linux Mint 17.1 64-bit, which is an
Ubuntu-based distro.
However, I'm not able to correctly set up r-devel, apparently due to a
problem with enabling the shared library support.
I run the first script given by Dirk
2016 Feb 05
2
building R Devel --enable-R-shlib
Hello,
It has been a while since my last R Devel build, and now I'm running
into an issue I'm not sure how to isolate. After updating to the latest
SVN sources, and using:
---<--------------------cut here---------------start------------------->---
tools/rsync-recommended
R_PAPERSIZE=letter \
R_BATCHSAVE="--no-save --no-restore" \
R_BROWSER=xdg-open \
LIBnn=lib \
2015 Oct 17
3
R 3.2.2 - make check and install package hang
Hello Everyone,
After trying several ways to compile R 3.2.2 without luck, I?m reaching out for help.
The ?make check? does not hanges for some reason and when
trying to install a package it cannot list the download sites (see below).
What could be the problem?
./configure --enable-R-shlib --enable-BLAS-shlib
hostname = test
uname -m = x86_64
uname -r = 2.6.32-573.7.1.el6.x86_64
uname -s =
2016 Feb 06
1
building R Devel --enable-R-shlib
On Fri, 5 Feb 2016 06:29:46 -0600,
Dirk Eddelbuettel <edd at debian.org> wrote:
> On 4 February 2016 at 22:56, Sebastian P. Luque wrote:
>> Hello,
>>
>> It has been a while since my last R Devel build, and now I'm running
>> into an issue I'm not sure how to isolate. After updating to the
>> latest SVN sources, and using:
>>
>>
2013 Jun 08
3
R CMD INSTALL and file permission settings
Summary:
The directory /usr/local/lib/R/site-library can be used for site-wide
multi-user installations of R.
This is even the default on Debian and Ubuntu (following a suggestion by
Kurt and Fritz a decade ago over beers -- what could be better). However,
R enforces wrong permissions on directories and files there (removing
group-write) which effectively defeats this purpose,
2024 Jan 10
1
Sys.which() caching path to `which`
Hello R-devel,
Currently on Unix-like systems, Sys.which incorporates the absolute
path to the `which` executable, obtained at the configure stage:
> ## hopefully configure found [/usr]/bin/which
> which <- "@WHICH@"
> if (!nzchar(which)) {
> warning("'which' was not found on this platform")
This poses a problem for the Spack package
2011 Apr 26
1
question releated to Makefile dependencies
I changed my configure + build 1-liner of wine :
$>export CFLAGS="-O2 -march=native -pipe -g -ggdb"; export CXXFLAGS="$CFLAGS";
export CC="ccache gcc"; ./configure --enable-tests; make -j 2
with respect to the CFLAGS and wonders now, why make after the "make depend"
step didn't found anything new to build.
Doesn't depend the main target from
2011 Aug 20
4
trouble installing 1.9.2
hello,
I am trying install Ruby 1.9.2 on my MacBook Pro Lion. I am following
along with the install instructions at ruby.railstutorial.org. I am the
point were you run rvm install 1.9.2. Below in what I see in the
terminal when installing and below that my rvm log. Thanks for any help.
rvm install 1.9.2
Installing Ruby from source to: /Users/user/.rvm/rubies/ruby-1.9.2-p290,
this may take a
2011 Sep 29
3
grep and PCRE fun
Hello,
I think I've found a bug in the C function do_grep located in
src/main/grep.c. It seems to affect both the latest revisions of
R-2-13-branch and trunk when compiling R without optimizations and
with it's own version of pcre located in src/extra, at least on ubuntu
10.04.
According to the pcre_exec API (I presume the later versions), the
ovecsize argument must be a multiple of 3 ,