Displaying 20 results from an estimated 800 matches similar to: "has_many :through with a has_one source"
2010 Jan 12
1
Strange behavior when trying to piggyback off of "fitdistr"
Hello.
I am not certain even how to search the archives for this particular question, so if there is an obvious answer, please smack me with a large halibut and send me to the URLs.
I have been experimenting with fitting curves by using both maximum likelihood and maximum spacing estimation techniques. Originally, I have been writing distribution-specific functions in 'R' which work
2007 Nov 13
1
TRUNCATED error with data frame
Hi ,
I am new to R.
I am trying to run a simple R script as shown below:
aov.R
------
data1<-c(49,47,46,47,48,47,41,46,43,47,46,45,48,46,47,45,49,44,44,45,42,45,45,40
,49,46,47,45,49,45,41,43,44,46,45,40,45,43,44,45,48,46,40,45,40,45,47,40)
matrix(data1, ncol= 4, dimnames = list(paste("subj", 1:12),
c("Shape1.Color1",
"Shape2.Color1", "Shape1.Color2",
2011 Jul 29
1
How to interpret Kolmogorov-Smirnov stats
Hi,
Interpretation problem ! so what i did is by using the:
>fit1 <- fitdist(vectNorm,"beta")
Warning messages:
1: In dbeta(x, shape1, shape2, log) : NaNs produced
2: In dbeta(x, shape1, shape2, log) : NaNs produced
3: In dbeta(x, shape1, shape2, log) : NaNs produced
4: In dbeta(x, shape1, shape2, log) : NaNs produced
5: In dbeta(x, shape1, shape2, log) : NaNs produced
6: In
2012 Mar 15
2
Integrate inside function
Dear R users,
first I take this opportunity to greet all the R community for your
continuous efforts.
I wrote a function to calculate the pdf and cdf of a custom distribution
(mixed gamma model).
The function is the following:
pmixedgamma3 <- function(y, shape1, rate1, shape2, rate2, prev)
{
density.function<-function(x)
{
shape1=shape1
rate1=rate1
shape2=shape2
2011 Aug 01
3
Beta fit returns NaNs
Hi,
sorry for repeating the question but this is kind of important to me and i
don't know whom should i ask.
So as noted before when I do a parameter fit to the beta distr i get:
fitdist(vectNorm,"beta");
Fitting of the distribution ' beta ' by maximum likelihood
Parameters:
estimate Std. Error
shape1 2.148779 0.1458042
shape2 810.067515 61.8608126
Warning
2020 Mar 26
0
unstable corner of parameter space for qbeta?
>>>>> Ben Bolker
>>>>> on Wed, 25 Mar 2020 21:09:16 -0400 writes:
> I've discovered an infelicity (I guess) in qbeta(): it's not a bug,
> since there's a clear warning about lack of convergence of the numerical
> algorithm ("full precision may not have been achieved"). I can work
> around this, but I'm
2018 Jul 12
2
Problemas con la funcion "apply"
Buenos dias!
Os escribo para ver si me podeis ayudar con un asunto en el que me he quedado un poco encallado.
Lo que tengo que hacer es sacar los percentiles (0.001, 0.005, 0.95 y 0.999) de varias distribuciones beta, concretamente 418. Cada distribucion esta definida por los parametros "shape1" y "shape2". Por lo tanto tengo una base de datos de 418 filas y en cada una de
2009 Jul 01
1
Plot cumulative probability of beta-prime distribution
Hallo,
I need your help.
I fitted my distribution of data with beta-prime, I need now to plot the
Cumulative distribution. For other distribution like Gamma is easy:
x <- seq (0, 100, 0.5)
plot(x,pgamma(x, shape, scale), type= "l", col="red")
but what about beta-prime? In R it exists only pbeta which is intended only
for the beta distribution (not beta-prime)
This is
2020 Oct 24
0
Fitting Mixed Distributions in the fitdistrplus package
Dear Charles,
Please, when you have questions about fitdistrplus, contact directly the authors of the package and not R-help.
When fitting non ? standard ? distributions with fitdistrplus, you should define by yourself the density and the cumulative distribution functions, or load a package which define them.
See FAQ for a general example :
2006 Jul 04
1
problem getting R 2.3.1 svn r38481 to pass make check-all
Hi,
I noticed this problem on my home desktop running FC4 and again on my
laptop running FC5. Both have previously compiled and passed make
check-all on 2.3.1 svn revisions from 10 days ago or so. On both these
machines, make check-all is consistently failing (4 out of 4 attempts on
the FC 4 desktop and 3 out of 3 on the FC 5 laptop) in the
p-r-random-tests tests. This is with both default
2020 Mar 26
4
unstable corner of parameter space for qbeta?
