similar to: New package: nipals

Hello i need some precision about nipals in the chemometrics package in R . When i use nipals in chemometrics i obtain T and P matrix. I really don't understand what to do with these two matrix to obtain the scores for every the component (like in spss fo example) Comp1 Comp2 Comp3 quest1 0,8434 0,54333 0,3466 quest2 0,665 0,7655 0,433 Thank you very

The printing of the locale information from sessionInfo is not very tidy. Using toLatex(sessionInfo) pretty much guarantees "badness" from breaking the margin boundary (though my version of TeX no longer reports such errors). A random example is here: http://cran.r-project.org/web/packages/Matrix/vignettes/Design-issues.pdf I find the locale information unnecessary and right now I hack

Dear list members; The code given below corresponds to the PCA-NIPALS (principal component analysis) algorithm adapted from the nipals function in the package chemometrics. The reason for using NIPALS instead of SVD is the ability of this algorithm to handle missing values, but that's a different story. I've been trying to find a way to improve (if possible) the efficiency of the code,

I won't send to list, but just to the two of you, as I don't have anything to add at this time. However, I'm wondering if this approach is worth writing up, at least as a vignette or blog post. It does need a shorter example and some explanation of the "why" and some testing perhaps. If there's interest, I'll be happy to join in. And my own posting suggests how the

Hi all, I've been trying to figure out how to superimpose a histogram on a biplot that shows the relative contribution of each axis. I have been using the NIPALS function (http://biomserv.univ-lyon1.fr/~dray/ files/softwares/nipals.R) to run principal component analyses. Here is a toy example. source("http://biomserv.univ-lyon1.fr/~dray/files/softwares/nipals.R")

Thanks a lot! This was amazing. I'm not sure I see how the conditiion pK1 < pK2 < pK3 is enforced? - it comes from the derivation via generalized Henderson-Hasselbalch but perhaps it is not really necessary. Anyway, the use of Vectorize did the trick! Best wishes Troels Den 06-11-2023 kl. 19:19 skrev Ivan Krylov: > ? Mon, 6 Nov 2023 17:53:49 +0100 > Troels Ring <tring at

Dear all: I am comparing the PLS outputs of R and SAS for the following data set: Y x1 x2 x3 3 6 2 2 3 1 5 5 4 7 4 1 5 6 5 6 2 4 3 2 8 5 0 9 where Y is the dependent variable and x1, x2, x3 are the independent variables. I found several PLS algorithms in R (NIPALS,SIMPLS,KERNEL PLS). SAS has SIMPLS and NIPALS. The following are the NIPALS calculations of

? Mon, 6 Nov 2023 17:53:49 +0100 Troels Ring <tring at gvdnet.dk> ?????: > Hence I wonder if I could somehow have non linear regression to find > the 3 pK values. Below is HEPESFUNC which delivers charge in the > fluid for known pKs, HEPTOT and SID. Is it possible to have > root-finding in the formula with nls? Sure. Just reformulate the problem in terms of a function that

I've seen a number of problems like this over the years. The fact that the singular values of the Jacobian have a ration larger than the usual convergence tolerances can mean the codes stop well before the best fit. That is the "numerical analyst" view. David and Jeff have given geometric and statistical arguments. All views are useful, but it takes some time to sort them all out and

You wrote: Ø Dear All, Ø Can anyone provide me with reference notes(or steps) towards analysis of?? (un)balanced panel data in R. Ø Thank you! The "plm" package does panel data analysis in R. See the vignette at: cran.r-project.org/web/packages/plm/vignettes/plm.pdf. There are other similar articles by the same authors, Yves Croissant and Giovanni Millo, and one of these is the

Hi Version 0.7 of package tsDyn presented at useR! 2009 is now on CRAN, extended with several new features. The package tsDyn is aimed at estimating nonlinear time series models which exhibit regime specific properties. The regime switching dynamics can either be described by smooth transition (STAR and LSTAR) or threshold effects (SETAR). The package furthermore offers nonlinear models

Hi Version 0.7 of package tsDyn presented at useR! 2009 is now on CRAN, extended with several new features. The package tsDyn is aimed at estimating nonlinear time series models which exhibit regime specific properties. The regime switching dynamics can either be described by smooth transition (STAR and LSTAR) or threshold effects (SETAR). The package furthermore offers nonlinear models

Hi It is preferable to echo your posts to r-help, you usually get more answers and some definitelly superb to mine. It is also better to start a new mail if your question has nothing to do with original subject "Maura E Monville" <maura.monville at gmail.com> napsal dne 01.10.2007 17:44:43: > Unluckily I do not have the privilege of practising with R all day > long. I

I have a co-worker who has installed R 3.4.2 on Windows 7. When this person tries to load the rgl package with library(rgl) A dialog box appears with the message: R for windows gui frontend has stopped working I suspect a conflict problem with a dll, but I'm not sure how to identify if this is the problem since R is crashing immediately. Interestingly, when we start R and do NOT load rgl,

Thanks Kevin, this indeed clarifies a bit the S3 method registration universe. On 8 July 2015 at 15:48, Kevin Wright <kw.stat at gmail.com> wrote: > Not sure if this answers your question, but you can't unregister a method. See > > http://tolstoy.newcastle.edu.au/R/help/06/07/30791.html > > Kevin Wright > > > On Wed, Jul 8, 2015 at 5:09 AM, Renaud Gaujoux >

Dear R users, I've just uploaded 2 packages on CRAN, RTisean and tsDyn, both for time series analysis (joint research projects with members of the Statistics Department, University of Udine). Brief descriptions follow. RTisean is an R interface to TISEAN executables (http://www.mpipks-dresden.mpg.de/~tisean/). TISEAN is a suite of C and Fortran routines for nonlinear time series analysis,

Dear R users, I've just uploaded 2 packages on CRAN, RTisean and tsDyn, both for time series analysis (joint research projects with members of the Statistics Department, University of Udine). Brief descriptions follow. RTisean is an R interface to TISEAN executables (http://www.mpipks-dresden.mpg.de/~tisean/). TISEAN is a suite of C and Fortran routines for nonlinear time series analysis,

Creeping code complexity ... I like to think that the cuteR names will have a Darwinian disadvantage in the long run. FWIW Hadley Wickham argues (rightly, I think) against mixed-case names: http://r-pkgs.had.co.nz/package.html#naming. I too am guilty of picking mixed-case package names in the past. Extra credit if the package name and the standard function have different cases! e.g.

I've been using the pcaMethods to develop a scores matrix ======================================= data(iris) pcIr <- pca(iris[,1:4], method="nipals", nPcs=3, cv="q2") test <- scores(pcIr) ======================================== What I'm looking to do is to use lattice's barchart to plot the scores something like below, but expanded to all the scores

Hello everyone, I am looking into time series data compression at the moment. The idea is to fit a curve on a time series of n points so that the maximum deviation on any of the points is not greater than a given threshold. In other words, none of the values that the curve takes at the points where the time series is defined, should be "further away" than a certain threshold from the