similar to: libPaths displays truncated path?

> On Nov 23, 2017, at 4:34 AM, Loris Bennett <loris.bennett at fu-berlin.de> wrote: > > Hi, > > TL;DR > ----- > > I define the path > > /cm/shared/apps/R/site-library/3.4.2 > > and add it to libPath. Why does libPath then display it as > > /cm/shared/apps/R/site-library/3.4 Generally one only has a different library for each major

> On Nov 23, 2017, at 4:34 AM, Loris Bennett <loris.bennett at fu-berlin.de> wrote: > > Hi, > > TL;DR > ----- > > I define the path > > /cm/shared/apps/R/site-library/3.4.2 > > and add it to libPath. Why does libPath then display it as > > /cm/shared/apps/R/site-library/3.4 > > ? > Because it is a symbolic link.

Hi, When I install a package as a non-root user, it gets saved in a path such as ~/R/x86_64-unknown-linux-gnu-library/3.4 for any R version 3.4.x. Thus, if I want to install the packages somewhere else, as root say, I might do install.packages("somepackage","/some/where/else/R/site-library/3.4") In this case I would then want to construct the appropriate path in, say,

> .expand_R_libs_env_var("poof/%p/%v") [1] "poof/x86_64-w64-mingw32/3.4" Bill Dunlap TIBCO Software wdunlap tibco.com On Fri, Jan 12, 2018 at 4:49 AM, Loris Bennett <loris.bennett at fu-berlin.de> wrote: > Hi, > > When I install a package as a non-root user, it gets saved in a path > such as > > ~/R/x86_64-unknown-linux-gnu-library/3.4 >

peter dalgaard <pdalgd at gmail.com> writes: [snip (40 lines)] >> I don't quite understand the point about cause and effect. If >> normalizePath changes the symbolic link from >> >> /cm/shared/apps/R/site-library/3.4.2 >> >> to the actual directory >> >> /cm/shared/apps/R/site-library/3.4 >> >> in libPaths, why does R

Loris, thank you thank you so much!!! do you know which CRAN mirror i select? There are loads - all related to various countries.. so appreciate the help Jenny Jenny Coetzee (PhD Candidate) Head of Prevention in Key Populations & Head of the Soweto Sex Worker Project Perinatal HIV Research Unit (PHRU) New Nurses Home Chris Hani Baragwanath Academic Hospital Soweto B: +27 11 989 9821 M:

Hi Jenny, Jenny Coetzee <coetzeeJ at phru.co.za> writes: > Hello > > I am new to R, and am running a programme called RDS Analyst which > uses R. When trying to open RDS i am getting the following message: > JGR not installed. Attempting to install from CRAN? > > I am not sure if the issue is a Java one or an R one? > > I am working off a Mac using High Sierra

Hi Jenny, Jenny Coetzee <coetzeeJ at phru.co.za> writes: > Loris, thank you thank you so much!!! > > do you know which CRAN mirror i select? There are loads - all related to various countries.. > > so appreciate the help It shouldn't really matter, although I'd choose one that is geographically close. Occasionally there can be problems with HTTP vs. HTTPS, which

Hi Lily, lily li <chocold12 at gmail.com> writes: > Hi R users, > > Could you help me to see this problem? I could now load "rgdal" even though > I downloaded the compressed folder. Thanks for your help. > > Loading required package: sp > Error in dyn.load(file, DLLpath = DLLpath, ...) : > unable to load shared object >

Hello, I'm having some trouble trying to set the .libPaths() on Windows 7, R-2.15.0 and R-2.15.1. The environment variables R_LIBS and R_LIBS_USER are set according to the help page for .libPaths() and the Rprofile.site file has the default setting, as shown below. R-2.14.1 recognizes the lib paths but not R-2.15. Is this a bug or am I doing something wrong? (I've also tried with

Hi, I am running R 3.3.3 and getting the following error: Error in add_edges(res, edges = t(as.matrix(el[, 1:2])), attr = weight) : long vectors not supported yet: ../../src/include/Rinlinedfuns.h:138 when passing a 13 GB TransitionLayer object to shortestPath from the package 'gdistance'. The error, albeit in a different context, is discussed here:

Hi, I have a list of dates like this: date 2009-12-03 2009-12-11 2009-10-07 2010-01-25 2010-01-05 2009-09-09 2010-01-19 2010-01-25 2009-02-05 2010-01-25 2010-01-27 2010-01-27 ... and am creating a histogram like this t <- read.table("test.dat",header=TRUE) hist(as.Date(t$date), "years", format = "%d/%m/%y", freq=TRUE)

Dear r-bugs, With AIX 5.3 and OBJECT_MODE=64 CC="xlc -q64" CXX="g++ -maix64" and ./configure --without-iconv --enable-R-shlib the following warning occurs: configure: WARNING: tiffio.h: present but cannot be compiled configure: WARNING: tiffio.h: check for missing prerequisite headers?

thanks Loris you are bering so helpful! So, i have done what you explained, but the RDS package that runs ?using or through? R is now just closing each time i open it. I have googled and seen that i need to to the following: Tips: The recent updates to the Apple Mac OS (Sierra and High Sierra) have reorganized the ways apps, like RDS Analyst, work. So sometimes RDS Analyst will not be

Hi, I am getting the following error # (R-2.9.1/src/library/methods): gmake front /bin/sh: 0403-057 Syntax error at line 1 : `;' is not expected. gmake: *** [front] Error 2 However, I am not sure what script sh is trying to execute at this point. I am building on AIX 5.3. Cheers, Loris -- Dr. Loris Bennett Computer Centre Freie Universit?t Berlin Berlin, Germany

This looks to me like a package development issue... which may be under discussion in R-sig-geo (search the archives), but more likely to be appropriate to discuss with the maintainer by email or through their development repository (R-forge, though it looks unused). -- Sent from my phone. Please excuse my brevity. On February 14, 2018 7:43:51 AM PST, Loris Bennett <loris.bennett at

Hi, Calling gdistance::shortestPath gives me the error Error in asMethod(object) : not a symmetric matrix; consider forceSymmetric() or symmpart() The output of dput(.traceback()) is pairlist("stop(\"not a symmetric matrix; consider forceSymmetric() or symmpart()\")", "asMethod(object)", "as(Laplacian,\"symmetricMatrix\")",

Hello I am new to R, and am running a programme called RDS Analyst which uses R. When trying to open RDS i am getting the following message: JGR not installed. Attempting to install from CRAN? I am not sure if the issue is a Java one or an R one? I am working off a Mac using High Sierra Any help please..? thanks Jen Jenny Coetzee (PhD Candidate) Head of Prevention in Key Populations

Hi Jeff, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> writes: >> Hi, >> >> I am running R 3.3.3 and getting the following error: >> >> Error in add_edges(res, edges = t(as.matrix(el[, 1:2])), attr = weight) >> : >> long vectors not supported yet: ../../src/include/Rinlinedfuns.h:138 >> >> when passing a 13 GB TransitionLayer

Hi, I am trying to install R 2.9.0 on AIX 5.3. During the 'make' run I get the following error: Error: Invalid DESCRIPTION file Invalid Priority field. Packages with priorities 'base' or 'recommended' or 'defunct-base' must already be known to R. See the information on DESCRIPTION files in section 'Creating R packages' of the