similar to: Correct scaling of axis in persp3d plot

Hello all, I am trying to use computer modern fonts in my r grahics. I tried to do, as described here: http://www.stat.auckland.ac.nz/~paul/R/CM/CMR.html but unfortunately, it does not work. First of all I downloaded the cm-lgc package and the AFM and PFB-files from the page and put them in my R working directory, so far, so good. Then I tried to run the following code: > sn <-

Hi All. I have created two, 3-D, color graphs using persp(). Z values range from 1 to 100 on the first plot, and 0.5 to 50 on the second plot. I would like to keep the color range constant between the two graphs, rather than each graph showing the full range of colors. So the first graph should go from yellow to red and the second graph should go from yellow to orange. Below I present a

I have drawed a picture with persp, it's 3d map with different color, indicate different altitude. In gnuplot, the corresponding command 'splot' will generate a picture beside to indicate the relationship between color and altitude. But in R, how to draw it? I have read the manual of legend, but they are all about how to draw a legend with colored text, not a continuous varing color

Dear R-users, within the rgl-package, I would have a question about the usage of persp3d in combination of rgl.viewpoint. I am not able to figure out how to let a 3D plot rotating around likewise the example in ?rgl.viewpoint. It seems that when I use persp3d(...) I see something on my screen, which is different from what I get when it's rotating. Is there any different behavior between

Dear R-users, I would like to place two 3D plots side-by-side in a rgl-setting. It would nice to have something like "par(mfrow=c(1,2))" for basic plots, or an array framework for wireframe(lattice) (see example below). I only managed to overlap two persp3d plots. My final idea would be to animate both surfaces using play3d(rgl). Thanks in advance for any help. Best, Carlo Giovanni

Hi guys, I hit on a problem when I use rgl. Could you try to run the code here in this link and see why the first persp3d gives a red bounding box and the second shows black? http://rafb.net/p/g1i7ur33.html (sorry for not pasting the code here directly but my previous email got filtered by this list so I suspect my code looks like spam to the spam filter) I'm expecting black color to be

Dear all, I have tried to plot a triangular matrix with the function persp3d(rgl). for example z=rbind(c(1,NA,NA,NA),c(5,3,NA,NA),c(4,2,9,NA),c(8,6,5,11)) x=1:4 y=1:4 persp3d(x,y,z,color="gray") The two extreme points are not plotted (value=1 and value=10). It seems because the half of the matrix have 'NA' and perp3d need planar quadrilateral face. So I decided to use the

G'day everyone, I've been trying to get an interactive OpenGL plot to work from within Python 2.6 using Rpy2 and the persp3d function. The problem is that the plot seems to freeze upon activation. All interactivity is lost even though it works fine when run from within the R console (version 2.11.1). Is this a known issue? Any ideas as to what might be causing this, or possibly how to fix

Dear R users, I have been trying to draw the following 3d graphs: The solid region bounded above by the paraboloid z = 9 - x2 - y2 and below by the unit circle in the xy-plane. I wanted to visualize the solid region bounded by those two graphs. I could draw those two 3d graphs separately, but I could not get those two to work in one single plot. Here's my code for the paraboloid: x <-

Hi everyone,   I'm trying to do an Logistic Politomic Regression in R. Because I have my resposes variables and the aswer is 0 and 1 in 3 bacterial genes. Somebody know how to do this in R in a easy way?   Thank so much,   José Bustos Facultad de Ciencias Universidad Catolica Ssma. Concepcion Chile --- El lun, 31/8/09, r-help-request@r-project.org <r-help-request@r-project..org>

Dear expeRts, I am a new user of rgl, below is my first trial to plot a simple function in 3d. I managed to put the axes in the right locations, but: (1) The xlab, ylab, and zlab arguments are ignored; how can I put in axes labels? (2) Since I removed the axes in persp3d() the viewport is too small; is it possible to keep the size of the viewport? (3) The box is not correctly drawn, there

Hi the list, Is there a way to give a matrix to a C function, and then to use it as a matrix ? I write a function to print a matrix, but I use it as a vector : 1. void printMatrix(double *mTraj,int *nbCol, int *nbLigne){ 2. int i=0,j=0; 3. for(i=0 ; i < *nbLigne ; i++){ 4. for(j=0 ; j < *nbCol ; j++){ 5. Rprintf(" %f",mTraj[i * *nbCol + j]); 6. } 7.

Hi Sacha, On second thought, perhaps this is more the direction that you want ... X2 = cbind(X_train,y_train) colnames(X2)[3] = "y" regr2<-randomForest(y~x1+x2, data=X2,maxnodes=10, ntree=10) regr regr2 #Make prediction predictions= predict(regr, X_test) predictions2= predict(regr2, X_test) HTH, Eric On Tue, May 9, 2023 at 6:40?AM Eric Berger <ericjberger at gmail.com>

Dear R-help, Here's a simple example of nonlinear curve fitting where nls seems to get the answer wrong on a very simple exponential fit (my R version 2.7.2). Look at this code below for a very basic curve fit using nls to fit to (a) a logarithmic and (b) an exponential curve. I did the fits using self-start functions and I compared the results with a more simple fit using a straight lm()

Hi, I have a system of ODE's I can solve with lsoda. Model=function(t,x,parms) { #parameter definitions lambda=parms[1]; beta=parms[2]; d = parms[3]; delta = parms[4]; p=parms[5]; c=parms[6] xdot[1] = lambda - (d*x[1])- (beta*x[3]*x[1]) xdot[2] = (beta*x[3]*x[1]) - (delta*x[2]) xdot[3] = (p*x[2]) - (c*x[3]) return(list(xdot)) } I want

Hi list, I'm trying to limit the z axis plotted using persp3d {rgl} to a given range. I'm trying the following statement persp3d(g0,pa,D, xlim=range(g0),ylim=range(pa), zlim=range (zbounds),col="lightblue") where g0 and pa are both a range of 20 numbers from 0.05 to 1, and D is a 20 x 20 matrix with values ranging from 0 to 30000. I'm trying to set a cap on the Z

Dear members, I'm getting an error with the "integrate" function. Searching in the r-help archives, I think this may have something to do with the function (it is not returning a vector but a number), but I don't see exactly what. The function to integrate was defined with a for loop first: for (i in 1:(nbcol-1)) {tdon1<-tdon[,i]

Hello, R experts I am a new user of rgl package. I want axis label to be parallel to the axis. However, I cannot find any options in package manual. Could you show me how to how to make label be parallel to crresponding axis. Especially, Z axis label, in case that it is long, protrudes out of the plot and invades the plot. Please, let me know. I spent every night and day of even a month. TK Kim

Hi all, I am learning R by "doing". And this is my first post. I want to use R: 1- to fetch a DNA sequence from a databank (see bellow) and 2- store it as FASTA file. The problem: neither an error is prompted nor the fasta file is created. Testing the code (see bellow), I notice that everything works until the *"write.dna" *command - which is not creating the fasta file.

Hello all, I use persp3d from the rgl-package to plot a sruface. The typical call is persp3d(x, y, z) With cooridinate-vectros x, y and a function-values matrix z. Now I have different z's, say z_1,...,z_n Question: Is it possible to generate an animation from a sequence of such calls, for different z's? I would like to see how the surface is beeing changed in the time. Thank you