Displaying 20 results from an estimated 1000 matches similar to: "how to list external dependencies (i.e., non-R packages)?"
2014 Jul 04
1
DESCRIPTION.in file causes R CMD check to fail?
hi. i'm building a package using autotools. to propagate the package
version number from configure.ac to DESCRIPTION, i'm using a
DESCRIPTION.in file. both of these files are "shar"'d below.
i need to distribute the DESCRIPTION.in file, as ./configure will need
it. but, "R CMD check" wants to look at DESCRIPTION, so i've let that
also come into the package
2009 Jul 03
5
Can't install RMagick due to MagickWand problems
Hello,
I''m trying to install/update rmagick on a Debian machine using:
gem install --local rmagick-2.10.0.gem
and get following error:
/usr/local/bin/ruby extconf.rb install --local rmagick-2.10.0.gem
checking for Ruby version >= 1.8.5... yes
checking for gcc... yes
checking for Magick-config... yes
Warning: Found more than one ImageMagick installation. This could cause
problems at
2005 Dec 20
1
imlib2-loader_jpeg RPM Needed
Hi All,
was trying to install eterm rpm, and got the below dependencies errors,
Eterm-0.9.3-1.i386.rpm
[root at status1 eterm]# rpm -Uvh Eterm-0.9.3-1.i386.rpm
error: Failed dependencies:
imlib2 is needed by Eterm-0.9.3-1.i386
imlib2-loader_jpeg is needed by Eterm-0.9.3-1.i386
imlib2-loader_png is needed by Eterm-0.9.3-1.i386
libImlib2.so.1 is needed by
2004 Aug 03
1
Unmet dependency prevents r-gnome installation in Debian stable (PR#7151)
Full_Name: Kimmo Uusitalo
Version: 1.8.0-1
OS: Debian 3.0 "Woody"
Submission from: (NULL) (128.214.205.4)
r-gnome 1.8.0-1 requires gdk-imlib2 which is not available in Debian 3.0 stable.
I have the following in /etc/apt/sources.list :
deb http://cran.r-project.org/bin/linux/debian woody main
Btw, it would be very nice to have the newest version of R even for Debian
stable.
2012 Dec 12
3
SystemRequirements’ field
Am I correct in thinking that the ?SystemRequirements? field in a
package DESCRIPTION file is purely descriptive, there are no standard
elements that can be extracted by parsing it and used automatically?
This field does not seem to be widely used, even for some obvious cases
like backend database driver requirements, perl, perl modules, etc.
It might help to have a list of possibilities. Some
2020 Mar 13
7
pipe(): input to, and output from, a single process
hi. i'd like to instantiate sed(1), send it some input, and retrieve
its output, all via pipes (rather than an intermediate file).
my sense from pipe and looking at the sources (sys-unix.c) is that is
not possible. is that true? are there any thoughts of providing such a
facility?
cheers, Greg
2008 Apr 21
4
[PATCH] liboggplay - kate support, build fixes, and misc
Hi,
I've added kate support to liboggplay (a prerequisite to getting kate tracks
to work with the mozilla plugin, which I've now got working on Linux).
In addition to the Kate code:
- a new oggplay-uninstalled.pc file
- configure.ac checks for C++ compiler
- no check for fishsound version - it wanted 0.8.0, but the svn itself
was 0.7.1 !?
- don't use imlib2 (nor dump-first-frame) if
2014 Jul 01
1
creating a package from a development source tree
hi. this is sort of a software methodology question.
i'm working on developing a package (with C source code). developing
it, i use autotools, git, make, and such like. as a result, there are
random files in my source code directory that "R CMD check" would rather
not see. some of these files (such as .git and friends) i could arrange
to move to "just above" my
2013 Feb 14
4
2 setGeneric's, same name, different method signatures
hi. below is a small test case (hopefully minimal, though i'm still a
bit confused about initializers).
i would have guessed (and maybe i still would have been right) that one
could re-use the name of a generic function for functions with different
numbers of arguments. in the case below, class A's bB() queries the
status of a single A object, so bB(A) (where here "A" is an
2018 Jun 01
1
Understanding the sequence of events when calling the R dpois function
Chuck and Greg,
Thanks a lot for your help! I have a much better understanding now of what is happening ?under the hood?.
