similar to: Problem with shortestPath in igraph and qgraph

Hard to follow data analysis without data. Try making your example reproducible [1][2][3] and post in plain text (a setting in your emailer). Read the Posting Guide mentioned in the footer to avoid other posting pitfalls. [1] http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example [2] http://adv-r.had.co.nz/Reproducibility.html [3]

We aim to visualize a 17*17 correlation matrix with the package *qgraph*, consisting of 16 variables. Without variable names in the input file, that works perfectly R> qgraph(data) but we'd like variable names instead of numbers for variables. In a correlation matrix, the first row and the first column usually have variable names. We've been unsuccessful so far to read such a file

hello, i want to use igraph for drawing graph of my data. First time i try do it and it was successful. but now i want to test again i got this error: "edges must be numeric or character". this is my edge list(this is output from R): From To 1 US20100331312 2 US20100331341 3 US20100330919 US20100041339 4 US20100330919 US20100195590 5 US20100330919

Hi, Calling gdistance::shortestPath gives me the error Error in asMethod(object) : not a symmetric matrix; consider forceSymmetric() or symmpart() The output of dput(.traceback()) is pairlist("stop(\"not a symmetric matrix; consider forceSymmetric() or symmpart()\")", "asMethod(object)", "as(Laplacian,\"symmetricMatrix\")",

Dear R users, I use R 2.4.0 on an iMac running Mac OS X 10.4.8, with a 2.16GHz Intel Core 2 Duo and 2GB 667 MHz DDR2 SDRAM. > sessionInfo() R version 2.4.0 (2006-10-03) i386-apple-darwin8.8.1 locale: es_ES.UTF-8/es_ES.UTF-8/es_ES.UTF-8/C/es_ES.UTF-8/es_ES.UTF-8 attached base packages: [1] "methods" "stats" "graphics" "grDevices"

I want to perform linear regression on groups of consecutive rows--say 5 to 10 such--of two matrices. There are many such potential groups because the matrices have thousands of rows. The matrices are both of the form: > shp[1:5,16:20] SL495B SL004C SL005C SL005A SL017A -2649 1.06 0.56 NA NA NA -2648 0.97 0.57 NA NA NA -2647 0.46 0.30 NA NA

I am having difficulty loading a points shapefile (1600 records) I generated from ArcGIS as a PointsSpatialDataFrame using the maptools readShapePoints function. library(maptools) surveypts <- readShapePoints(system.file("C:/temp/survey.shp", package="maptools")[1] Error in getinfo.shape(filen) : Error opening SHP file I've tried numerous re-exports and renames of the

On Jan 29, 2013, at 12:51 AM, Tobias Grosser <tobias at grosser.es> wrote: > > # ignore assumed dependences. > for (i = 0; i < 4; i++) { > tmp1 = A[3i+1]; > tmp2 = A[3i+2]; > tmp3 = tmp1 + tmp2; > A[3i] = tmp3; > } > > Now I apply for whatever reason a partial reg2mem transformation. > > float tmp3[1]; > > # ignore assumed

Hola a todos. Estoy utilizando R , más concretamente los paquetes maptools y sp, para realizar mapas de España por comunidades y provincias y de Andalucía por provincias y municipios. El caso es que para el mapa de municipios en Andalucía, una vez leído el fichero shp con readShapePoly , si luego por ejemplo , quiero poner todos los polígonos de un color utilizando library(maps)

Hello, I'm having problems reading a shapefile with read.shape (maptools). I'm absolutely sure my file is there, but I get "no such file". The wd is ok, since read.table for example does find the file. > getwd() [1] "D:/somedirectory/R scripts" > read.table("cities.shp") Error in read.table("cities.shp") : empty beginning of file In addition:

When I was trying to run mutiple E1s over TDMoE, the zaptel would drivers complain about too little memory, whenever I added more than 31 channels. Requesting 62 channels in a dynamic span gave me ... span creation failed: Cannot allocate memory upon loading the zaptel drivers. How would you go about running, 8 or 16 say, E1s over TDMoE? Would you create multiple dynamic spans or just one large

Hello, I noticed a strange thing when attempting to upgrade a specific package (lavaan) from c2d4u and wondered if someone could confirm the problem. In short, apt seems to think that an older version from the "universe" repo is higher than the newer version from c2d4u. When I do apt-cache showpkg r-cran-lavaan I get the output at the bottom of this email. Then, I tried to force

Hi, I am new to R and am a very basic user. I'm importing SHP files, adding plots of random locations within my polygon (these files have GPS data), and then want to save these plots (intact with added points) as KML files to look at in GoogleEarth (or possibly as SHP files which I can then convert into KML). This is as far as I've gotten (code below) and am lost as to next steps, Any

Hi R-users, I'm quite new to R and trying to learn the basics. I have a following problem concerning the convertion of array object into data frame. I have made following data sets tmp1 <- rnorm(100) tmp2 <- gl(10,2,length=100) tmp3 <- as.data.frame(cbind(tmp1,tmp2)) tmp3.sum <- tapply(tmp3$tmp1,tmp3$tmp2,sum) tmp3.sum <- as.data.frame(tapply(tmp1,tmp2,sum)) and I want the

Greetings! I am trying plot some data on a map in R. Here's the scenario. I have a variable called probworkinghealthy which contains a predicted probability of employment for every individual in my sample (about 100,000 observations). I have another variable, called a001ter, which contains the subject of residency in the Russian Federation (akin to a US state) for every individual in the

On 01/29/2013 07:58 PM, Nadav Rotem wrote: > > On Jan 29, 2013, at 12:51 AM, Tobias Grosser <tobias at grosser.es > <mailto:tobias at grosser.es>> wrote: > >> >> # ignore assumed dependences. >> for (i = 0; i < 4; i++) { >> tmp1 = A[3i+1]; >> tmp2 = A[3i+2]; >> tmp3 = tmp1 + tmp2; >> A[3i] = tmp3; >> } >>

Dear list, I have found a thread dealing with similar problems with a Mac, but somehow I cannot get it to work and the problem is slightly different: I am using the shell() command to execute a program from within R. The problem is that I need to execute SDKShell.bat file first that sets the environment variables for the program ogr2ogr.exe: shell(cmd =

Dear all, I've been puzzled why I not able to load a shapefile from a connection. Does anyone here can give a reasonable answer? When I try the following script I got this error: Error in getinfo.shape(fn) : Error opening SHP file #Reproduction temp <- tempfile() download.file("http://metodologiapolitica.com/download/Brasil.zip",temp) shp.br <- readShapePoly(unzip(temp,

Consider the following C code: typedef __attribute__(( ext_vector_type(2) )) float float2; typedef __attribute__(( ext_vector_type(2) )) __attribute__(( aligned(4) )) float float2_align2; void foo(void) { const float * p; size_t offset; float2 tmp = *((float2_align2 *)(p+offset)); } When compiled with clang ‹emit-llvm I get: define void @foo() { entry: %p = alloca float*, align 4

Dear R experts, I am new to the list and R software. I need to convert arcview file to Winbugs having R has middle package. Got from friends that it is possible following the steps: 1. Converting arcview shapefile to "cgm clear text file" 2. Downloading "convert.r" to into R 2.1 use source("convert.r") 2.2 convert("filename_cgm") without the