similar to: rJava segmentation fault

Hi, I was trying install rJava package but failed to install with below error: *trying URL 'https://cloud.r-project.org/src/contrib/rJava_0.9-11.tar.gz <https://cloud.r-project.org/src/contrib/rJava_0.9-11.tar.gz>'* *Content type 'application/x-gzip' length 675188 bytes (659 KB)* *==================================================* *downloaded 659 KB* ** installing

Dear all, Installing rJava fails. The message was listed below. I wonder why cpp flag could not be detected, although I had installed. Thanks!!! -Jiacheng R CMD INSTALL rJava_0.9-0.tar.gz * installing to library ‘/data1/mri_researchers/wexler_data/jiacheng/R-2.12.0/library’ * installing *source* package ‘rJava’ ... checking for gcc... gcc -std=gnu99 checking for C compiler default output file

Morning All: Having problems installing this one into my R setup and wondered if anyone on the list had the same problem and found a workable solution. First to the system particulars: OS is the Hardy Heron edition of Ubuntu Linux R version is 2.13.1 Java installation is sun-java6 Next up is the result of javareconf: R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.5.0

Morning All: Having problems installing this one into my R setup and wondered if anyone on the list had the same problem and found a workable solution. First to the system particulars: OS is the Hardy Heron edition of Ubuntu Linux R version is 2.13.1 Java installation is sun-java6 Next up is the result of javareconf: R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.5.0

Hi all, When I installed rJava from source, rJava installation was failed with below messges. $ R CMD INSTALL rJava_0.9-4.tar.gz ....... ....... ....... gmake[1]: Leaving directory `/tmp/RtmpNwiCae/R.INSTALL4ebb76a3400d/rJava/jri' installing via 'install.libs.R' to /stat/R-2.15.1/lib/R/library/rJava ** R ** inst ** preparing package for lazy loading ** help *** installing help

Hello, I just installed rJava on [root at UG13 ~]# R --version R version 2.9.0 (2009-04-17) runing on a [root at UG13 ~]# cat /etc/redhat-release CentOS release 5.3 (Final) This is the output of [root at UG13 ~]# R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.4.2_18 Java home path : /usr/java/j2sdk1.4.2_18/jre Java compiler : /usr/bin/javac Java headers gen.:

Hi, we're trying to install rJava on SLES 11. With: R CMD INSTALL rJava_0.9-3.tar.gz It says: configure: error: One or more Java configuration variables are not set. Make sure R is configured with full Java support (including JDK). Run R CMD javareconf as root to add Java support to R. So we run: R CMD javareconf It says: Updating Java configuration in /apps/R-2.14.2/lib64/R Done. and

Hi Ista! Thanks a lot for your support!! It puzzles me because it?s the first time that something like this happens to me. I?m aware that root and user don?t have the same environmental variables here. However, I don?t know why root chooses Java 9 and my user chooses Java 10. Isn?t Java 10 ready to be used as a root? It seems that we are going to have to wait until rJava releases a new

Good Morning, I'm trying to install the rJava package on a local (work) machine and having some trouble. The following occurred in an RGui session. > sessionInfo() R version 2.13.0 (2011-04-13) Platform: i386-pc-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C [5]

On 10 October 2009 at 05:40, lmramba at gmail.com wrote: | > library(rJava) | Error in library(rJava) : there is no package called 'rJava' | > install.packages("rJava") | Warning in install.packages("rJava") : | argument 'lib' is missing: using '/usr/local/lib/R/site-library' | --- Please select a CRAN mirror for use in this session --- | Loading

> library(rJava) Error in library(rJava) : there is no package called 'rJava' > install.packages("rJava") Warning in install.packages("rJava") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL

Hi, I am unable to install the package rJava. I tried doing what the output suggests, but it doesn't help. How can I get R to find/recognize my Java installation? I am running R-2.15.0. waichler at snow> sudo R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.6.0_22 Java home path : /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre Java compiler : /usr/bin/javac Java

Thanks Sebastian, Johannes and Dirk for your inputs, I think this can be marked [SOLVED] though I still don't understand how it started. The answer seems to be that something sets an environment variable JAVA.LIBRARY.PATH and this wasn't set correctly. I had never directly done anything to set that so that's odd but what I had done that was causing the problem (I think) is that I had

Hi I am using ubuntu 8.04 and faced some problems when installing rJava. What I did first was install.packages("rJava") but I could not proceed since: "checking Java support in R... configure: error: absent R was configured without Java support. Please run R CMD javareconf as root to add Java support to R." afterwards I took Alt+F2 and typed: gksudo R CMD javareconf

Hi I am using ubuntu 8.04 and faced some problems when installing rJava. What I did first was install.packages("rJava") but I could not proceed since: "checking Java support in R... configure: error: absent R was configured without Java support. Please run R CMD javareconf as root to add Java support to R." afterwards I took Alt+F2 and typed: gksudo R CMD javareconf

Hello, I am running: R version 2.10.0 (2009-10-26) Copyright (C) 2009 The R Foundation for Statistical Computing ISBN 3-900051-07-0 on a 64-bit RedHat box. To encourage collegues to use R, I am trying to install "JGR", which depends on "rJava", on the above machine. At first I received and error saying Java was not available. My IT support, I am not admin. on this

Having difficulties getting rJava to install on my Debian Squeeze box. Perused the R-help list and tried some things that have worked for others but not for me. Below is the output of my attempted build, R CMD javareconf -e, and sessionInfo(). Note I tried the R CMD javareconf also as root, restarted R after each of these, all no help. * Installing *source* package ?rJava? ... checking for

Good afternoon, A strange one - library(rJava) works for root but not for user sean On 64-bit Ubuntu 9.10, using R as root (sudo -i), I can say library(rJava) and it works fine with no error message of any kind. But logged in as myself user "sean", it can't start... sean at SeansPC:~$ R --no-save --vanilla R version 2.10.1 (2009-12-14) Copyright (C) 2009 The R Foundation for

Hi All, Running R CMD javareconf -e (or R CMD javareconf as root I am rot on my machines) Fails. / [root at penguins1lanalt etc]# R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.6.0_30 Java home path : /usr/java/jre1.6.0_30 Java compiler : not present Java headers gen.: Java archive tool: Java library path:

I am really no java lover, but for some reason had interested to look at an R package that depends on rJava... and when I tried, I was *again* (it is my usual experience for more than 10 years) unable to get rJava installed, as indeed, also 'R CMD javareconf' ended in an error that jni.h was not found. I see the issue here,