Displaying 20 results from an estimated 300 matches similar to: "Arithmetic Error while compiling R with the Intel compilers"
2012 Aug 21
1
make check fails two tests on RHEL 6 build
I am installing R 2.15.1 onto RHEL 6, using gcc 4.7.0 with Intel MKL
10.3.7 and the following environment:
export BLAS_LIBS="-Wl,--start-group
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_gf_lp64.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_sequential.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_core.a -Wl,--end-group
-lpthread"
export LAPACK_LIBS="-Wl,--start-group
2014 Oct 22
1
"make check" fails on lapack.R and stats-Ex.R
Hi folks,
I suspect this is a request for a sanity check than a bug report:
I've been successfully compiling an optimised version of R for several years using the Intel compiler and MKL. I've just test-run the new Intel 15.0 compiler suite, and I'm seeing a few numeric failures that I don't see using the same build method with Intel 13.0. I've attached the output of
2012 Oct 26
4
R 2.15.2 is released
The build system has rolled up R-2.15.2.tar.gz (codename "Trick or Treat") at 9:00 this morning. This is a maintenance release; see the list below for details.
You can get it from
http://cran.r-project.org/src/base/R-2/R-2.15.2.tar.gz
or wait for it to be mirrored at a CRAN site nearer to you.
Binaries for various platforms will appear in due course.
For the R Core Team
Peter
2012 Oct 26
4
R 2.15.2 is released
The build system has rolled up R-2.15.2.tar.gz (codename "Trick or Treat") at 9:00 this morning. This is a maintenance release; see the list below for details.
You can get it from
http://cran.r-project.org/src/base/R-2/R-2.15.2.tar.gz
or wait for it to be mirrored at a CRAN site nearer to you.
Binaries for various platforms will appear in due course.
For the R Core Team
Peter
2012 Oct 26
4
R 2.15.2 is released
The build system has rolled up R-2.15.2.tar.gz (codename "Trick or Treat") at 9:00 this morning. This is a maintenance release; see the list below for details.
You can get it from
http://cran.r-project.org/src/base/R-2/R-2.15.2.tar.gz
or wait for it to be mirrored at a CRAN site nearer to you.
Binaries for various platforms will appear in due course.
For the R Core Team
Peter
2006 Dec 05
1
problem with lists...
Hi guys,
I am new to R, so sorry if my problem seems trivial.
Sometimes I encounter some lists, which I cannot index their components
with [ . ]
For instance the prcomp() function returns a 'prcomp' object whose
components are some 'lists'. the second component is a list that
comtains the following:
> mylist <- churn[2]
> class(mylist)
[1] "list"
>
2004 Nov 11
1
FW: problem building an R package under Windows XP with calls to NAG C routines
On Thu, 11 Nov 2004 11:19:25 -0800, "Romain Neugebauer"
<romain at berkeley.edu> wrote :
>Dear Duncan Murdoch,
>
>I just posted the following message to the R-help mailing list in
>response to your email of October 29th (see below). Unfortunately it
>looks like my new message was not correctly posted, i.e. it does not
>appear as a reply to yours but as a new
2007 May 21
0
Is this a bug in cv.lm(DAAG) ?
Dear R-list,
I'm not sure what I've found about a function in DAAG package is a bug.
When I was using cv.lm(DAAG) , I found there might be something wrong with
it. The problem is that we can't use it to deal with a linear model with
more than one predictor variable. But the usage documentation
hasn't informed us about this.
The code illustrates my discovery:
> library(DAAG)
2004 Oct 29
1
problem building an R package under Windows XP with calls to NAG C routines
Hello all,
I was able to create R packages under windows XP in the past using the
dynamic NAG C library for windows XP (Mark 6).
Recently, I changed computers and I am now using the static NAG C library
for windows XP (Mark 7) to create a simple R package (called "test") which
simply returns random numbers simulated using repetitive calls to a NAG C
routine (uniform random
2009 Mar 16
6
R with MKL
Hi,
I have seen a lot of problems from people trying to compile R with
MKL. So I am writing my experience in case it helps and to ask one
question. I installed R-2.8.1.patched in Ubuntu 9.04 (gcc 4.3.3) using
MKL 10.1.1.019.