Kind Regards,
Jason
> On 31 May 2018, at 20:08, Greg Minshall <minshall at acm.org> wrote:
>
> Jason,
>
> as Chuck Berry (to whom, *thanks* for 'do {...} while(0)'!) suggested,
> using grep, or even grep executed from find, such as
>
2015 Jan 23
2
No symlink support on SMB2 and SMB3?
On Fri, Jan 23, 2015 at 10:23:15PM +0100, Markus Doits wrote:
>
> On 23.01.15 22:16, Ralph B?hme wrote:
> > On Fri, Jan 23, 2015 at 01:08:31PM -0800, Jeremy Allison wrote:
> >> On Fri, Jan 23, 2015 at 10:05:44PM +0100, Markus Doits wrote:
> >>> On 23.01.15 19:57, Miguel Medalha wrote:
> >>>> I am using Samba 4.1.16 with smb2/3 and symbolic links are
2020 Mar 16
1
pipe(): input to, and output from, a single process
Gabor, thanks. yes, managing the two-way communication is always a bit
error-prone, as it depends on the input/output characteristics of the
two ends -- they either match, or deadlock. it's too bad if polling is
always *required* -- i'd think sometimes a programmer would be happy
blocking, though other times one wants better control over when to
block. cheers, Greg
2007 Nov 22
1
Package specific dependencies...
Hi,
I noticed recently when installing the GDD package for R under
GNU/Linux that it required the gd library (http://libgd.org/) for
generating graphics.
The resolution of this was to simply install the library on my system,
and then GDD successfully installed without any complaints.
However, the variant of GNU/Linux that I use is Gentoo, so I filed a
bug requesting that a USE flag be set for
2018 May 31
3
Understanding the sequence of events when calling the R dpois function
Hello all,
I am trying to get a better understanding of the underlying code for the stats::dpois function in R and, specifically, what happens under the hood when it is called. I finally managed to track down the C course at: https://github.com/wch/r-source/blob/trunk/src/nmath/dpois.c. It would seem that the dpois C function is taking a double for each of the x and lambda arguments so I am a bit
2009 Jul 13
7
[ANNOUNCEMENT] cran2deb: 1700+ new Debian / R packages
Announcing cran2deb: 1700+ Debian packages from almost all of CRAN
------------------------------------------------------------------
Last Friday's presentation at UseR! 2009 was the first really public mention
of 'cran2deb'. It provides Debian packages of all of CRAN. It started as
Charles' project from last year's Google Summer of Code, was further extended
by us over the
2005 Sep 20
1
configuration and installation of R packages with C/C++ library dependencies.
Dear R-developers, Bioc-developers,
I am working on an R package which provides a R binding to a C library,
which again depends on two other "non-standard" C++ libraries.
I have this libraries installed on my box of course and I specified the
library location in the Makevars file.
However I thinking about to make the package available to other users
and wonder
a) Where I should
2018 Feb 16
2
error in loading rgdal package
Hi R users,
Could you help me to see this problem? I could now load "rgdal" even though
I downloaded the compressed folder. Thanks for your help.
Loading required package: sp
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object
'/Library/Frameworks/R.framework/Versions/3.3/Resources/library/rgdal/libs/rgdal.so':
[[alternative HTML version deleted]]
2015 May 13
2
Alternative for wildcard gnu extension in Makevars
I have some cpp-files from another library (boost) in a subdirectory
in my src directory (src/boost_src). I include these using the
following two lines in my Makevars:
SOURCES = $(wildcard *.cpp boost_src/*.cpp)
OBJECTS = $(SOURCES:.cpp=.o)
However, R CMD check complains about my use of 'wildcard'. How do I
handle this without any gnu extensions?
Thanks.
Jan
2008 Apr 28
3
[PATCH] browser_plugin - kate support, build fixes, and misc
Hi,
this patch adds:
- kate support (what else) - this bumps the Javascript API to 1.1
- a few build fixes (note that the adding of -L/usr/X11/lib -lX11
looks suspect to me, that shouldn't be needed, so you may want to
leave it out if you think so as well - it's odd as X11 using programs
do configure fine on that box)
- bad pointer dereference fix (mouse callback)
- avoid the input
2020 May 22
2
GCC warning
I am trying to submit a package on CRAN, and everything passes ok on all platforms but Debian, where CRAN responds with an automatic "significant" warning:
* checking whether package ?QCA? can be installed ... [35s/35s] WARNING
Found the following significant warnings:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:10: warning: ?__builtin_strncpy? output may be truncated