Displaying 20 results from an estimated 20000 matches similar to: "Turn warnings or notes into errors on CMD check ?"
2014 Jul 09
1
[patch] Rscript off-by-one error in output
Rscript eats up the last argument when reporting the command it runs:
$ Rscript --verbose "/tmp/test.R" one two three
running
'/usr/local/lib/R-devel/lib/R/bin/R --slave --no-restore
--file=/tmp/test.R --args one two'
With the patch below, I get the following:
$ Rscript --verbose "/tmp/test.R" one two three
running
'/usr/local/lib/R-devel/lib/R/bin/R --slave
2013 Aug 03
1
tk + browser() can leave R unresponsive
I don't know if this is a bug. I can reproduce the following on Ubuntu
12.04.2 and 13.04 64-bit with R version 3.0.1 and with r63479. There
is no difference if R is patched with the fix for PR#15407 or not,
although without the fix there are more ways to trigger this.
I can reproduce with the following:
1. Open R in gnome-terminal or xterm
2. Run 'library(tcltk)'
3. Run
2013 Jul 19
1
Posting Guide: changed link and other comment
I have two comments regarding the Posting Guide:
(1) The link in the following sentence did not work for me:
Take care when you quote other people's comments to respect their
rights, e.g., as summarized here[a].
[a] http://www.jiscmail.ac.uk/help/policy/copyright.htm
Has it been changed to the following?
http://www.jiscmail.ac.uk/policyandsecurity/copyrightissues.html
(2) Regarding
2014 Apr 14
1
duplication regression (?)
Below is an example of output that changed as a result of r64970. I
did not see any NEWS item suggesting this change is expected.
Note that the example is contrived and I don't have a use case for it.
I stumbled across it when playing with recent changes in R relating to
duplication. Does the example use undefined syntax?
-----
fn1 <- function(mylist) {
fn1a <- function()
2014 May 20
1
[patch] Add support for editor function in edit.default
Regarding the following extract of ?options:
?editor?: a non-empty string, or a function that is called with a
file path as argument.
edit.default currently calls the function with three arguments: name,
file, and title. For example, running the following
vimCmd <- 'vim -c "set ft=r"'
vimEdit <- function(file_) system(paste(vimCmd, file_))
options(editor =
2013 Sep 09
1
tools::md5sum(directory) behavior different on Windows vs. Unix
tools::md5sum gives a warning if it receives a directory as an
argument on Unix but not on Windows.
>From what I understand, this happens because in Windows a directory is
not treated as a file so fopen returns NULL. Then, NA is returned
without a warning. On Unix, a directory is treated as a file so fopen
does not return NULL so md5 is run and fails, leading to a warning.
This is a good
2014 Jun 13
1
Encourage exit with nonzero error status in ?last.dump
The following example in ?dump.frames
options(error = quote({dump.frames(to.file = TRUE); q()}))
is useful for teaching the user how to save a frame dump when R
encounters an error during non-interactive sessions. This command
however causes an additional change that on encountering an error R
exits with a 0 error status. Although it's just an example, it's an
important one as it's
2013 Oct 12
1
[PATCH] minor suggestions for R-ints manual
Attached is a patch with minor suggestions for the R-ints manual at
r64048. The most substantial change is the following:
The top layer comprises the graphics subsystems. Although there is
-provision for 24 subsystems, after 6 years only two exist, `base' and
+provision for 24 subsystems, since 2001 only two exist, `base' and
`grid'.
Is the year 2001 correct? I base it on the date
2013 Nov 21
1
[PATCH] suggestions for R-lang manual
Attached is a patch with suggestions for the R-lang manual at r64277.
Below are a few comments (some are implemented in the patch):
In the section "Objects", there is a table introduced by "The
following table describes the possible values returned by typeof". One
of the results is "any". Can "any" be returned by "typeof()" ?
Regarding the
2014 Jun 22
1
r65998 build error. share/Rd/macros/*: No such file or directory
As of r65998 I'm getting
/usr/bin/install: cannot stat
?/home/scott/rbuilds/r-devel/repo/share/Rd/macros/*?: No such file or
directory
Commenting out the newly added
@for f in $(srcdir)/Rd/macros/*; do \
$(INSTALL_DATA) $${f} "$(DESTDIR)$(rsharedir)/Rd/macros"; \
done
in share/Makefile.in
fixes compilation for me.
