similar to: lists and rownames

I have data I'd like to plot using the formula interface to boxplot. I call boxplot like so: with(mydata, boxplot(count ~ geno * tissue)) I get a boxplot with x axis labels like "wt.kidney". I would like to change the '.' to a newline. Where is this separator configured? Thanks, -Ed

Hello, I am currently using R to run an external program and then read the results the external program sends to the stdout which are tsv data. When R reads the results in it converts it to to a list of strings which I then have to maniuplate with a whole slew of commands (which, figuring out how to do was a reall challenge for a newbie like myself)--see below. Here's the code I'm

I don't really understand. I mean, I understand the solution is print(ggplot(...)). But why is that required in a function and not at the console? Shouldn't I be able to rely on what I do at the console working in a script? Is this inconsistent behavior by design? On Thu, Nov 2, 2017 at 11:54 AM, David Winsemius <dwinsemius at comcast.net> wrote: > >> On Nov 2, 2017,

mybp <- boxplot(count ~ geno * tissue, data = mydata, plot = FALSE) mybp$names <- gsub("\\.", "\n", mybp$names) bxp(mybp) See ?boxplot for details. Best, Ista On Thu, Sep 28, 2017 at 12:40 PM, Ed Siefker <ebs15242 at gmail.com> wrote: > I have data I'd like to plot using the formula interface to boxplot. > I call boxplot like so: > > with(mydata,

Just change the separator: data(Titanic) Titanic.df <- as.data.frame(Titanic) boxplot(Freq~Class*Sex, Titanic.df, cex.axis=.6, sep="\n") See attached .png. ---------------------------------------- David L Carlson Department of Anthropology Texas A&M University College Station, TX 77843-4352 -----Original Message----- From: R-help [mailto:r-help-bounces at r-project.org] On

Why doesn't this work? > samples$geno <- as.data.frame(sapply(yo, toupper), col.names="geno") > samples quant_samples age sapply(yo, toupper) E11.5 F20het BA40 E11.5 F20het BA40 E11.5 F20HET E11.5 F20het BA45 E11.5 F20het BA45 E11.5 F20HET

I have dose response data analyzed with the package 'drc'. 'summary(mymodel)' prints my kinetic parameters. I want that text in an ASCII text file. I want to get exactly what I would get if I copied and pasted from the terminal window. I've read the documentation on data export to text files here:

I have a list of suffixes I want to turn into file names with extensions. suff<- c("C1", "C2", "C3") paste("filename_", suff[[1]], ".ext", sep="") [1] "filename_C1.ext" How do I use lapply() on that call to paste()? What's the right way to do this: filenames <- lapply(suff, paste, ...) ? Can I have lapply()

Hi, I am running Debian Sid. I am having trouble with the R packages. Executing 'help()' or 'demo()' launches 'most' with no text. 'help.start()' works properly. When I try to install a package, I get the following problem: ********************************************************************* > install.packages("ctv") Installing package(s) into

Wait. Now I'm really confused. > > head(samples) quant_samples age sapply(yo, toupper) E11.5 F20het BA40 E11.5 F20het BA40 E11.5 F20HET E11.5 F20het BA45 E11.5 F20het BA45 E11.5 F20HET E11.5 F20het BB84 E11.5 F20het BB84 E11.5 F20HET E11.5 F9.20DKO KTr3 E11.5 F9.20DKO KTr3 E11.5 F9.20DKO E11.5

Hi, I'm trying to set up NFSv4 on two boxes (centos 5.5) and have it authenticate against our Windows 2008R2 AD server acting as the KDC. (samba/winbind is running ok with "idmap config MYCOMPANY: backend = rid" so we have identical ids across the servers.) I can mount my test directory fine via NFSv4 *without* the sec=krb5 option. However, once I put the sec=krb5 option in,

Hi when I use con1 <- socketConnection(...) in R and want to send text from another application written in Delphi to R, do I just have to send the text or do I have to implement more control characters and so on? Is con1 <- socketConnection(port=6011, server=TRUE) writeLines("plot(rnorm(100))", con1) just sending the text in "plot(rnorm(100))" to the socket or is

Greetings, I have a nagging problem with contrasts and I can't seem to resolve it. A factor exists with four levels (lib1, lib2, con1, con2) and when I check the contrasts or set the contrasts to any of the prespecified ones, I do not get the exact contrasts necessary to test the theoretically relevant ones. I need orthogonal contrasts that look just like this matrix: con1 con2

Is there a way I can get the names of the arguments passed to a function from within a function?

Please help me, I use R-1.4.1 and everything works fine. But with R-1.5.1 ist does'nt work: I have this put into a file called "socket.R" while(TRUE){ con1 <- socketConnection(host="localhost",port=6021,server=TRUE); source(con1); close(con1); } So I can use R with: source("socket.R") and R answers me when I send a command to it via socket 6021. But in

Using the package /RMySQL/ I have established a connection ('con1') to a MySQL-Database called 'mc'. This database contains a table called 'mc_2000' which has 200000 observations on several variables. One of these variables is called 'B5' (type 'double'). When I generate a numeric vector in R called 'B6' that has the same length as 'B5': How

I have a list of file names, and a list of data frames contained in those files. mynames <- list.files() mydata <- lapply(mynames, read.delim) Every file contains two columns. > colnames(mydata[[1]]) [1] "Name" "NumReads" > colnames(mydata[[2]]) [1] "Name" "NumReads" I can set the colnames easily enough with a for loop. for (i in

I have an application called dynaterm which I can run successfully under wine but to achieve 110% success I need to pass this application a parameter which must contain double quotes E.G. C:/Program Files/dynaterm8/dynaterm.exe -connect:"con1" So I've tried escaping the quotes and setting the launcher command to wine "C:/Program Files/dynaterm8/dynaterm.exe

Dear All, I am using this query it returns id : id <- dbGetQuery(con1,"SELECT id FROM tenants WHERE name LIKE '%consim%'") But In my case the string "consim" is there in another variable(it is coming from configuration file); > str <- "consim" I am trying to replace the string some this like, but it not working: > id <-

I have a function: myplot <- function (X) { d <- plotCounts(dds2, gene=X, intgroup="condition", returnData=TRUE) png(paste("img/", X, ".png", sep="")) ggplot(d, aes(x=condition, y=count, color=condition)) + geom_point(position=position_jitter(w=0.1,h=0)) + scale_y_log10(breaks=c(25,100,400)) + ggtitle(X) +