similar to: Help with apply and new column?

Thanks. I think nabble is good for programming questions. Bear with me if I'm incorrect. Data: Genomics SNP information Goal: I need to add Chromosome and SNP position to the data frame I'm using through apply. I'd like to add new column from text processed through apply function. For example: 10:60523:T:G (Column 2) CHR: 10 Position: 60523 Dataset: chr rs ps n_miss allele1

Read the Posting Guide... (see message footer) ... some relevant things you can find there: a) Yes, this appears to be about how to use an R base function so it is on topic b) Post a reproducible example (include some sample data, preferably using the dput function) c) Post using plain text so the mailing list doesn't convert it for you and mangle things in a way you did not intend. -- Sent

Comments interspersed, and some code at the end. On Mon, 5 Mar 2018, Sariya, Sanjeev wrote: > Thanks. I think nabble is good for programming questions. Bear with me > if I'm incorrect. You may have found R-help archives at Nabble, but R-help has nothing to do with Nabble. > > Data: Genomics SNP information I know almost nothing about using R for genomics. > Goal: I need

Thanks for your reply. I searched for the error on Google before resorting to the R forum (help group). I tried Sys.env(...) too, but didn't resolve the error I get. Hence I am looking for solution. -- -----Original Message----- From: Thierry Onkelinx [mailto:thierry.onkelinx at inbo.be] Sent: Thursday, February 01, 2018 10:57 AM To: Sariya, Sanjeev <ss5505 at cumc.columbia.edu>

This is not an R issue so this is not a good venue... it has to do with which support software you have (not) installed. Try the R-sig-debian mailing list. Please clarify to them how you installed R... for Debian there are relevant deb packages and a corresponding Debian repository that provide the simplest route to a working system, but if you compile it yourself it is easy to miss dependencies.

Thanks for pointing to FAQ: I tried with cairo (shared in commands), unfortunately didn't work. -- Sanjeev Sariya -----Original Message----- From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] Sent: Thursday, February 01, 2018 10:12 AM To: r-help at r-project.org; Sariya, Sanjeev <ss5505 at cumc.columbia.edu>; r-help at r-project.org Subject: Re: [R] Error while working with

Dear Sanjeev, It seems that you system neither supports X11 devices nor cairo devices. See http://lmgtfy.com/?q=R+unable+to+open+connection+to+X11 for possible solutions. Best regards, ir. Thierry Onkelinx Statisticus / Statistician Vlaamse Overheid / Government of Flanders INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND FOREST Team Biometrie & Kwaliteitszorg /

I'm working on linux server: Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 GNU/Linux I get error while creating png files. I'm sharing my commands and error while I run those commands: >png("abc", type="cairo") Error in .External2(C_X11, paste0("png::", filename), g$width, g$height, : unable to start device PNG In addition: Warning

FAQ 7.19? Also, read the Posting Guide, in particular about posting using plain text. -- Sent from my phone. Please excuse my brevity. On February 1, 2018 6:50:42 AM PST, "Sariya, Sanjeev" <ss5505 at cumc.columbia.edu> wrote: >I'm working on linux server: >Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 >GNU/Linux > >I get error while creating

Hello R experts: I need a developer version of a Bioconductor library. > sessionInfo() R version 3.4.2 (2017-09-28) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 When I try to useDevel it fails. I've removed packages and again loaded but I get the same error message. remove.packages("BiocInstaller")

I've data that look like: Outcome V1_AA V1_EU V1_NA V2_AA V2_EU V2_NA 0 0.046 1.001 0.954 0.045 1.001 0.954 0 0.007 1 0.993 0.007 1 0.993 1 1.774 0.217 0.009 1.774 0.217 0.009 1 0.004 1.996 0 0.004 1.996 0 1

I've been receiving nasty e-mails too. No g-mail, but official/work e-mail address. -----Original Message----- From: R-help <r-help-bounces at r-project.org> On Behalf Of Rui Barradas Sent: Tuesday, April 17, 2018 5:09 PM To: Ding, Yuan Chun <ycding at coh.org>; Fowler, Mark <Mark.Fowler at dfo-mpo.gc.ca>; Luis Puerto <luiss.puerto at gmail.com>; Peter Langfelder

What does capabilities() return? For example, I get > capabilities() jpeg png tiff tcltk X11 TRUE TRUE TRUE TRUE TRUE aqua http/ftp sockets libxml fifo TRUE TRUE TRUE TRUE TRUE cledit iconv NLS profmem cairo FALSE

Hi, I was trying to download the Crossbow ISO from : http://opensolaris.org/os/project/crossbow/snapshots/ under "Crossbow Beta iso images June 6 2008" and it failed. Does anyone know of a link which is working ? Thanks for any pointers ! Regards, Sanjeev.

Hi, I''m a bit confused with the priority of different classes with HTB. How it will be? Will the class with lowest no: have maximum priority? Any help is most appreciated, Thanks in advance, Sanjeev -- ______________________________________________ Check out the latest SMS services @ http://www.linuxmail.org This allows you to send and receive SMS through your mailbox. Powered by

Hi , I''m trying to call the tc_qdisc_modify function of tc in iproute2/tc. I could compile it with my stub program and got the executable. However, when i try to create an htb qdisc i get the following error : Unknown qdisc "htb", hence option "default" is unparsable However, if i use the tc tool, it works fine.. When I tried to understand the problem, it appeared to

Hi, I would like to know how to specify the token rate when a tbf qdic is created using tc tool.. Will it be a default value when tbf qdisc is created? This could be a silly question.... im quite new to all these stuff.. but im really interested.. any help will be most appreciated... thanks in advance, sanjeev -- ______________________________________________ Check out the latest SMS

Hola, I am trying to isolate the memory leak I suspect in a mailman installation ? I found: http://blogs.sun.com/sanjeevb/date/200506 It gives an error: god at irt-smtp-02:~ 9:21am 65 # ./memleak.d 10312 dtrace: failed to compile script ./memleak.d: line 3: probe description pid10312:libc.so.1:malloc:entry does not match any probes I am on SunOS 5.10 Generic_127112-07 i86pc i386 i86pc Are

Hello all, First off, i''m talking about a SXDE build 89. Sorry if that was discussed here before, but i did not find anything related on the archives, and i think is a "weird" issue... If i try to remove a specific file, i got: # rm file1 rm: file1: No such file or directory # rm -rf dir2 rm: Unable to remove directory dir2: Directory not empty Take a look: ------- cut

Hello WINE friends, I am a WINE newbie seeking your help with WMI installation So far I have done the following - 1. installed wine-1.1.43 on SUSE 11.2 2. replaced wine's winsxs with my system's [XP] winsxs 3. replaced system32/ dlls except the ntdll, kernel32, user32 & gdi32 dlls with my system's After this, when I try installing WMI (as stated below), I get into access