similar to: Debian Testing: ~/.Renviron seems to not being read (R_LIBS not set)

On Thu, Apr 2, 2015 at 5:49 AM, Johannes Ranke <jranke at uni-bremen.de> wrote: > Hi Marius, > > thanks for your reply. > >> > So maybe you could modify your instructions to the case where someone >> > wants to have R-devel in addition to the released R version, if that is >> > what you are aiming at? I could then add it to the README for Debian on

Dear Dirk, Dear Johannes, Thanks for helping, I could solve the problem. By reading your posts, I got a bit of the impression that questions beyond the 'standard installation' process are not really welcome on R-SIG-Debian. If this is the case, I'm sorry for my post. I wasn't aware of this, but Dirk makes it clear why on

Dear Johannes, Dear Dirk, Thanks a lot for helping. Here is the missing information. Here is how I installed R. This is basically how Martin Maechler showed me to install R under Ubuntu (in several versions so that they are also recognized by ESS). My goal is to adjust this to make it work for Debian: 1) sudo emacs /etc/apt/sources.list # then add: deb

Hi, I have Debian Testing running on a Lenovo Thinkpad X1 Carbon (2015, 3rd gen.). I would like to have a package library independent of the installed R version. Under Ubuntu, I used to have the following line in ~/.Renviron: R_LIBS=/usr/local/R/library:/usr/lib/R/site-library This worked fine and /usr/local/R/library showed up in .libPaths(). However, under Debian (with the same ~/.Renviron),

Hi, This is most likely only a minor technicality, but I saw the following: On page 6 of the 'parallel' vignette (http://stat.ethz.ch/R-manual/R-devel/library/parallel/doc/parallel.pdf), the random-number generator "L'Ecuyer-CMRG" is said to have seed "(x_n, x_{n-1}, x_{n-2}, y_n, y_{n-1}, y_{n-2})". However, in L'Ecuyer et al. (2002), the seed is given with

Dear all, I having a trouble installing R on debian 6 squeeze. Apt can not find some packages on repository. It seems like that some packages missed. Can you please help me with this? Thank you in advance. Harutyun khachatryan. P.S. It writing something like this. It doesn't depends on CRAN mirror. I have tried a lot of different CRAN mirrors with the same result. Err

Thanks Johannes to clarify this point. It makes more sense to me now. So I understand that the idea is to make it simpler without apt-pinning for less adventurous people (I mean normal people :)): just add jessie-cran3 repo and you're good to go. Am I also correct that jessie-cran3 is essentially a backport of Debian SID, with some (short?) delay? In other words, modulo a couple of days,

Hi, I installed Ubuntu 13.10 on Android 4.4.2 (Nexus 5). I also installed all the tools I have on my Desktop Ubuntu without problems on the Nexus 5 Ubuntu. I then wanted to install R-3.0.2 (from source). 'make' runs fine up to installing MASS: make[2]: Entering directory `/usr/local/R/R-3.0.2-build/src/library/Recommended' begin installing recommended package MASS During startup -

Hi! Where to set R_LIBS? I have .Renviron with the line. R_LIBS=/package/R/R-1.5.0/linux/lib/R/library/;/home/wolski/Rpack/ in my home directory but cant access any library stored in the /home/wolski/Rpack/? Eryk -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info",

Dear Johannes, Thanks a lot for this work! I have to admit that I'm now a little bit puzzled, though. I'm running Debian Jessie (current testing) with great satisfaction. When it comes to R, I simply have the SID repository (official Debian) enabled, with some pining to get only R-related stuff. Now, I'm not sure to understand the benefit of using the CRAN repository for Jessie?I

Dear List, Further to my earlier email, I note that, for me at least, R CMD check is *not* reading R_LIBS from ~/.R/check.Renviron on R 2.15.2 patched (r61228) and R Under Development (r61660). The only way I can get R CMD check to look for packages in a user-supplied library is by explicitly exporting R_LIBS set to the relevant directory. R CMD build *does* read R_LIBS from ~/.R/build.Renviron

Hi, I am interested in customizing the installation of R. I have gone through the ?R Installation and Administration? manual. But some of the stuff is not clear to me and I would like to get clarifications on the following points (for a Windows installation with R_HOME=C:\\R\\R-2.9.1 ) : 1. I understand that I need to create a file, .Renviron with the following path : R_HOME\\etc\\.Renviron where

On Tue, Feb 3, 2015 at 10:39 AM, Marius Hofert <marius.hofert at uwaterloo.ca> wrote: > Hi, > > This is most likely only a minor technicality, but I saw the > following: On page 6 of the 'parallel' vignette > (http://stat.ethz.ch/R-manual/R-devel/library/parallel/doc/parallel.pdf), > the random-number generator "L'Ecuyer-CMRG" is said to have seed >

Hello, I have a problem with package "python-rpy2" with Debian Wheezy repository. I use this repo : deb http://cran.r-project.org/bin/linux/debian wheezy-cran3/ This package depends on "python-singledispatch" but it doesn't exist in official Debian repo... Could you help me to fix this issue ? Thanks a lot,

Hi Simon, thanks for your quick reply. 1) ... so you can reproduce this? 2) Do you know a way how this can be 'foreseen'? We allocate larger matrices in the copula package depending on the user's input dimension. It would be good to tell her/him "Your dimension is quite large. Be aware of killers in your neighborhood"... before the killer attacks. Thanks & cheers,

Hi, Interesting "feature" in 10.11.4. I wonder if the process is killed before or after malloc() returns. If before, it seems very blunt: "You're asking too much and I don't like it so I kill you now". If after it doesn't look much better: "You're asking a lot and I don't like it but I give it to you anyway. I'll kill you quickly later". Why

Hello, I would like to plot a wireframe of a function which is defined on the unit square using the lattice library (for trellis-like plots). The plot contains z-values of about 100 (only in the neighborhood of zero) although most of the z-values are in the range of -let's say- 0 to 10. If I evaluate this function on an equidistant grid of 25 points on the unit square the plot quality is not

Dear R-developers, I would like to suggest a 'method' slot for format.ftable() (see an adjusted 'format.ftable()' below, taken from the source of R-2.15.2). At the moment, format.ftable() contains several empty cells due to the way the row and column labels are printed. This creates problems (= unwanted empty columns/rows) when converting an ftable to a LaTeX table; see an

Dear expeRts, I would like to create a plotmath-label of the form X_1^\prime. Here is how to *not* do it [not nicely aligned symbols]: plot(0,0,main=expression(italic(X*minute[1]))) plot(0,0,main=expression(italic(X[1]*minute))) plot(0,0,main=expression(italic(X)[1]*minute)) Any suggestions? Cheers, Marius

Dear expeRts, I would like to colorize the backgrounds of a pairs plot according to the respective panel number. Here is what I tried (without success): count <- 0 mypanel <- function(x, y, ...){ count <<- count+1 bg. <- if(count %in% c(1,4,9,12)) "#FDFF65" else NA points(x, y, cex=0.5, bg=bg) } U <- matrix(runif(4*500), ncol=4) pairs(U, panel=mypanel) I