similar to: hist function in a for loop

After upgrading from 2.6.28.10 to 2.6.29.3 I've saw following new errors in kernel log: May 12 14:46:41 falcon-cl5 May 12 14:46:41 falcon-cl5 (6757,7):ocfs2_read_locked_inode:466 ERROR: status = -22 Only one node is mounted volumes in cluster: /dev/sde on /home/apache/users/D1 type ocfs2 (rw,_netdev,noatime,heartbeat=local) /dev/sdd on /home/apache/users/D2 type ocfs2

Dear R community, I am new to R, a reforming SAS user :) I am running R 2.10.1 on a Windows XP machine. I would like to write linear functions of my coefficient parameter estimates from a glm, but am having a difficult time understanding the parameterization R uses. In the toy example below I am running a glm on binomial data, with clones and lines within clones as fixed effects, each with 6

My data looks like: A,B,C,D,Class 1,2,0,2,cl1 1,5,1,9,cl1 3,2,1,2,cl2 7,2,1,2,cl2 2,2,1,2,cl2 1,2,1,5,cl2 0,2,1,2,cl2 4,2,1,2,cl2 3,5,1,2,cl2 3,2,12,3,cl2 3,2,4,2,cl2 **The steps followed are: trainfile <- read.csv("TrainFile",head=TRUE) datatrain <- subset(trainfile,select=c(-Class)) classtrain <- (subset(trainfile,select=Class)) rf <- randomForest(datatrain, classtrain)

List, In order to get rid of some old, unreadable S3 code in package sp, I'm trying to rewrite things using S4 methods. Somewhere I fail, and I cannot sort out why. In order to isolate the problem, I created two functions, doNothing<- and dosth, and both should do nothing. The issue is that in most cases they do nothing, but in some cases dosth(obj) changes the class of obj and breaks with

Hi, I have generated a skyline plot of a tree in newick format using "ape". How can I plot the error bars for this graph? I only have the the tree data. un<-"((((8.1:0, 20.1:0):0, 6.1:3):123, (((((35.1:0, (22.1:0, (43.1:1, 29.1:0):0):0):4, 25.1:6):0, ((42.1:0, 21.1:0):3, (39.1:0, 2.1:0):3):1):8, (3.1:0, 7.1:0):8):48, (((((15.1:0, 14.1:0):0, 11.1:0):0, 37.1:0):0,

Hi all, I am using R trying to get a inverse matrix of (X^T)X , but I keep getting the error message like: no b argument and no default value for sprintf(gettext(fmt, domain = domain), ...) . -------------------------------------------------------------------------------------------- # my code X<-Matrix(rep(1,500),100,5) X[lower.tri(X)]<-1-10^-7 XtX<- t(X)%*% X XtXu<-lu(XtX)

Hi, ?I have a list of files in one of my working directories: "chr17.chunk1.dose.fvd" "chr17.chunk1.dose.fvi" "chr17.chunk1.prob.fvd"? "chr17.chunk1.prob.fvi"? ........... ......... ........ "chr17.chunk10.dose.fvd" "chr17.chunk10.dose.fvi" "chr17.chunk10.prob.fvd" "chr17.chunk10.prob.fvi" And I am

A new version of the 'snow' package for parallel computing in R is available at http://www.stat.uiowa.edu/~luke/R/cluster/snow_0.3-3.tar.gz This substantially revises the way in which worker processes are started to allow snow to be used on Windows and Mac/Windows/Linux combinations. I have successfully used the SOCK version on a standalone Windows machine and combinations of

I'm trying to create a histogram from the following code, but my data keeps adding the Num vector and plotting that. My data in the CSV file is just one vector. Does anyone know why? Thanks Conrad SPXdf = data.frame(read.csv(file = "SPX.csv", header = TRUE, sep = ",", dec = ".", fill = TRUE)) Max = max(SPXdf[,2]) Min = min(SPXdf[,2]) Count =

