similar to: point size

You could add size = log10_P to the aes() inside geom_point(). Untested code below. See also http://ggplot2.tidyverse.org/reference/geom_point.html ggplot(mydata, aes(x = X, y = log10_P)) + theme_bw() + theme(panel.border=element_blank(), legend.position="top", axis.text=element_text(size = 8)) + geom_point(aes(color = Traits, size = log10_P)) Jean On Fri, Jun 16, 2017 at

Hi Petr and Richard; Thanks for your responses and supports. I just faced a different problem. I have the following R codes and work well. p <- ggplot(a, aes(x=Phenotypes, y=Metabolites, size=abs(Beta), colour=factor(sign(Beta)))) + theme(axis.text=element_text(size = 5)) p1<-p+geom_point() p2<-p1+theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(),

Hi scale_colour_gradient(?red?, ?blue?) should do the trick. Actually I found it by Google ggplot colour http://www.cookbook-r.com/Graphs/Colors_(ggplot2)/ http://www.sthda.com/english/wiki/ggplot2-colors-how-to-change-colors-automatically-and-manually#gradient-colors-for-scatter-plots question. So you could find it too and probably far more quickly then myself as I have also other duties. Cheers

Petr, there was a thinko in your response. tmp <- data.frame(m=factor(letters[1:4]), n=1:4) tmp tmp$m <- factor(tmp$m, levels=c("c","b","a","d")) ## right tmp[order(tmp$m),] tmp <- data.frame(m=factor(letters[1:4]), n=1:4) levels(tmp$m) <- c("c","b","a","d") ## wrong tmp[order(tmp$m),] changing levels

Hi After melt you can change levels of your factor variable. Again with the toy example. > levels(temp$variable) [1] "y1" "y2" "y3" "y4" > levels(temp$variable) <- levels(temp$variable)[c(2,4,1,3)] > levels(temp$variable) [1] "y2" "y4" "y1" "y3" > And you will get graphs with this new levels ordering.

I have following codes for ggplots. The legends are given in the plot do not match with the values specified in the codes given below. Your helps highly appreciated. Greg library(ggplot2) p <- ggplot(a,aes(x=NO_BMI_FI_beta ,y=FI_beta ,color= Super.Pathway))+ theme_bw() +theme(panel.border=element_blank()) + geom_point(size=3) p2<-p+scale_color_manual(name="Super.Pathway",

Dear R users, I need to produce rainfall maps using R. I know that this is possible, I looked though the web, I found the example below reported (the author is Andrew Tredennick). I would ask you if this is the most performing way to make rainfall maps; if yes would someone be able to give me an example of how file.asc and pointfile.csv should be? If no would somebody please show me another way

Hi, You might get more help from the R-sig-geo list, which is devoted to spatial topics. However. The *.asc file is an ArcGIS raster export format. You should use whatever the appropriate import commands are for your own gridded rainfall data. If you have a different format, you might or might not be able to import it directly with raster. ?raster will tell you more about the kinds of formats

Hi, Dummy data script and scripts are attached below. I would like to change the plot to look like this:

I have code like this: data <- read.csv("test1.csv", stringsAsFactors=FALSE, header=TRUE) # Graph myplot=ggplot(data, aes(fill=condition, y=value, x=condition)) + geom_bar(position="dodge", stat="identity", width=0.5) + scale_fill_manual(values=c("#7b3294", "#c2a5cf", "#a6dba0", "#008837"))+

Fwiw the engine behind geom_raster needs explicit observation-per-row form for input (with no structural normalization), so conversion to points is perfectly proper here, albeit confusing in context. (It's closer to what graphics devices actually use ultimately, but the expansion is laid out very early in ggplot2 because there's no standard for intermediate forms.) Cheers, Mike On Wed,

Hi r-users, I would like to draw line plots. However, the plot starts from 11121 data and plot data ENTRY last in the plot. Here is the code and data. datn <- read.table(header=TRUE, text=' LEVEL STATUS CGPA DIPLOMA ENTRY 3.32 DIPLOMA 11121 2.91 DIPLOMA 11122 2.90 DIPLOMA 12131 2.89 DIPLOMA 12132 2.89 DIPLOMA 13141 2.93 DIPLOMA 13142 2.96 DIPLOMA 14151 2.76 DIPLOMA 14152 2.73 STPM

Hello, I am trying to add a less than equal to symbol in a ggplot2 legend text. See sample code below. I have tried using the expression function and \u2264. I also tried adding labels to legend.text under theme. Neither of these 3 options work. Please help, Mahesh ++++++++++++++ Extra.column=ifelse(data[,covariate]>cutpoint,1,0) Grp1 <- "\u2264 1.5" Grp2 <-

Hi everyone (again), before you all start screaming that the reordering of factors has been discusse on several threads and is not particular to ggplot2, hear me out. I can easily reorder my x-axis factor in facet.grid() in ggplot2. What I cannot reorder are the factors represented on the strips. I can see that the graphs are changing, so I am afraid of what it is I am doing. Why is ggplot2

Hi R Users, I tried to increase the legend height in ggplot2, but it did not respond at all using the follwoing code. Do you have any suggestions for me? dat<-data.frame(temperature) P1<-ggplot(dat, aes(X, Y)) Scenario1<-P1+geom_point(aes(colour = value), size = 1)+ theme_bw()+ theme(axis.text.x = element_blank(),axis.text.y = element_blank())

Hi, # For publications, I am not allowed to repeat the axes. I have tried to remove the axes using: # yaxt="n", but it did not work. I have not understood how to do this in ggplot2. Can you help me? # I also do not want loads of space between the graphs (see below script with Dummy Data). # If I could make it look like the examples on the (nice) examples page: #

Hi, Thanks for the reproducible example. Looking at str(datn) would give you a clue. STATUS is a factor because it contains character values. Factor levels by default are alphabetical with numbers first, but you can change those. > str(datn) 'data.frame': 36 obs. of 3 variables: $ LEVEL : Factor w/ 4 levels "DIPLOMA","MATRIC",..: 1 1 1 1 1 1 1 1 1 4 ... $

Hola a tod en s, bueno, un poco al hilo de un mensaje anterior, reformulo la pregunta y pongo código completamente reproducible, a ver si hay más suerte. Estoy con un informe y hay que hacer algunos gráficos con datos diferentes con ggplot2, y hay que poner el mismo tamaño para todos ellos. El problema es que R cambia automáticamente el tamaño del área de trazado y el margen en función de

Hi Maybe there are other ways but I would split data to several chunks e.g. in list and use for cycle to fill multipage pdf. With the toy data something like library(reshape2) library(ggplot2) temp <- melt(temp) temp.s<-split(temp, cut(1:nrow(temp), 2)) pdf("temp.pdf") for (i in 1: length(temp.s)) { p <- ggplot(temp.s[[i]], aes(x=par1, y=variable, size=abs(value),

Dear R users, I am working on a data-set with 3 species. They are apple, orange and banana. I want to annotate the facets only on the bottom panel. However, by default I am getting annotations on all the plots. I was able to get text annotation only on the desired plot. However, I am confused what I need to do for the arrows / segments. Here is my code: library(ggplot2) library(grid) tempobs