I'm on Ubuntu 13.10. My configure
2013 Apr 04
1
R CMD check --outdir=path gives unknown option '--outdir'
For 'R CMD check', it appears that option '--outdir' is not recognized
and generates warning "unknown option '--outdir'". R CMD check --help
says:
Usage: R CMD check [options] pkgs
[...]
Options:
[...]
-o, --outdir=DIR directory used for logfiles, R output, etc.
(default is 'pkg.Rcheck' in current directory,
2013 Sep 01
1
[PATCH] remove a duplicate tk function definition (and alphabetize)
'tkcoords' is defined twice (in the same way) in src/library/tcltk/R/Tk.R.
Attached is a patch against r63780 that removes the duplicate
definition and alphabetizes the functions.
I've read that minor patches such as this should be sent to r-devel [1].
Scott
[1] http://permalink.gmane.org/gmane.comp.lang.r.devel/33987
--
Scott Kostyshak
Economics PhD Candidate
Princeton
2020 Jan 04
1
[patch] add sanity checks to quantile()
On 04/01/2020 4:35 p.m., Scott Kostyshak wrote:
> On Fri, May 31, 2019 at 01:28:55AM -0400, Scott Kostyshak wrote:
>> The attached patch adds some sanity checks to the "type" argument of
...
> Bump. For this type of patch proposal, is it better to use the
> bug tracker?
For almost any patch proposal it is. Certainly if you don't get action
(or at least discussion)
2019 May 31
2
[patch] add sanity checks to quantile()
The attached patch adds some sanity checks to the "type" argument of
quantile(). Output from the following commands show the change of
behavior with the current patch:
vec <- 1:10
quantile(vec, type = c(1, 2))
quantile(vec, type = 10)
quantile(vec, type = "aaa")
quantile(vec, type = NA_real_)
quantile(vec, type = 4.3)
quantile(vec, type = -1)
Current behavior
2020 Jun 12
1
Marking a ticket as a (potential) regression in bug tracker?
Is there a way to mark a ticket as a potential regression in the bug
tracker? I think the following issue is a regression:
https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17684
I've just tested (2020-06-12 r78687) and what I believe to be a
regression is still there. I don't think the bug has bitten many people,
so I don't think it is critical, but often it is helpful to mark
2013 Dec 28
1
help page of warnings()
Hi,
I raised this issue at stackoverflow and it was suggested to raise it here:
>From the current help page, it is unclear that "warnings()" does not clear
after rm(list=ls()). Currently the page states that:
"Warning: It is undocumented where last.warning is stored nor that it is
visible, and this is subject to change. Prior to R 2.4.0 it was stored in
the workspace, but no
2018 May 04
0
[Rd] source(echo = TRUE) with a iso-8859-1 encoded file gives an error
On Fri, May 4, 2018 at 4:47 PM, Scott Kostyshak <skostyshak at ufl.edu> wrote:
> I have very little knowledge about file encodings and would like to
> learn more.
>
> I've read the following pages to learn more:
>
> http://stat.ethz.ch/R-manual/R-devel/library/base/html/Encoding.html
>
2013 Oct 03
0
[PATCH] file.access returns success for NA
Currently on R I get the following:
> file.access(c("doesNotExist", NA))
doesNotExist <NA>
-1 0
where 0 means success. Is the 0 correct? I was expecting either NA or -1.
?file.access does not mention how NA values should be handled. The
subsection "3.3.4 NA handling" from the R Language Definition manual
suggest to me that file.access should return NA if given
2014 Jun 29
0
[patch] Fix n arg in mclapply call to ngettext
Regarding the following code,
warning(sprintf(ngettext(has.errors,
"scheduled core %s encountered error in user code, all values of
the job will be affected",
"scheduled cores %s encountered errors in user code, all values
of the jobs will be affected"),
paste(has.errors, collapse = ", ")),
domain = NA)
has.errors is a vector whose elements are the
2014 Apr 24
1
50% performance of custom R build compared to PPA R for a command
Hi,
I have R installed from the Ubuntu PPA and a local build of R (more
details below). I will refer to these as "R" and "R-devel",
respectively. I've reproduced the following on Ubuntu 13.10 and 14.04.
Below is an example (which requires the bootstrap package) that takes
10 seconds for me to run with R-devel and 5 seconds with R
library(bootstrap)
str(tooth)
theta <-