Within a function I'm assigning dynamic variable names and values to them using the "assign" function. I want to pass back the results but am uncertain how to do this. Basically, my function reads a number of data files and uses the filename of each file as the variable name for a list-to-become-dataframe. I want then to pass all these lists back, but again, the names of the

Hi, I'm turning my wheels on this and keep coming around to the same wrong solution - please have a look and give a hand ... The premise is: a DF like so > loremIpsum <- "Lorem ipsum dolor sit amet, consectetur adipiscing elit. Quisque leo ipsum, ultricies scelerisque volutpat non, volutpat et nulla. Curabitur consequat ullamcorper tellus id imperdiet. Duis semper malesuada

Dear all, I'm a newbie in R. I have a 45x2x2x8 design. A dataframe stores the metadata of trials. And each trial has its own data file: I used "read.table" to import every trial into R as a dataframe (variable). Now I dynamically ask R to retrieve trials that fit certain selection criteria, so I use "subset", e.g. tmptrialinfo <- subset(trialinfo, (Subject==24 &

Using RedHat Linux 7.0, R-1.2.2, R-hdf5-1.2 library, I want to load a dataset, do some stuff with it, then erase its objects, get an other, repeat. My friend wrote a function which tried to clear away all the objects. At the end, it uses rm() to remove objects. This is the same way we do it interactively, from the R prompt: testLoadSeveralHDF <- function(numFiles) { for (i in

Hi Being able to do object oriented programming in R is really good. I now started using the Reference Classes and really like it. Though, I have one problem: I cannot find a way to update a method on an existing object. The flexibility that scripting gives (really needed for interactive data analysis) is lost if everything have to be recalculated all the time. For example I would normally

I am trying to use knn to do a nearest neighbor classification. I tried using my dataset and got an error message so I used a simple example to try and understand what I was doing wrong and got the same message. Here is what I typed into R: try [,1] [,2] [,3] [,4] r "A" "A" "T" "G" r "A" "A" "T" "G" f

Hello all, A few years ago, I added the inalloca feature to LLVM IR so that Clang could be C++ ABI compatible with MSVC on 32-bit x86. The feature works, but there is room for improvement. I recently took the time to write up a design using token values that will hopefully be better named and easier to work with and around. For the technical details of the proposal, I've written up the RFC

I currently have a program that automates 2-way ANOVA on a series of endpoints, but before the ANOVA is carried out I want the code to test the assumptions of normality and equal variance and report along with each anova result in the output file.  How can I do this? I have pasted below the code that I currently use.   library(car) numFiles = x #

Hi! We operate a 2-node cluster running OCFS2 on top of DRBD. It shows about 4.3 GB free space on the OCFS2 filesystem using df on both nodes, but one node can't even write 10 MB: df (ouput identical on both the nodes) $ df -k /cluster Filesystem 1K-blocks Used Available Use% Mounted on /dev/drbd0 83883484 80071096 3812388 96% /cluster $ df -i /cluster

While trying to train randomForest with my dataset, I am ending up with the following error Error in randomForest.default(datatrain, classtrain) : length of response must be the same as predictors My data looks like: A,B,C,D,Class 1,2,1,2,cl1 1,2,1,2,cl1 3,2,1,2,cl2 3,2,1,2,cl2 3,2,1,2,cl2 3,2,1,2,cl2 3,2,1,2,cl2 3,2,1,2,cl2 3,2,1,2,cl2 3,2,12,3,cl2 3,2,1,2,cl2 Actual dataset has around 4000

Originally from https://github.com/markfasheh/duperemove/blob/master/btrfs-extent-same.c Signed-off-by: Gabriel de Perthuis <g2p.code+btrfs@gmail.com> --- .gitignore | 1 + Makefile | 2 +- btrfs-extent-same.c | 145 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 3 files changed, 147 insertions(+), 1 deletion(-) create mode 100644 btrfs-extent-same.c diff