I configured correctly (following MKL userguide) with :
sudo ./configure --with-blas="-I/opt/intel/mkl/10.1.1.019/include
-L/opt/intel/mkl/10.1.1.019/lib/em64t
2009 Mar 16
6
R with MKL
Hi,
I have seen a lot of problems from people trying to compile R with
MKL. So I am writing my experience in case it helps and to ask one
question. I installed R-2.8.1.patched in Ubuntu 9.04 (gcc 4.3.3) using
MKL 10.1.1.019.
I configured correctly (following MKL userguide) with :
sudo ./configure --with-blas="-I/opt/intel/mkl/10.1.1.019/include
-L/opt/intel/mkl/10.1.1.019/lib/em64t
2008 Jan 13
1
What is the 'scale' in princomp() function?
Dear R users,
When I tried to use princomp() from stats packages to do Principal
Components Analysis, I am not very clear what is the "scale".
And the scores are different from "PROC PRINCOMP" procedure from SAS.
Using the example data from this package:
restpc <- princomp(USArrests, cor = TRUE)
> restpc$scale
Murder Assault UrbanPop Rape
4.311735 82.500075
2008 Mar 06
0
Help with colinearity problem in multiple linear regression
Hello,
For basic linear regression lm() does the job well, for datasets that are
larger than memory biglm() seems to work.
I'm working on a parallel implementation of multiple linear regression for
datasets that are too large for memory.
Currently I am working over least squares:
calculating: t(X) %*% X and t(X) %*% y
separately in parallel on each node
This generates a
2008 Jul 15
3
playwith package crashes on Mac
Dear R-helpers,
I tried the playwith packages for the first time, and it crashed R:
> require(playwith)
Loading required package: playwith
Loading required package: lattice
Loading required package: grid
Loading required package: gWidgets
Loading required package: gWidgetsRGtk2
Loading required package: RGtk2
Loading required package: cairoDevice
> sessionInfo()
R version 2.7.1
2007 Jun 27
1
Condensed PCA Results
Hello all,
I'm currently using R to do PCA Analysis, and was wondering if anyone knew the
specific R Code that could limit the output of the PCA Analysis so that you
only get the Principal Component features as your output and none of the
extraneous words or numbers that you don't want.
If that was unclear, let me use linear regression as an example:
"lm(y~x)" is the normal
2011 Sep 09
2
prcomp: results with reversed sign in output?
Dear All,
when I'm running a PCA with
prcomp(USArrests, scale = TRUE)
I get the right principal components, but with the wrong sign infront
Rotation:
PC1 PC2 PC3 PC4
Murder 0.5358995 -0.4181809 0.3412327 0.64922780
Assault 0.5831836 -0.1879856 0.2681484 -0.74340748
UrbanPop 0.2781909 0.8728062 0.3780158 0.13387773
Rape 0.5434321 0.1673186 -0.8177779 0.08902432
instead of
PC1 PC2 PC3 PC4
2011 Jan 13
1
Unexpected behaviour of write.csv - read.csv
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Hi
Assuming the following:
> x <- data.frame(a=1:10, b=runif(10))
> str(x)
'data.frame': 10 obs. of 2 variables:
$ a: int 1 2 3 4 5 6 7 8 9 10
$ b: num 0.692 0.325 0.634 0.16 0.873 ...
> write.csv(x, "x.csv")
> x2 <- read.csv("x.csv")
> str(x2)
'data.frame': 10 obs. of 3 variables:
$ X:
2020 Jul 10
3
Compilation error for R 4.0.2
Hello,
I experienced a compiler error when I tried to compile the latest version
of R i.e. R4.0.2
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
grep.c(74): catastrophic error: cannot open source file "pcre2.h"
# include<pcre2.h>
(The pcre2.h header file is actually present!)
I used the
2008 Jan 25
4
Problem building R with Intel MKL v10 BLAS
NO
Hi. I'm not sure if this is an R-help or R-devel problem, so I'm
starting here in the hope that someone can help (and willing to go to
the other list if it's more appropriate). I think I am following all of
the instructions in the various manuals, but clearly I am missing something.
I have an Intel EM64T Dell with 2 dual-core Xeon processors running Red
Hat EL5. I would
2004 Nov 11
1
problem building an R package under Windows XP with calls to
Thank you very much for your help.
I was able to figure out a way to make this simple package work and was
able to build a more useful and complex package as well. I am however
left with one problem when building that more complex package. Before I
go on with this issue, here is how I solved my initial problem:
After creating an R package directory structure, I included in the \src
directory