similar to: Trouble building R 3.5.0 under Ubuntu 18.04

On Tue, May 22, 2018 at 6:47 PM, Steve Gutreuter <sgutreuter at gmail.com> wrote: > I would love to hear from anyone who has successfully built 3.5.0 under > Ubuntu 18.04 (Bionic Beaver). This is the wrong list, see R-sig-debian. That said, apt-get update apt-get build-dep r-base wget https://cran.r-project.org/src/base/R-3/R-3.5.0.tar.gz tar -xvf R-3.5.0.tar.gz cd R-3.5.0

I suspect the main difficulty the OP is having is building R with shlib support. Steve, can you build from source without the --enable-R-shlib flag on configure? Kevin On 05/23/2018 01:58 PM, Ista Zahn wrote: > On Tue, May 22, 2018 at 6:47 PM, Steve Gutreuter <sgutreuter at gmail.com> wrote: >> I would love to hear from anyone who has successfully built 3.5.0 under >>

All of my attempts to build R 3.5.0 from sources under Ubuntu 18.04 have failed, and I cannot figure out what I am doing wrong. I have tried may things, including : export LDFLAGS="$LDFLAGS -fPIC" export CXXFLAGS="$CXXFLAGS -fPIC" export CFLAGS="$CFLAGS -fPIC" ./configure --enable-R-shlib --prefix=/usr/lib/R/3.5.0 #### Configure completes normally without errors or

R 3.5.1 is installed under Linux Mint 19 from binaries r-base and r-base-dev from ubuntu bionic-cran35.? Mysteriously, packages using libRblas cannot be compiled.? I get: libRblas.so: cannot open shared object file: No such file or directory.? And indeed, I find no libRblas.so. Any ideas about how to fix this? Thanks, Steve

Thanks! ?"jammy" made it work. ? For some reason, ?lsb_release -cs is returning "victoria" rather than "jammy", and $> sudo apt update Hit:1 http://archive.ubuntu.com/ubuntu jammy InRelease Ign:2 http://packages.linuxmint.com victoria InRelease Get:3 http://archive.ubuntu.com/ubuntu jammy-updates InRelease [119 kB] Hit:4 http://packages.linuxmint.com victoria

(cross-posted on SO: https://stackoverflow.com/questions/78022766) Hi all, I'm trying to compile R as a static library with the -fPIC flag so I can use it within java+JNI (is it only possible ?), but I cannot find the right flags in '.configure' to compile R this way. I tested various flags but I cannot find the correct syntax. for now, my latest attempt was ``` rm -rvf?

I just upgraded from Linux Mint 20 to 21 and am no longer able to add the CRAN Ubuntu repository to my list of repositories. ?I am getting: $> sudo /usr/bin/add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/" $> sudo apt update Hit:1 http://security.ubuntu.com/ubuntu jammy-security InRelease Hit:2 http://archive.ubuntu.com/ubuntu jammy

On Mon, 04 Dec 2023 13:41:47 -0500 Steve Gutreuter <sgutreuter at gmail.com> wrote: > $> sudo /usr/bin/add-apt-repository "deb > https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release > -cs)-cran40/" Looks like `lsb_release -cs` returns a Mint codename for you. Thankfully, since we know that Linux Mint 21 is based on Ubuntu 22.04 "Jammy Jellyfish", it

I tried to install R-3.5.0 from source on my Ubuntu 18.04, and met this problem: ../../lib/libR.so: undefined reference to 'ucol_strcollIter_58' ../../lib/libR.so: undefined reference to 'u_getVersion_58' ../../lib/libR.so: undefined reference to 'uloc_setDefault_58' ../../lib/libR.so: undefined reference to 'ucol_close_58' ../../lib/libR.so: undefined reference to

Thanks Dirk! I wrongly thought the R-3.5.0 Binary was NOT default R for Ubuntu 18.04 as some of my R packages requires updated R version. Anyway, with your suggestion all went well like charm. Thank you very much! Back to the problem, actually I saw different versions of libicu* such as: /home/yifang/anaconda3/lib/libicudata.so.58

Dear Debian persons I would like enquire about whether the repository deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran35/ I tried to follow the instructions and I cannot get R3.5.1 - I get R3.4.4??? I have been able to install R3.5.1 on Ubuntu 16.02 using the xenial-cran35/ repository & so not sure if the bionic link is up to date? thanks in advance Regards Alison

For example, install.packages("emplik") is failing with: libRblas.so: cannot open shared object file: No such file or directory As Dirk pointed out, this is likely an error in the emplik package, Steve On 09/23/2018 09:57 AM, Ista Zahn wrote: > On Sat, Sep 22, 2018 at 4:08 PM Steve Gutreuter <sgutreuter at gmail.com> wrote: >> R 3.5.1 is installed under Linux Mint

I am building from source on RHEL 4 and have run into a problem while running "make check": running code in 'lapack.R' ...make[3]: *** [lapack.Rout] Error 1 make[3]: Leaving directory `/opt/R/R-2.9.1/tests' make[2]: *** [test-Specific] Error 2 make[2]: Leaving directory `/opt/R/R-2.9.1/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving

Hi, I am trying to release a Makefile for building my company's software that will be flexible enough to use the llvm suite of compilers to build shared libraries for talking to USB peripherals. The problem that I am having is that while I am able to build a shared library using llvm-gcc , the llvm-g++ compiler is giving me error messages saying " relocation R_X86_64_PC32 against

v1 was here: https://www.redhat.com/archives/libguestfs/2017-November/msg00068.html v1 -> v2: - Use a configure-time test. Rich.

The following code currently links incorrectly when linking against a dynamic libc on Ubuntu 12.10 unless -fpic is specified. #include <stdio.h> int main() { fputs("hi\n", stdout); } The reason is that stdout gets a R_X86_64_PC32 relocation, but is of type Object. The ELF writer can't see this, and assumes all R_X86_64_PC32 relocations in dynamic outputs are to functions

Updates to Linux Mint included an update to ESS. After the update, M-x R produces: load ESSR: + + + Error in file(filename, "r", encoding = encoding) : ? cannot open the connection In addition: Warning message: In file(filename, "r", encoding = encoding) : ? cannot open file ?/usr/share/ess/etc/ESSR/R/.load.R?: No such file or directory Any guesses? Thanks, Steve

Not totally sure about this. Perhaps we should make ./configure look for the right asmrun library? Or make it user-configurable? Rich.

Full_Name: Lukasz Andrzej Bartnik Version: 2.8.1 OS: RHELS 5.2 Submission from: (NULL) (194.181.94.250) Compile R for 32 bit on a 64 bit machine: unset LD_LIBRARY_PATH unset R_LD_LIBRARY_PATH export CC="gcc -m32" export CXXFLAGS="-m32 -O2 -g" export FFLAGS="-m32 -O2 -g" export FCFLAGS="-m32 -O2 -g" export OBJCFLAGS="-m32 -O2 -g" export LIBnn=lib

Hi, The following error occurs while executing 'make' after the successful configuration (./configure) on IBM-AIX 5.2 (GCC 4.2.4 installed): gcc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -mno-fp-in-toc -g -O2 -c vfonts.c -o vfonts.o gfortran -g