similar to: all.vars for nested expressions

Hello... I just installed R version 1.4.0 on my laptop running Redhat Linux 7.1. I downloaded the RPM from CRAN and when I try to use a function I have used on other Redhat systems, I get the following error message. -------- > library(qtl) > gastritis <- read.cross(format="csv",dir="/home/sen/qtl/data/gastritis", +

Hello... I tried to compile an R addon package, R/qtl on a Solaris machine and I get this error. I know that R/qtl complies correctly on other platforms (Windows, Mac, Linuxes, etc), so I am wondering what the problem might be. Any ideas? Thanks, Saunak ----------------------------------- /export/home/sen/tmp <howrahbridge> <pts/5> R INSTALL

Hi, I have a question about the computation of confidence intervals in the zyp package, in particular using the functions zyp.sen and confint.zyp, or zyp.yuepilon. (1) I'm a bit confused about the confidence intervals given by zyp.sen and confint.zyp. When I request a certain confidence interval in the function, the R output seems to deliver another confidence interval, e.g. when I set

Hi All, I have tried every fix on my try or tryCatch that I have found on the internet, but so far have not been able to get my R code to continue with the "for loop" after the lmer model results in an error. Here is two attemps of my code, the input is a 3D array file, but really any function would do.... metatrialstry<-function(mydata){ a<-matrix(data=NA, nrow=dim(mydata)[3],

Clang does indeed built it with one warning. [ 55%] Building C object lib/CMakeFiles/CompilerRT-Common.dir/gcc_personality_v0.c.o /export/home/edward/lab/llvm/build/compiler-rt/lib/gcc_personality_v0.c:232:36: warning: implicit declaration of function '__builtin_eh_return_data_regno' is invalid in C99 [-Wimplicit-function-declaration] _Unwind_SetGR(context,

No, As it worked fine before. I can't see the #if that goes with +#elif defined(__WIN32__) as you removed -#if TARGET_OS_MAC. Please go over your #if / #endif blocks and trail the #endif with a comment. I am willing to bet there is a problem there. Thanks for your time, Edward. 2009/9/23 Shantonu Sen <ssen at apple.com>: > Sounds like your system compiler doesn't support

Hello R helpers, I would like to automate this code for many files of the same type. But I don´t know how to make it. In particular, i don´t know how to read many files each one as an r object with the name of the file. Then a for loop would be sufficient, right? Many thanks and a happy new year. Dominic datos <- read.table('global2001.csv',head=T,sep=';',stringsAsFactors=F)

Seems pretty clear cut to me. #if defined(HAVE_OSATOMIC_COMPARE_AND_SWAP_INT) && defined (HAVE_OSATOMIC_COMPARE_AND_SWAP_LONG) ... #elif defined(__WIN32__) ... #elif defined(HAVE_SYNC_BOOL_COMPARE_AND_SWAP_INT) && defined (HAVE_SYNC_BOOL_COMPARE_AND_SWAP_LONG) ... #else #error unknown atomic compare-and-swap primitive #endif The problem isn't mismatched #if/#endif. The

Breaks Builds on Solaris and AuroraUX with: bash-3.2$ make Scanning dependencies of target BlocksRuntime [ 1%] Building C object BlocksRuntime/CMakeFiles/BlocksRuntime.dir/runtime.c.o /export/home/edward/lab/llvm/build/compiler-rt/BlocksRuntime/runtime.c:77:2: error: #error unknown atomic compare-and-swap primitive /export/home/edward/lab/llvm/build/compiler-rt/BlocksRuntime/runtime.c: In

Hi everyone: I have been struggling with this repeated data type for whole afternoon,I sent two emails to server for help,many people kindly responded , hereby thank you so much,but since I dont want to write to much in email,so I divide the problem in parts,so far this seem did not work out very well,so this is my whole problem~ first I have example of data here:

Hello, I have data in a dataframe with 139104 rows which is multiple of 96x1449. i have a phenotype file which contains the phenotype information for the 96 samples. the snp name is repeated 1449X96 samples. I haveto merge the two dataframes based on sid and sen. this is how my two dataframes look like dat<-data.frame(snpname=rep(letters[1:12],12),sid=rep(1:12,each=12),

Sounds like your system compiler doesn't support gcc-style builtin atomics. Please use a different compiler? Shantonu Sent from my MacBook On Sep 22, 2009, at 7:54 PM, Edward O'Callaghan wrote: > Breaks Builds on Solaris and AuroraUX with: > > bash-3.2$ make > Scanning dependencies of target BlocksRuntime > [ 1%] Building C object

Dear all, I would like to share a paper I co-authored with Prof. Alper Sen. This paper describes an algorithm to generate testbenches from SystemC models represented with LLVM IR. It was accepted and presented at International Conference on Hardware/Software Codesign and System Synthesis (CODES/ISSS), 2012. A link to the paper is accessible from acm or Alper's website:

I'm confused. libLTO takes bitcode files as input and creates a native object file as output. Why would libLTO create bitcode as output? If so, you're changing the existing API contract. Or are you creating an out-of-band bitcode file, in which case the linker would never see it. ld doesn't have bitcode support, it has libLTO support, and libLTO is what processes the bitcode.

Hello, I am making some use of ROC curve analysis. I find much help on the mailing list, and I have used the Area Under the Curve (AUC) functions from the ROC function in the bioconductor project... http://www.bioconductor.org/repository/release1.5/package/Source/ ROC_1.0.13.tar.gz However, I read here... http://www.medcalc.be/manual/mpage06-13b.php "The 95% confidence interval for

Dear R-gurus, I know that it is not a R problem, but as need to implement some solution for this on R, I would like to know if someone help me on how to isolate X on the expression below. K=(sen A * sen B ) + ( cos A * cos B * cos ( X - Y ) ) Any help are welcome mitinho astronauta brazil [[alternative HTML version deleted]]

Hi, Here is an updated version of the patch using address space 257. Zoltan On Mon, May 4, 2009 at 11:36 PM, Shantonu Sen <ssen at apple.com> wrote: > Maybe 257 would be better (or other unused), because of r70197, which gives > special behavior for <256 > > Shantonu Sen > ssen at apple.com > > Sent from my Mac Pro > > > On May 4, 2009,

In the file MkRules.local.in, I see the line: USE_ATLAS = NO which I believe needs to be changed to YES. But how do I specify the BLAS file *libopenblas_haswell-r0.2.20.a *and its location? Regards, Indrajit On Tue, Feb 13, 2018 at 6:41 PM, Indrajit Sen Gupta <indrajitsg at gmail.com> wrote: > I was able to compile the R from the github by running build-r-devel.bat! > > Now need

Hi, this post is about foreach operators, the compiler package and the last update of doMC that includes support for the compiler functionality. I am using a home-made %dopar%-like operator that adds some custom expression to be executed before the foreach loop expression itself (see sample code below). It used to work perfectly with doMC 1.2.1, but with the introduction of the compiler

Dear R Users, close to the end of this I used wireframe to create a 3D plot from a matrix. The x and y axis tick labels (1-6) for each were created from the matrix being a 6X6 matrix. I need the axis tick labels to be the row and column headings which you can see in the output (mat.x). I have tried several work arounds, but they have not been successful. Thanks in advance. keith rm(list=ls())