similar to: Relative Cumulative Frequency of Event Occurence

Dear R-users, I'm studing a DB, structured like this (just a little part of my dataset): _____________________________________________________________________________________________________________ Site Latitude Longitude Year Tot-Prod Total_Density dmp Dendoudi-1 15.441964 -13.540179 2005 3271.16 1007 16993.25 Dendoudi-2 15.397321 -13.611607

Dear R users I have a big matrix like 6021 1188 790 290 1174 1015 1990 6613 6288 100714 6021 1 0.658 0.688 0.474 0.262 0.163 0.137 0.32 0.252 0.206 1188 0.658 1 0.917 0.245 0.331 0.122 0.148 0.194 0.168 0.171 790 0.688 0.917 1 0.243 0.31 0.122 0.15 0.19 0.171 0.174 290 0.474

hello, i have been using ccf() to look at the correlation between lightning and electrogamnetic data. for the most part it has worked exactly as expected. however, i have come across something that puzzles me a bit: > x <- c(1, 0, 1, 0, 1, 0) > y <- c(0, 0, 0, 0, 0, 0) > ccf(x, x, plot = FALSE) Autocorrelations of series 'X', by lag -4 -3 -2 -1 0

Hi, I want to analyse DNA sequence data (mtDNA) in R as in calculate Fst, Heterozygosity and such summary statistics. Package Adagenet converts the DNA sequence into retaining only retaining the polymorphic sites and then calcuates Fst.. but is there any other way to do this? I mean analyse the DNA sequence as it is.. and calculate the statistics? Thanks! [[alternative HTML version deleted]]

Hi, When I look at the summary of an rpart object run on my data, I get 7 nodes but when I plot the rpart object, I get only 3 nodes. Should the number of nodes not match in the results of the 2 functions (summary and plot) or it is not always the same? Look forward to your reply, Carol -------------------------------------------- ?summary(rpart.res) Call: rpart(formula = mydata$class ~ ., data

Dovecot-2.0.3 reported: Error: Maildir: Found unwanted directory /path/to/mail/user/cur/:2,FST, but rmdir() failed: Directory not empty and sure enough, this directory really does exist and contain a valid message file: # cd /path/to/mail/user/cur/ # ls -lR total 384 drwx------ 8 vmail vmail 272 Sep 24 09:06 . drwx------ 13 vmail vmail 442 Sep 24 09:06 .. -rw------- 5 vmail vmail

Good Morning. Below I like statement like j<-grep(".r\\b",colnames(mydata),value=TRUE); j with the \\b option which I read long time ago which Ive found useful. Are there more or these options, other than ? grep? Thanks. dstat is just my own descriptive routine. > x ?[1] "age"????????? "sleep"??????? "primary"????? "middle" ?[5]

Good afternoon. I am a master student in University of Porto in Portugal. At this moment I’m starting to use R, so I have some doubts. The aim of my analysis is: calculate a pairwise FST matrix from fasta file and creat a principal component analyses with adegenet package (I use seqinr and ape package to read this file, then I convert this file into a genind object with DNA2genind function

Dear List members I want to do the sliding window analysis of some specific values. Here is my code: require(zoo) dat <- read.table("chr1.txt", header = TRUE, sep="\t") dat2 <- cbind(dat[1,3]) #The first column is also important. It represents the position of the site on the chromosome. TS <- zoo(c(dat2)) a <- rollapply(TS, width=1000000, by=200000, FUN=mean,

Hi, Did you try install.packages('stats'). Let we know about your Sys.info() Karim On Fri, Jan 12, 2018 at 5:37 PM, imane hajar <imane.chafiki.fst at gmail.com> wrote: > hello , > > i am so sorry , i figure it out. > > im sending this msj to the moderator to stop the approval of the mail . > > have a good day. > > > 2018-01-12 15:42 GMT+00:00 imane

Hello, I am trying to copy, on the same server, a set of files. I need to copy them every day with a cron job. This is working fine the only problem is that he always changes the owner and group to the root user. Is there a possibility that he uses the user of the remote files and not the root user ? rsync --archive --exclude ".htaccess" /home/virtual/site5/fst/var/www/ html/

?s 02:10 de 02/08/2024, Steven Yen escreveu: > Good Morning. Below I like statement like > > j<-grep(".r\\b",colnames(mydata),value=TRUE); j > > with the \\b option which I read long time ago which Ive found useful. > > Are there more or these options, other than ? grep? Thanks. > > dstat is just my own descriptive routine. > > > x > ?[1]

Buenas tardes, Tengo un gráfico de dispersión y quiero indicar cada punto a qué individuo corresponde. ¿Cómo añado estas etiquetas de datos? El código es: res<-cmdscale(fst,k=2) plot(res[,1],res[,2],lwd=2,xlab="x",ylab="y") abline(h=0,v=0,col="blue") Muchas gracias, Gemma [[alternative HTML version deleted]]

On 12/01/2018 1:11 PM, Karim Mezhoud wrote: > Hi, > Did you try install.packages('stats'). That will not work, as stats is a base package. It comes with R, and can't be changed. The stats package should never be missing in a proper install of R. Duncan Murdoch > Let we know about your Sys.info() > Karim > > On Fri, Jan 12, 2018 at 5:37 PM, imane hajar

Hi, I am debugging private backend and faced interesting problem: sometimes spill hoisting creates double stores. (some output from -debug-only=regalloc). First hoisting: Checking redundant spills for 0 at 16r in %vreg19 [16r,144B:0)[144B,240B:1)[240B,280r:2)[296r,416B:3)[416B,456r:4)[472r,592B:5) 0 at 16r 1 at 144B-phi 2 at 240B-phi 3 at 296r 4 at 416B-phi 5 at 472r Merged to stack int: SS#0

On Tue, Feb 07, 2017 at 04:14:16PM +0100, Cédric Bosdonnat wrote: > Getting checksum involves the same code than verifying them. Create > a get_checksum function and use it in verify_checksum. > --- > mllib/checksums.ml | 25 ++++++++++++++++--------- > mllib/checksums.mli | 9 +++++++++ > 2 files changed, 25 insertions(+), 9 deletions(-) > > diff --git

CentOS Experts, I am receiving the following in /var/spool/mail/root. I cleaned out the file and then rebooted and the same errors came back. Is it possible to analyze the data and advise if there is an issue with my system? This is a completely fresh install. From user at localhost.srv.net Tue Jan 17 08:11:56 2012 Return-Path: <user at localhost.srv.net> X-Original-To: root at

Yes, You are right. I mean install.packages('DVstats'). Actually, it seems that DVstats does not have maintainer https://github.com/USGS-R/DVstats Karim On Fri, Jan 12, 2018 at 7:20 PM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > On 12/01/2018 1:11 PM, Karim Mezhoud wrote: > >> Hi, >> Did you try install.packages('stats'). >> > > That

hello , i am so sorry , i figure it out. im sending this msj to the moderator to stop the approval of the mail . have a good day. 2018-01-12 15:42 GMT+00:00 imane hajar <imane.chafiki.fst at gmail.com>: > hello, > Can you please give me a hand with this problem,well i can't install > these packages: > - stats > - methods > - stats4 > > when i tried the

Hello, We've had a build that hit the following assert: AddressSanitizer CHECK failed: /var/lib/jenkins/jenkins/workspace/fst-clang/local/src/llvm/llvm-3.9.0.src/projects/compiler-rt/lib/asan/../sanitizer_common/sanitizer_allocator.h:1078 "((idx)) < ((kMaxNumChunks))" (0x40000, 0x40000) Increasing the limit and recompiling seems like the obvious workaround, but I'm wondering