similar to: unable to move temporary installation of package

Thanks Jeff, So I initially when I got the computer moved my old packages into the new directory rather than downloading and installing them again. That was fine. I then just did a test to see if I could write in the folder and indeed I can. Just not via R. I uninstalled R Open, installed R 3.4.4, and the problem persisted, including just running it from the R console rather than from R

Thanks, Here's the error, for example: > install.packages("mgcv") Installing package into 'C:/Users/pl39/Documents/R/win-library/3.4' (as 'lib' is unspecified) trying URL 'https://mirrors.nics.utk.edu/cran/bin/windows/contrib/3.4/mgcv_1.8-23.zip' Content type 'application/zip' length 2775362 bytes (2.6 MB) downloaded 2.6 MB package 'mgcv'

A) Don't try to "move" packages from one library (=directory of installed packages) to another. B) Although R Open is very close to CRAN R, it has some differences that you REALLY NEED TO READ about at their website. Pay particular attention to the checkpoint feature in this case. Note that troubles installing it or with the MKL are probably off-topic here, though R language

Ok, thanks -- > sessionInfo() R version 3.4.4 (2018-03-15) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows >= 8 x64 (build 9200) Matrix products: default locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C [5] LC_TIME=English_United States.1252

Perhaps someone here will see something useful if you post the output of the following function calls: sessionInfo() .libPaths() file.info(.libPaths()) and the verbatim (copied) error (in context) that you are seeing. -- Sent from my phone. Please excuse my brevity. On March 26, 2018 6:27:10 PM PDT, Paul Lantos <paul.lantos at duke.edu> wrote: >Thanks Jeff, > >So I initially

Do you have other instances of R open at the time you are doing this? Did you already have mgcv installed in your personal library when you tried installing it again? There is clearly something preventing you from writing to your library, or at least to specific packages in your library. On Tue, 27 Mar 2018, Paul Lantos wrote: > Thanks, > > Here's the error, for example: >

I deleted my library, reinstalled R, and had the same issue -- couldn't install anything into its newly created library. -----Original Message----- From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] Sent: Tuesday, March 27, 2018 2:26 PM To: Paul Lantos <paul.lantos at duke.edu> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Do you

Thanks, Kevin. I have done that but no luck. Paul -----Original Message----- From: Kevin E. Thorpe [mailto:kevin.thorpe at utoronto.ca] Sent: Tuesday, March 27, 2018 2:15 PM To: Paul Lantos <paul.lantos at duke.edu>; Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Cc: r-help at r-project.org Subject: Re: [R] unable to move temporary installation of package I have seen that error from

Nothing jumps out at me yet. 1) You missed including the text of your command (presumably install.packages) along with the actual text of the error. 2) What is the output of: getOption("repos") 3) You might also consider looking at system2( "cacls.exe", .libPaths()[1] ) though we may not be able to interpret the output appropriately in this venue if you are working on a

I have seen that error from students trying to install, usually from the Rcpp package. One suggestion I received was to try disabling your virus scanner while doing the install. The reason being that the scanner has not completed its job by the time the installer wants to move stuff around. Kevin On 03/27/2018 01:14 PM, Paul Lantos wrote: > Thanks, > > Here's the error, for

Have you investigated the issue Kevin Thorpe suggested? -- Sent from my phone. Please excuse my brevity. On March 27, 2018 2:31:31 PM PDT, Paul Lantos <paul.lantos at duke.edu> wrote: >I deleted my library, reinstalled R, and had the same issue -- couldn't >install anything into its newly created library. > >-----Original Message----- >From: Jeff Newmiller

I think MalwareBytes may have been the culprit. I disabled it and it's working now (even with my regular antivirus running). Thanks all for the advice! Paul -----Original Message----- From: Paul Lantos Sent: Tuesday, March 27, 2018 8:35 PM To: Kevin E. Thorpe <kevin.thorpe at utoronto.ca>; Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Cc: r-help at r-project.org Subject: RE: [R]

I don't believe I've gotten a reply from a Kevin Thorpe. -------- Original message -------- From: Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Date: 3/27/18 5:57 PM (GMT-05:00) To: Paul Lantos <paul.lantos at duke.edu> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Have you investigated the issue Kevin Thorpe suggested? -- Sent

I am running the aov function to determine the linear relationship between individual genes and a number of covariates in a micro-array data set. My aov function is working, but I have not been able to write a code to save these results in a matrix. I am using the following code or a slight variation of this code: for(i in 1(length(m[1,])-20) {tmp<- aov(m[,i]~treat, data=m)

Subject pretty much says it all. I currently have options()$browser set to open help pages in Mozilla Firebird, but it starts a new window each time and I would like a new 'tab' in an existing window. Sorry if this is obvious, but I can't find anything. Kevin Wright

I want R to read my Microsoft Access database or maybe even a Sybase database. I installed RODBC or at least thought I did. Then I issued the following command: library(RODBC) And got Error in lazyLoadDBfetch(key, datafile, compressed, envhook) : ReadItem: unknown type 241 In addition: Warning message: package 'RODBC' was built under R version 2.3.0 Error: package/namespace

I would really appreciate it if anyone could determine what is going on with the following command. It is only half-working and is losing lots of data. For the life of me I cannot even see the pattern of what it is losing and what it is not. I am attaching the R data set which you can use with the Load Workspace menu function.

How does one create a vector whose contents is the list of variables in a dataframe pertaining to a particular pattern? This is so simple but I cannot find a straightforward answer. I want to be able to pass the contents of that list to a "for" loop. So let us assume that one has a dataframe whose name is Data. And let us assume one had the height of a group of people measured at

Somehow, I've managed to have my .Rdata files become `disassociated' from the R program. I am running Windows XP Pro. I have re-installed R 2.4 in an attempt to have it re-associate itself with .Rdata files, but to no avail. .Rdata files are now associated with a file compression program or alternatively with Rgui.exe. .Rdata files are represented by the blue R, but double-clicking on

Hello there. Happy new year for everyone! I need help with a table. This table contains 300 rows and 192 columns. Being the first column the ID of my samples that can have several observations. I need to generate e NEW table that contains a single ID with the sum of the observations by columns: For example: Example ID?? A??? B? ? C? ? D? ? E? ? F? ? G.... 191 columns a1?? 0??? 0??? 0? ? 1???