similar to: Problem with build and check

I have a local library with functions that interrogates an institution-specific web API, so is not of interest to anyone outside of Mayo. For some reason the R CMD INSTALL command fails. See below: Build the library, then install it. tmt-local2127% R CMD build dart * checking for file ?dart/DESCRIPTION? ... OK * preparing ?dart?: * checking DESCRIPTION meta-information ... OK * installing

It's hard to diagnose this without your package sources / a reproducible example. Shot in the dark: one thing worth checking is that you don't have an entry in your `.Rbuildignore` that's removing files you don't expect it to (maybe that's causing R to strip out the 'doc/index.html' file) Kevin On Fri, May 15, 2015 at 12:54 PM, Therneau, Terry M., Ph.D. <therneau

I have a local library 'dart' that imports "httr". It has routines that access central patient data such as birth date, so it is heavily used locally but of no interest to anyone else. The httr library (and 300 others) are in a shared directory, referenced by everyone in the biostatistics group via adding this location to the .libPaths in their default .Rprofile.

I have a matrix 700x2000 which is sampled in each cycle from another matrix 788x2000 with the numbers 0,1 and 9 There is one specific collumn of this matrix, dart[,1977], that usually, after the samplimg procedure has only 1 and 9 (because the zero frequency in this collumn is low). However, when this happens, I want to include an IF conditional in my code. so basically what i wanted to do was to

Hi All, I'm working on a project converting Dart to llvm. Dart uses a relocating GC but additionally uses pointer tagging. The first bit of a pointer is a tag. For integers a '0' bit is used and for pointers to objects a '1' bit is used. V8 apparently uses a similar technique. Generated code may need to check which bit is used when this information isn't statically known.

Hello, I am having trouble getting the curlPerform function to authenticate using the .netrc file. From the documentation I've read it certainly seems as though this function should be able to authenticate via the .netrc file. The example I am using here comes from the "R as a Web Client- the RCurl package" paper and demonstrates using the .netrc file to access the

I am attempting to deploy OpenSSH. The trouble is I keep getting the rsa_public_encrypt() exponent too small or not odd with the SSH 1 or 1.5 protocols. I can't get OpenSSH to communicate with itself with any protocal other than SSH 2. Platform notes: HP-UX 11.00 Dart 51 64bit OpenSSL 0.9.6 Zlib 1.1.3 Cflags: -Ae I have tried with and without optimizations. I noticed that this problem

Hi all, I''ve been looking for a good example for how one would build a module, but I couldn''t really find something that I liked, so I went ahead and tried to do it myself. The result is this: a git module (see attachment). Please have a look and comment on it, before I add it to the wiki. I especially want comments on the setup of the module itself, not so much on the git

Dear R Community, I am attempting to transpose a dataset from rows to columns but am stuck. I have tried using reshape() with little luck, possibly due to the categorical nature of the data. For example: id<-c(1,2,2,3,3,3) author<-c("j","k","k","l","l","l")

Hi, Has anyone successfully used RCurl for posting data to a password-protected site? I have tired using option netrc=1 with both postForm and curlPerform (with postfields option) but can't authenticate. I would happily provide more details if some one has had some experience with this. Thanks very much. Valerie

I have a nested ANOVA, with a fixed factor "tmt" nested within "site" (random). There are missing values in the data set. aeucs, tmt and site have been defined as objects I have tried: model1=lme(aeucs~tmt,random=~1|tmt/site) I get the following error message Error in na.fail.default(list(aeucs = c(0.833333333, 1, 1, 1, 1, 1, 0.666666667, : missing values in object I

Good afternoon Using R 2.9.2 on a machine running Windows XP I have a longitudinal data set, with data on schools and their test scores over a four year period. I have centered year, and run the following m1.mod1 <- lme(fixed = math_1 ~ I(year-2007.5)*TFC_, data = long, random = ~I(year-2007.5)|schoolnum, na.action = "na.omit") where

Hi All, I'm working with some SAS code to analyze an experiment set up as follows: 66 subjects (colonies) treated with a random treatment (1-8) and measured at three time points. The data structure looks like: input colony tmt y1 y2 y3; y=y1; date=*1*; output; y=y2; date=*2*; output; y=y3; date=*3*; output; datalines; 1

I have a local library which depends on the expm library. The expm library is loaded into my personal space and I have the environment variable R_LIBS_USER set appropriately. The command "library(expm)" works just fine from the command line, and in fact the package works if I do the source() and dyn.load() commands by hand. The following sequence works: tmt% R CMD build

Hello Running R2.9.2 on Windows XP I am puzzled by the performance of LME in situations where there are missing data. As I understand it, one of the strengths of this sort of model is how well it deals with missing data, yet lme requires nonmissing data. Thus, m1.mod1 <- lme(fixed = math_1 ~ I(year-2007.5)*TFC_, data = long, random =

I've done a little snooping around the R Gallery Site (http://addictedtor.free.fr/graphiques/) and the "Statistics with R" site (http://zoonek2.free.fr/UNIX/48_R/all.html), but I can't seem to find what I'm looking for.  Here is the type of plot I would like to draw: (1) 2-D three axis plot where each axis is separated by 120-degrees (would be great if the number of axis

For a datapoint, Julia uses the following function description to implement approximately the capability of those functions. We then also verify that there's no direct inttoptr/ptrtoint into our gc-tracked AddressSpace with a custom verifier pass (among other sanity checks). I can provide additional details and pointers to our gc-root tracking algorithm implementation if desired (I also plan

Hi all, Anyone know how to specify for fetchmail in .netrc the "folder" to read ? If tried folder XYZ and it says unknown token folder. Man page says that should work. Jerry

Martin, I am aware of --vanilla; I use it myself for some testing. In this case R_LIBS_USER was set externally (part of my login) and does not involve any of the R scripts. That means it is inherited by any subprocess. For example: tmt1495% R --vanilla --no-environ R version 3.3.1 (2016-06-21) -- "Bug in Your Hair" Copyright (C) 2016 The R Foundation for Statistical Computing

On Mon, Jun 3, 2019 at 8:04 PM Duncan Murdoch wrote: > I don't recall anyone asking for the zip in the 17 years after that > change, until now (though I haven't been paying attention lately, since > I retired from building the binaries a couple of years ago). > > If you think it's worthwhile to do it, then I don't think anyone would > object if you went ahead and