similar to: Skyline CMS Release 3.0.8

Hi, I have generated a skyline plot of a tree in newick format using "ape". How can I plot the error bars for this graph? I only have the the tree data. un<-"((((8.1:0, 20.1:0):0, 6.1:3):123, (((((35.1:0, (22.1:0, (43.1:1, 29.1:0):0):0):4, 25.1:6):0, ((42.1:0, 21.1:0):3, (39.1:0, 2.1:0):3):1):8, (3.1:0, 7.1:0):8):48, (((((15.1:0, 14.1:0):0, 11.1:0):0, 37.1:0):0,

Dear all, Does anyone know how can one loop through the newick phylogenetic trees stored in a nexus file and generate an "average" skyline plot with coalescent intervals? I have managed to generate the plot with one tree, but is it possible to create that "consensus/average" plot in R? tr<-"((((8.1:0, 20.1:0):0, 6.1:3):123, (((((35.1:0, (22.1:0, (43.1:1,

Hi everyone, For those who have/had problems with Webrick not properly closing MySQL connections, there is a new MySQL gem. (Actually the version was released some time ago, just nobody took the time to make a gem) So run "gem update" or just "gem install mysql" to update (not sure if the latter also updates). Special thanks to Tobias Luetke, who forwarded the gem to Chad

Hi All, I''m currently looking into doing a bit of evented network programming in ruby and i''m currently looking into packet, eventmachine and rev. The problem is that I need to be able to fork and start a new reactor within the forked child (it also should open a socket and write status information back to the main process). I have not been able to do this with EventMachine.

Dear all, I am trying to create a consensus skyline plot using the "ape" package(newbie). I have a nexus file that looks like the one from above containing many trees. (my_file.trees) #NEXUS begin trees; [Treefile generated by sim_coal.exe (Laurent Excoffier)] tree true_tree_1 = [&U] (((13.1:6, 43.1:5):12, 28.1:14):284, (((((21.1:0, (20.1:1, 4.1:0):0):1, ((37.1:0,

Last night, I upgraded from 3.0.7 to 3.0.8. This morning, I got the call that most (not all) of the machine couldn't logon to the domain. This was in the logs for those workstations that couldn't login: [2004/11/12 07:04:02, 0, pid=3088, effective(65534, 65534), real(65534, 0)] rpc_server/srv_netlog_nt.c:get_md4pw(244) get_md4pw: Workstation SKYLINE-MIKEG$: no account in domain I

Hi All, I am creating on CMS application and there i am providing feature to create document. I have some issue about scalibilty in CMS: 1. How to make size limitation when user is going to create document. 2. How to make size limitation when user is uploading some documents. 3. How many documents can we create in CMS their is any limit?? 4. How to handle database scalability for CMS

Hi, Could Please tell me how can we use radiant CMS in our application. Is this radiant cms is famous for ROR? Is there any other way to create CMS ror application. Thank you, srinivas rao.pala -- Posted via http://www.ruby-forum.com/. --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk"

We are about to launch our public beta content management system. We wanted to address our work groups first to give you the opportunity to have first access and update content in the new CMS. Log into https://beta.linuxfoundation.org/collaborate/workgroups with your LF account. The same account you used for wiki. Click on your respective group and then click Join or Request Membership from the

We are about to launch our public beta content management system. We wanted to address our work groups first to give you the opportunity to have first access and update content in the new CMS. Log into https://beta.linuxfoundation.org/collaborate/workgroups with your LF account. The same account you used for wiki. Click on your respective group and then click Join or Request Membership from the

We are about to launch our public beta content management system. We wanted to address our work groups first to give you the opportunity to have first access and update content in the new CMS. Log into https://beta.linuxfoundation.org/collaborate/workgroups with your LF account. The same account you used for wiki. Click on your respective group and then click Join or Request Membership from the

Hi, I am looking into a new website, and a couple of potential designers have recommened using a CMS system built on Ruby on Rails ... one bespoke and one using a customised version of Refinery. Both have said that we will own all the coding, and so will in theory have the flexibility to host the sites anywhere. We are looking at hosting the site with a separate company, and I just wondered if

I put an article up on my Ruby on Rails blog that breaks down all of the known (that I''m aware of) CMS into feature lists and explains the current development situation as I see of it CMS w/ Rails. The blog url: http://rubyonrailsblog.com/ Article specific url: http://www.rubyonrailsblog.com/articles/2006/08/18/ruby-on-rails-cms-breakdown-do-they-all-stink FeedBurner:

I''m working on building out a CMS system on rails (which is making it much easier and enjoyable!). The CMS has multiple fields per page, and each page can have completely different fields from one and another. 90% of the pages will fit within a few different templates/views where the templates/views have all the HTML and then just insert the page fields in the appropriate spot (show

Hello all, I’m moving to Rails from another OO language where I’ve built my own extensive CMS systems - and I’m the kind of guy who learns by breaking things and figuring out why they broke. Strange method but true - I guess I’m just the impatient sort :) Since I’m most familiar with CMS architecture and multi-level user/group/authenicated access systems I thought it logical to start with a

Dear ALL, What are the experiences you have with various open source CMS products (Comparison of PHP-based CMS) such as (Drupal, Joomla, OpenCMS, Typo3, eZ publish ..etc.) Security, Bugs, Performance, Support, Developer Community, learning curve, appearance..etc Thanks -mu

A client has posed me the task of creating a CMS for a customer facing website using Ruby on Rails. Are there any such projects already underway? If not, is a basic CMS going to be too much for one developer to handle? (I can probably outsource a bit but the budget isn''t massive) The project is scheduled to last for 3 months and will probably involve some basic marketing pages,

We''ve just released our first in the RealApps series - a dead-simple CMS for Rails. It''s implemented as a plugin you can download, which then generates scaffolded code for administering your content. It''s designed to be a starter system for small sites, and of course you can build on it as you want. It''s also a good place to look if you want to see how

Hi! I''m author of MuraveyWeb, first open source Ruby on Rails CMS on the Earth :), which some of you may know. Last year I had a lot of Rails work and was very busy with all kinds of commercial projects, so I apologize to all who had no tech support or new releases from me. That''s entirely my fault, but I hope you''ll understand me. I was creating MuraveyWeb to

Hello Rails-list, I''m working on a CMS in Rails. The company that I work for currently uses a CMS written in PHP, and I want to mimick it in Rails, and improve along the way. The PHP variant works with templates like this: In the root of the webdir, there are the template files, named cms_news.html for example. This page contains custom tags, in the form of definitions and