similar to: About error bars on barplots

On 18/06/17 12:10, lily li wrote: > Hi R users, > > I have a question about adding uncertainty bars to stacked bar plots. > > DF: > year A B C Amin Amax Bmin Bmax Cmin Cmax > 2009 40 45 15 30 61 23 56 14 17 > 2010 36 41 23 26 54 22 51 22 24 > > I use the code below: > >

> > Hi, > > I used > GDALinfo("MOD13Q1.A2001049.h13v11.005.2007002215512.250m_16_days_EVI.tif") and > got the results: > > rows 10 > columns 11 > bands 1 > origin.x 150701.4 > origin.y 7744897 > res.x 250 > res.y 250 > ysign -1 > oblique.x 0 > oblique.y 0 > driver GTiff >

Hello, I am trying to do a nonlinear model using the "nls" command in R software. The data I am using is as follows: A<-c(7.132000,8.668667,9.880667,8.168000,10.863333,10.381333,11.059333,7.589333,4.716667,4.268667,7.265333,10.309333,8.456667,13.359333,8.624000,13.571333,12.523333,4.084667 ,NaN,NaN)

Hello. I have a script in which I repeatedly fit a nonlinear regression to a series of data sets using nls and the port algorithm from within a loop. The general structure of the loop is: for(i in 1:n){ … extract relevant vectors of dependent and independent variables … … estimate starting values for Amax and Q.LCP…

I'm sorry but that is not a working example. A working example needs to create the plots being used. For example, stealing some code from https://rpkgs.datanovia.com/ggpubr/reference/ggarrange.html #================================================================= data <https://rdrr.io/r/utils/data.html>("ToothGrowth")df <- ToothGrowthdf$dose <- as.factor

Dear John Kane Dear R community Here my working example 1. Example that is working with legend=?top?. However, as mentioned, the legend is in the middle of the top axis. mylist<-list(p1, p2) dev.new(width=28, height=18) fig1<- ggarrange(plotlist=mylist, common.legend = TRUE, legend="top", labels = c("(A)", "(B)"), font.label = list(size = 18, color =

Hello everyone! I have a data frame of 136 variables with 270 observations. I would like to create a new data frame such that each element of that data frame contains the maximum value of the 6 prior lags of the initial data frame. So for example, if my original data frame, A, were A1=c(7.72, 7.94, 7.56, 7.54, 0.93, 0.59, 7.21, 8.00, 7.19, 7.57)A2=c(4.27, 3.70, 3.80, 3.67, 3.83, 3.95, 4.02, 2.06,

Hi all, I have been looking for means of add a contour around some points in a scatterplot as a means of representing the center of density for of the data. I'm imagining something like a 95% confidence estimate drawn around the data. So far I have found some code for drawing polygons around the data. These look nice, but in some cases the polygons are strongly influenced by outlying points.

I have tried multiple different methods to figure out how to get a date axis of my preference (start date of each month). Any assistance would be appreciated. The below section is not producing a date axis: plot(totaldays$totaldays,totaldays$y,type="n",ylim=c(0,Emax),xaxt="n") *xlabels<-(strptime(totaldays$totaldays,"%Y-%m-%d",tz=""))

Hi Folks, I'm surprised, but I didn't find this question addressed anywhere. I'd like to generate a LaTeX caption with R code. I've tried the code below, but I get the following TeX error: ! Argument of \@caption has an extra }. <inserted text> \par l.21 } Any thoughts? Perhaps I'll have to write the "\caption{}" text with R? thanks!

Hi there, I am trying to plot some output from a FORTRAN (ifort) program using R (2.5.1) under batch mode. In the FORTRAN code, I call R in batch mode to execute a script called fig1.R using something like PROGRAM test USE IFPORT IMPLICIT NONE DO !Some function which makes an output file called ~/fortran_output.txt CALL myfunc() !System call to R plotting routine CALL SYSTEM

Hi R users, I have some sets of variables and put them into one dataframe, like in the following. How to choose a specific set of pareto front, such as 10 from the current datasets (which contains more than 100 sets)? And how to show the 10 points on one figure with different colors? I can put all the points on one figure though, and have the code below. I drew two ggplots to show their

I am having problem making ggplot2, tikzDevice, and knitr working together. I used a very simple example: ---------------------------example.Rnw----------------------------- \documentclass[preview]{standalone} \begin{document} \begin{figure} <<fig1,eval=TRUE,echo=FALSE,dev='tikz'>>= library(ggplot2) qplot(displ, hwy, data = mpg, colour = factor(cyl)) @ \end{figure}

Dear all, The following commands results in a blank graph file, postscript(file = "C:/Temp/Fig1.eps", height=4.0, width=4.0, horizontal = FALSE, onefile = FALSE, paper = "special") x11(height=3,width=3) par(mar=.1+c(4.5,4.5,0,0)) x <- c(10,20,30) y <- c(5, 7, 9) plot (x,y) dev.off() The codes function normally without any error in the command window. However, the

HI lily, for the colouring of individual points you can set the colour aesthetic. The ID is numeric so ggplot applies a colour scale. If we cast ID to a factor we get the appropriate colouring. test_df <- data.frame(ID = 1:20, v1 = rnorm(20), v2 = rnorm(20), v3 = rnorm(20)) ggplot(data=test_df, aes(x=v1,y=v2, colour = as.factor(ID))) + geom_point()+ theme_bw()+ xlab('Variable 1')+

Hello. I am using the nonlinear least squares function (nls). The function that I am trying to fit seems to be very sensitive to the starting values and, if these are not chosen properly, the nls function stops and gives an error message: Error in numericDeriv(form[[3]], names(ind), env) : Missing value or an Infinity produced when evaluating the model In addition: Warning

Dear R helpers, I think that this may be a bit of a math question as the more I consider it, the harder it seems. I am trying to come up with a way to work out the minimum distance between line segments. For instance, consider 20 random line segments: x1 <- runif(20) y1 <- runif(20) x2 <- runif(20) y2 <- runif(20) plot(x1, y1, type = "n") segments(x1, y1, x2, y2)

Hi everyone, I'm using R, Latex and Sweave for some years now, but today it confuses me alot: Running Sweave produces only figures in .pdf format, no .eps figures. The header looks like this: <<echo=TRUE, fig=TRUE, label=Fig1>>= There was no error message. Does anybody have an idea? Any changes in the Sweave-package? Or a missing driver or something like that? I recently

hello R-users, I'd like to plot four graphics on the same page but with different sizes. I've tried to use : par(fig=c(0,0.5,0,0.6)) plot(fig1) par(fig=c(0.5,1,0,0.6)) plot(fig2) etc... but when a figure is plotted, it erase the previous. I've tried to pass 'new=T' to plot function but it's not possible. What can I do ? is it a bug ? I've already reported this a 2 or

I've spent several days compiling the following code (I apologize in advance - this code is very inelegant, and I'm sure could be written much more efficiently, but I've stuck with whatever method I could get to work - sometimes the more efficient code I just couldn't get to work without an error, because of my R inexperience). My main motivation for writing the code is that