I've discovered an infelicity (I guess) in qbeta(): it's not a bug,
since there's a clear warning about lack of convergence of the numerical
algorithm ("full precision may not have been achieved"). I can work
around this, but I'm curious why it happens and whether there's a better
workaround -- it doesn't seem to be in a particularly extreme corner of
parameter
2007 May 03
1
Bayesian logistic regression with a beta prior (MCMClogit)
Dear all,
I am trying to use the logistic regression with MCMClogit (package:
MCMCpack/Coda) and I want to put a beta prior on the parameters, but it's
giving me error message (please see output below) no matter what shape 1 or
2 I use. It works perfect with the cauchy or normal priors. Do you know if
there is a catch there somewhere? Thanks
logpriorfun <- function(beta,shape1,shape2){
2020 Mar 26
2
unstable corner of parameter space for qbeta?
Given that a number of us are housebound, it might be a good time to try to
improve the approximation. It's not an area where I have much expertise, but in
looking at the qbeta.c code I see a lot of root-finding, where I do have some
background. However, I'm very reluctant to work alone on this, and will ask
interested others to email off-list. If there are others, I'll report back.
2003 Jul 04
1
Problem with fitdistr for beta
I have the following problem:
I have a vector x of data (0<x<=1 ) with
a U-shaped histogram and try to fit a beta
distribution using fitdistr. In fact,
hist(rbeta(100,0.1,0.1)) looks a lot like
my data.
The equivalent to
the example in the manual
sometimes work:
> a <- rbeta(100,0.1,0.1)
> fitdistr(x=a, "beta", start=list(shape1=0.1,shape2=0.1))1)
> shape1
2013 Sep 18
1
dbeta may hang R session for very large values of the shape parameters
Dear all,
we received a bug report for betareg, that in some cases the optim call in betareg.fit would hang the R session and the command cannot be interrupted by Ctrl-C?
We narrowed down the problem to the dbeta function which is used for the log likelihood evaluation in betareg.fit.
Particularly, the following command hangs the R session to a 100% CPU usage in all systems we tried it (OS X
2012 Aug 27
3
How to generate a matrix of Beta or Binomial distribution
Hi folks,
I have a question about how to efficiently produce random numbers from Beta
and Binomial distributions.
For Beta distribution, suppose we have two shape vectors shape1 and shape2.
I hope to generate a 10000 x 2 matrix X whose i th rwo is a sample from
reta(2,shape1[i]mshape2[i]). Of course this can be done via loops:
for(i in 1:10000)
{
X[i,]=rbeta(2,shape1[i],shape2[i])
}
However,
2003 Dec 10
0
configure stuck in checking leap seconds (R-1.8.1 on AIX)
Dear R-help,
We've been trying, so far unsuccessfully, to compile R as 64-bit under AIX
5.1. Following the recent post by Dr. Christoph Pospiech, I started with
R-1.8.1 and manually edited the configure script according to the .diff
file. Part of the diff has:
***************
*** 24446,24452 ****
int main () {
struct tm *tm;
! time_t ct;
ctime(&ct);
ct = ct - (ct
2020 Mar 26
0
unstable corner of parameter space for qbeta?
This is also strange:
qbeta <- function (p, shape1, shape2, ncp = 0, lower.tail = TRUE, log.p = FALSE)
{
if (missing(ncp))
.Call(C_qbeta, p, shape1, shape2, lower.tail, log.p)
else .Call(C_qnbeta, p, shape1, shape2, ncp, lower.tail,
log.p)
}
Since the default value is 0 for non-centrality, it seems like the logic above is wrong. When ncp=0, C_qnbeta would be called
2013 May 14
2
invalid operands of types ‘SEXPREC*’ and ‘R_len_t’ to binary ‘operator/’ with Rcpp.
Dear R-Developers,
I just started learning how to use Rcpp. Earlier while using it, I
encountered an error as shown below:
file74d8254b96d4.cpp: In function ‘Rcpp::NumericVector
foo(Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector,
Rcpp::Function, Rcpp::Function)’:
file74d8254b96d4.cpp:10: error: invalid operands of types ‘SEXPREC*’ and
‘R_len_t’ to binary ‘operator/’
make: ***
2011 Apr 07
2
Two functions as parametrs of a function.
Hi R users:
I'm trying to make a function where two of the parameters are
functions, but I don't know how to put each set of parameters for
each function.
What am I missing?
I try this code:
f2<-function(n=2,nsim=100,fun1=rnorm,par1=list(),fun2=rnorm,par2=list()){
force(fun1)
force(fun2)
force(n)
p1<-unlist(par1)
p2<-unlist(par2)
force(p1)
force(p2)