Displaying 11 results from an estimated 11 matches similar to: "Redundancy canonical analysis plot problem in 3D using VEGAN, RGL, SCATTERPLOT3D and SFSMISC"
2017 Jul 19
0
Redundancy canonical analysis plot problem in 3D using VEGAN, RGL, SCATTERPLOT3D and SFSMISC
We need to keep the discussion on the list. When I run your code, there are several problems.
strain.data <- read.xlsx("Dee rhiz.xlsx", sheetName ="strain", header = T, row.names = 1)
str(strain.data) # lists 9 columns at the end with all NAs
strain.data1 <- (strain.data, sqrt.dist = TRUE) # this is not a valid R line. I get
Error: unexpected ',' in
2005 Jun 23
1
the dimname of a table
i have a data frame(dat) which has many variables.and i use the following script to get the crosstable.
>danx2<-c("x1.1","x1.2","x1.3","x1.4","x1.5","x2","x4","x5","x6","x7","x8.1","x8.2","x8.3","x8.4","x11",
2009 Feb 08
0
library vegan - cca - versus CANOCO
Hi R users,
I have two data matrix, one with community data and another with
environmental data. Prior to preform the CCA, I have used PCA to select some
environmental variables and to avoid redundance information. The result is
that I have 4 environmental variables and my community data matrix where,
following bibliography, I have eliminated rare species.
All variables were log-transformed (x+1)
2008 Sep 03
2
Highlighint rjs problem on a new product
Hi,
Problem Summary:
I have been trying to add the highlight effect to my table but
everytime a new record is added the highlighting gives an rjs error.
However when i click the add to cart button on a product that already
exists inside the table, the highlight effect works. Is this because
the partial must only have only one <tr></tr> in it and the <table>
must be on the other
2012 Nov 09
1
CCA with Vegan - Plot problem
Hi,
I've just started using R and am having some problems with CCA using vegan.
I'm looking at abundance p/m2 (hence decimals) vs environmental variables
and have been using
http://ecology.msu.montana.edu/labdsv/R/labs/lab12/lab12.html to guide me
through.
My organism data looks like this:
Sample "Species_1" "Species_2" "Species_3" etc
Sample_1
2011 Oct 27
1
Redundancy canonical analysis plot problem in 3D using VEGAN, RGL, SCATTERPLOT3D and SFSMISC
Un texte encapsul? et encod? dans un jeu de caract?res inconnu a ?t? nettoy?...
Nom : non disponible
URL : <https://stat.ethz.ch/pipermail/r-help/attachments/20111027/aa73bd4c/attachment.pl>
2001 Oct 15
0
predict.fda difficulties
Dear Dr Hornik / R help list,
I am using the mda package and in particular the fda routine to classify a
set of 162 neurons falling in to 11 neuronal cell types according to 17
morphological variables. I would like to use a cross-validation approach in
which I split the data, train with one part amd then test the predictive
accuracy of the discriminant functions with the remaining part. However
2011 Sep 26
0
vegan cca: syntax
Dear all,
I am a new member to the list - and to the analysis that I am attempting.
I have the following case
A group of us have been monitoring (over a period of a few years) a number
of paired plots that were flooded and / or burnt.
The plots are located in two topographical settings, some were burnt, some
were flooded, some were burnt & flooded and some were not affected at all.
At
2011 Mar 10
1
vegan CCA I am Completely new to ordination analyses
Dear list,
I am trying to predict species volume from bioclimatic data, I have various
sites and I have a data frame with species volume and
the corresponding bioclimatic data for each site.
I read on a discussion forum that you can use ordination to predict species
abundance (in my case volume) from 'new' climate data for sites where you do
not know the abundance.
Unfortunately I
2010 Aug 20
0
awful i/o performance on xen paravirtualized guest
Hi. I'm testing a centos 5.4 xen PV guest on top of a centos 5.4 host.
for some reason, the disk performance from the guest is awful. when I do an
import , the io is fine for a while then climbs to 100% and stays there most of
the time.
at first I tougth it was because I was using file-backed disks, so deleted
those and changed to LVM, but the situation did't improve.
Here's an
2009 Jan 31
14
[PATCH 2/3] xen: make direct versions of irq_enable/disable/save/restore to common code
Now that x86-64 has directly accessible percpu variables, it can also
implement the direct versions of these operations, which operate on a
vcpu_info structure directly embedded in the percpu area.
In fact, the 64-bit versions are more or less identical, and so can be
shared. The only two differences are:
1. xen_restore_fl_direct takes its argument in eax on 32-bit, and rdi on 64-bit.